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  4. Module: Genome annotation

Topic

Module: Genome annotation

The generated contigs can be annotated to detect genes, potential plasmids, etc. This will help the AMR gene detection process, especially the verification and visualization

Time estimation: 3 hours

Learning objectives:

  • Run a series of tool to annotate a draft bacterial genome for different types of genomic components
  • Evaluate the annotation
  • Process the outputs to formate them for visualization needs
  • Visualize a draft bacterial genome and its annotations

Keywords

gmod, illumnina, bacteria, microgalaxy

Owner

philreeddata (Phil Reed)
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    Bacterial Genome Annotation

    • beginner
    Genomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod …
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TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.