Training materials
Authors: Aidan Budd or Alex Ostrovsky or Maria Levchenko or Tuur Muyldermans or Vasundra Touré or Wolfgang Maier or stortebecker
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
hands-on tutorial
Hands-on for 'Pox virus genome analysis from tiled-amplicon sequencing data' tutorial
••• advancedvariant-analysis virology one-health -
hands-on tutorial
Hands-on for 'Avian influenza viral strain analysis from gene segment sequencing data' tutorial
•• intermediatevariant-analysis virology -
hands-on tutorial
Hands-on for 'Somatic Variant Discovery from WES Data Using Control-FREEC' tutorial
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Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
hands-on tutorial
Hands-on for 'Mapping and molecular identification of phenotype-causing mutations' tutorial
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hands-on tutorial
Hands-on for 'Exome sequencing data analysis for diagnosing a genetic disease' tutorial
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hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediatevariant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'Identification of somatic and germline variants from tumor and normal sample pairs' tutorial
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hands-on tutorial
Hands-on for 'Trio Analysis using Synthetic Datasets from RD-Connect GPAP' tutorial