Introduction to NGS and RNA-seq

Introduction to NGS and RNA-seq

Keywords

HTS-introduction, Data-format, Alignment, Differential-expression, Feature-summarisation, QC

Details

### Venue
Plant Systems Biology
October 27th, 2014

Organisation

  • Plant Systems Biology
  • Frederik Coppens (@frcop)

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Global learning objectives

  • Identify which platforms are appropriate for your application
  • Discuss the features of data formats, focussing on FastQ files and alignment files
  • list steps of an RNA-seq analysis
  • discuss choices to be made in the different steps of the RNA-seq analysis

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Content

  1. Introduction to platforms
  2. Introduction to file formats
  3. RNA-seq data analysis.

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Data

### Original data:
not applicable

Protocol:

not applicable

Subset:

not applicable

Links

not applicable

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Keywords: HTS-introduction, Data-format, Alignment, Differential-expression, Feature-summarisation, QC

Introduction to NGS and RNA-seq https://tess.elixir-europe.org/materials/introduction-to-ngs-and-rna-seq No description available HTS-introduction, Data-format, Alignment, Differential-expression, Feature-summarisation, QC