Training materials, Course materials

Linux commands and Genomics data formats for biologists

Short course for learning common genomics data formats (FASTA, FASTQ, GTF, BED, SAM/BAM), establishing a computational project's folder structure and navigation, and gaining proficiency in exploring, parsing, and manipulating these files using essential Linux commands

Contact: biocore@crg.eu

Keywords: FASTA, FASTQC, GTF, ChIP-Seq, Genome browser

Target audience: Biologists with little or no prior computational experience

Resource type: Training materials, Course materials

Status: Active

Prerequisites:

Introduction to the Linux terminal

Date created: 2025-10-23

Date published: 2025-10-23

Authors: Luca Cozzuto, Toni Hermoso Pulido

Contributors: Julia Ponomarenko

Scientific topics: Genomics, Bioinformatics

External resources:

Activity log