Material provided by Charlotte Soneson

Material provided by Charlotte Soneson

Keywords

RNA-Seq, Differential-expression, Statistical-model, Exploratory-analysis

Authors

Top | Keywords | Authors | Description | Aims | Prerequisites | Target audience | Learning objectives | Materials | Data | Technical requirements | Literature references

Description

This folder contains material provided by Charlotte Soneson. The following material is included:

Lecture on differential expression analysis
Lecture on downstream/exploratory analysis and gene set analysis

Aims

The aim of each material is outlined in the corresponding markdown file.

Top | Keywords | Authors | Description | Aims | Prerequisites | Target audience | Learning objectives | Materials | Data | Technical requirements | Literature references

Prerequisites

  • The prerequisites of each material are outlined in the corresponding markdown file.

Target audience

  • The target audience of each material is outlined in the corresponding markdown file.

Learning objectives

  • The learning objectives of each material are outlined in the corresponding markdown file.

Top | Keywords | Authors | Description | Aims | Prerequisites | Target audience | Learning objectives | Materials | Data | Technical requirements | Literature references

Materials

  • Lecture slides on differential expression analysis
  • Lecture slides on downstream/exploratory analysis and gene set analysis

Data

### Description
The Bottomly data set (downloaded from ReCount) is used to create some of the slides.

Availability

Top | Keywords | Authors | Description | Aims | Prerequisites | Target audience | Learning objectives | Materials | Data | Technical requirements | Literature references

Technical requirements

  • R
  • Bioconductor

Literature references

Not applicable

Top | Keywords | Authors | Description | Aims | Prerequisites | Target audience | Learning objectives | Materials | Data | Technical requirements | Literature references

Scientific topics: RNA-Seq

Keywords: RNA-Seq, Differential-expression, Statistical-model, Exploratory-analysis

Authors: Charlotte Soneson @charlotte, charlottesoneson@gmail.com

Material provided by Charlotte Soneson https://tess.elixir-europe.org/materials/material-provided-by-charlotte-soneson This folder contains material provided by Charlotte Soneson. The following material is included: RNA-Seq RNA-Seq, Differential-expression, Statistical-model, Exploratory-analysis