Training materials
Target audience: Students
and Authors: Aidan Budd or Alexandre Cormier or Anton Nekrutenko or Jessica Kirkpatrick krkptrc2@illinois.edu or Michelle Brazas or Saskia Lawson-Tovey
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hands-on tutorial
Versioning your code and data with git
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
A (very) brief history of genomics
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Very Short Introductions: QC
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
IGV Introduction
• beginnerIntroduction to Galaxy Analyses -
slides
A brief history of modern biology
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Hands-on for 'Comparative gene analysis in unannotated genomes' tutorial
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Calling variants in non-diploid systems' tutorial