Tutorial
Microbiome Analysis of Amplicon Sequencing
In a coral associated microbiome dataset, where we have two different coral species (with one incipient speciation) and two different reproductive strategies, we want to address the following scientific questions:
- Is the microbiome of these cold-water corals species-specific?
- Is the microbiome related to the reproductive strategy?
- Or is the microbiome shaped by both factors?
DOI: https://doi.org/10.5281/zenodo.16530108
Licence: MIT License
Contact: Tania Aires: taires@ualg.pt
Keywords: Qiime2, Microbiome, amplicon, 16S
Target audience: life science researchers, Bioinformatician, Bioanalysts
Resource type: Tutorial
Version: 1.0.0
Status: Active
Prerequisites:
Qiime2
Learning objectives:
Introduce basic concepts to preprocess (QIIME2) and analyse (MicrobiomeAnalyst) microbiome data, in particular bacteria associated with cold-water corals.
Date created: 2025-05-07
Date modified: 2025-06-02
Date published: 2025-08-07
Activity log
