Training materials
Authors: @posit-pbc or Bazante Sanders or Canadian Bioinformatics Workshops or Egon Willighagen or Jessica Kirkpatrick krkptrc2@illinois.edu or Matthias Fahrner or Pavankumar Videm or Simon Gladman
-
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
slides
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics -
slides
Reference Genomes in Galaxy
• beginnerGalaxy Server administration -
slides
Galaxy Monitoring
• beginnerGalaxy Server administration -
slides
Galaxy on the Cloud
• beginnerGalaxy Server administration -
slides
uWSGI
• beginnerGalaxy Server administration -
wesm/pydata-book
-
Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
wch/rgcookbook
-
bioinformatics-ca/AUR_2021