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26 events found

Node: Portugal  or Switzerland  or Sweden 

  • "Ready for BioData Management?" Data Stewardship program for the life sciences

    21 February - 31 October 2022

    Oeiras, Portugal

    "Ready for BioData Management?" Data Stewardship program for the life sciences https://tess.elixir-europe.org/events/ready-for-biodata-management-data-stewardship-program-for-the-life-sciences BioData.pt | ELIXIR Portugal, in collaboration with several other organizations has designed a program to train the first generation of Data Stewards for the life sciences, to support the implementation of data management, open science and FAIR data principles in Portuguese R&I organizations. It will unfold from February to October 2022, allowing trainees get some practice and consolidate the acquired knowledge. It will comprise an introductory module covering the basic concepts of Data Stewardship followed by two assignments and end with a hands-on course for knowledge consolidation. 2022-02-21 09:00:00 UTC 2022-10-31 17:00:00 UTC BioData.pt | ELIXIR Portugal Online and F2F (See details in training documentation), Oeiras, Portugal Online and F2F (See details in training documentation) Oeiras Portugal FAIR data Data submission, annotation, and curation Bioinformatics Data management Biodata.pt - Elixir's portuguese node of the european projec info@biodata.pt ELIXIR Life Science Researchers 24 workshops_and_courses registration_of_interest data managementData management plandata stewardshipdata annotationlife sciencestraining
  • CPANG22 - Computational Pangenomics

    23 - 27 May 2022

    Oeiras, Portugal

    Elixir node event
    CPANG22 - Computational Pangenomics https://tess.elixir-europe.org/events/cpang22-computational-pangenomics 2022-05-23 09:30:00 UTC 2022-05-27 18:00:00 UTC Pedro Fernandes Oeiras, Portugal Oeiras Portugal 2780-156 Genomics Instituto Gulbenkian de Ciência bicourses@igc.gulbenkian.pt Oeiras Valley Bioinformaticians and wet-lab biologists who can program in Perl. 20 workshops_and_courses registration_of_interest Computational Pangenomics
  • Introduction to Glycoinformatics - lectures and practicals - streamed

    30 - 31 May 2022

    Streamed from Geneva, Switzerland

    Elixir node event
    Introduction to Glycoinformatics - lectures and practicals - streamed https://tess.elixir-europe.org/events/introduction-to-glycoinformatics-lectures-and-practicals-streamed This course will be streamed only for registered participants. Overview The word glycoprotein is often used yet the “glyco” part is hardly ever described. 2022-05-30 09:00:00 UTC 2022-05-31 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to Glycoinformatics - lectures - streamed

    30 - 31 May 2022

    Streamed from Geneva, Switzerland

    Elixir node event
    Introduction to Glycoinformatics - lectures - streamed https://tess.elixir-europe.org/events/introduction-to-glycoinformatics-lectures-streamed-60ee2d1f-f02a-41e5-b067-0d7381880e71 This course will be streamed only for registered participants. Overview The word glycoprotein is often used yet the “glyco” part is hardly ever described. 2022-05-30 09:00:00 UTC 2022-05-31 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Intermediate Python

    3 June 2022

    Bern, Switzerland

    Elixir node event
    Intermediate Python https://tess.elixir-europe.org/events/intermediate-python-c512cb9a-2e2c-45b7-a7a0-77bda8569003 Overview Python is an open-source and general-purpose scripting language which runs on all major operating systems. It was designed to be easily read and written with comparatively simple syntax. 2022-06-03 09:00:00 UTC 2022-06-03 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • RaukR

    13 - 18 June 2022

    Elixir node event
    RaukR https://tess.elixir-europe.org/events/raukr #training #url:https://nbisweden.github.io/workshop-RaukR-2206/  2022-06-13 09:00:00 UTC 2022-06-18 00:00:00 UTC [] nina.norgren@scilifelab.se [] [] [] [] #trainingtraining
  • Introduction to Machine Learning with Python

    16 - 17 June 2022

    Lausanne or streamed, Switzerland

    Elixir node event
    Introduction to Machine Learning with Python https://tess.elixir-europe.org/events/introduction-to-machine-learning-with-python-c778fea7-fbc6-4a51-8aae-276118a6ce62 Overview With the rise of new technologies, the volume of omics data in the fields of biology and medicine has grown exponentially in recent times and a major issue is to mine useful predictive knowledge from these data. 2022-06-16 09:00:00 UTC 2022-06-17 00:00:00 UTC SIB, Lausanne or streamed, Switzerland SIB Lausanne or streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to statistics with Python

    20 - 21 June 2022

    Basel, Switzerland

    Elixir node event
    Introduction to statistics with Python https://tess.elixir-europe.org/events/introduction-to-statistics-with-python-678b7cea-fec0-446f-8636-22e186bcde23 Overview Statistics are an integral aspect of scientific research, particularly for the life sciences which rely heavily on quantitative methodologies. 2022-06-20 09:00:00 UTC 2022-06-21 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Enrichment Analysis - streamed

    24 June 2022

    Streamed, Switzerland

    Elixir node event
    Enrichment Analysis - streamed https://tess.elixir-europe.org/events/enrichment-analysis-streamed-0241e7fb-7026-4dc8-bde8-e76da5716df0 Overview Experiments designed to quantify gene expression often yield hundreds of genes that show statistically significant differences between two classes (two biological states, two phenotype states, two experimental conditions, etc). 2022-06-24 09:00:00 UTC 2022-06-24 00:00:00 UTC SIB, Streamed, Switzerland SIB Streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to openBIS

    27 June 2022

    Lausanne or streamed, Switzerland

    Elixir node event
    Introduction to openBIS https://tess.elixir-europe.org/events/introduction-to-openbis-e75d4225-486a-4c90-a175-0e470d2a6434 Overview This course provides a general overview of openBIS, followed by a practical training session. openBIS is a combined data management platform, Electronic Laboratory Notebook, and Inventory Management System. 2022-06-27 09:00:00 UTC 2022-06-27 00:00:00 UTC SIB, Lausanne or streamed, Switzerland SIB Lausanne or streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Summer School on Genetic Epidemiology

    29 June - 2 July 2022

    Davos, Switzerland

    Elixir node event
    Summer School on Genetic Epidemiology https://tess.elixir-europe.org/events/summer-school-on-genetic-epidemiology Overview This summer school aims at providing guidelines on optimal practice in designing, analyzing, and interpreting genetic epidemiological studies, for those who would like to actively analyze DNA sequencing from whole genome sequencing or whole 2022-06-29 09:00:00 UTC 2022-07-02 00:00:00 UTC SIB, Davos, Switzerland SIB Davos Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Research Data Management and Data Management Plan

    30 June - 1 July 2022

    Bern or Lausanne, Switzerland

    Elixir node event
    Research Data Management and Data Management Plan https://tess.elixir-europe.org/events/research-data-management-and-data-management-plan Overview Recent studies have shown that worldwide, between 51% and 89% of published life sciences research is not reproducible, with consequent losses estimated at around $100 billions/year in biomedical research (Chalmers et al., 2009; Freedman 2022-06-30 09:00:00 UTC 2022-07-01 00:00:00 UTC SIB, Bern or Lausanne, Switzerland SIB Bern or Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Single-cell Transcriptomics

    4 - 6 July 2022

    Bern, Switzerland

    Elixir node event
    Single-cell Transcriptomics https://tess.elixir-europe.org/events/single-cell-transcriptomics-be70d45c-e4dd-4319-866d-d0c192c60ccf Overview In contrast to the Bulk RNA sequencing used to quantify the abundance of gene and transcript expression at a whole population level, single-cell RNA sequencing (scRNAseq) allows researchers to study gene expression profile at a single cell 2022-07-04 09:00:00 UTC 2022-07-06 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Advanced Statistics: Statistical Modelling

    22 - 25 August 2022

    Lausanne, Switzerland

    Elixir node event
    Advanced Statistics: Statistical Modelling https://tess.elixir-europe.org/events/advanced-statistics-statistical-modelling-dc58174b-c34c-468a-a484-1fa4c7ed7957 Overview While the statistical models and tools presented in an introductory statistics course (such as linear regression) can be used to answer a wide range of questions in life sciences, many types of data can not be analyzed using these simple 2022-08-22 09:00:00 UTC 2022-08-25 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Integrative structural biology course

    22 August - 2 October 2022

    Lund, Gothenburg, Stockholm, Sweden

    Elixir node event
    Integrative structural biology course https://tess.elixir-europe.org/events/integrative-structural-biology-course Deadline for application: 23rd of May: https://www.lyyti.fi/reg/Integrative_Structural_Biology_Course_3770 The two week course is a joint effort between the three large-scale research infrastructures SciLifeLab, MAX IV and ESS and additional related platforms. The aim is to give an overview of the structural biology available at the research infrastructures in Sweden. The course will focus on understanding the sample requirements, the nature of structural information that can be obtained and how data from multiple structural biology methods can be combined using e.g. computational chemistry techniques. The course consists of lectures, key note speakers, modelling practicals and facility visits. In addition events allowing time for networking within the group of students, the teachers and other infrastructure personnel, contributing to an expanded professional network. Technologies/methods: *Macromolecular X-ray and neutron crystallography *Small angle X-ray and neutron scattering *Cryo-electron microscopy *Macromolecular nuclear magnetic resonance spectroscopy *Structural mass spectrometry *Modelling and Computational methods *Biophysical characterization Keynote speakers: We proudly present a number of exciting keynote speakers that will present scientific examples of how integrative structural biology techniques can be used to solve intriguing questions. Professor Poul Nissen, Aarhus University Professor Carmen Domene, University of Bath Postdoctoral researcher Hanna Barriga, Karolinska university Also we will be able to join in on the SciLifeLab “Annual lecture on Structural Biology” where Demis Hassabis will talk on using AI to accelerate scientific discovery. Lessons on modelling/computational methods: We will have several lectures on modelling and computational techniques for structural biology. Associate professor Lucie Delemotte, Integrating physics-based and evolutionary modelling to investigate the conformational dynamics of membrane proteins Professor Gunnar von Heijne, Different approaches to the study of cotranslational protein folding Professor Erik Lindahl, titel tbd Principal Research Engineer Claudio Mirabello, The protein structure prediction problem: from Anfinsen to AlphaFold. 2022-08-22 09:00:00 UTC 2022-10-02 17:00:00 UTC Infralife Onsite on three different locations across Sweden where the Swedish national Research Infrastructures, MaxIV, SciLifeLab and ESS are coming together to deliver a course on structural biology. The course will be held in Sweden, on site, between Aug 22 and Sept 2nd 2022. *Lund, 22 to 25 Aug *Gothenburg, 26 Aug *Stockholm, 29 Aug to 2 Sep, Lund, Gothenburg, Stockholm, Sweden Onsite on three different locations across Sweden where the Swedish national Research Infrastructures, MaxIV, SciLifeLab and ESS are coming together to deliver a course on structural biology. The course will be held in Sweden, on site, between Aug 22 and Sept 2nd 2022. *Lund, 22 to 25 Aug *Gothenburg, 26 Aug *Stockholm, 29 Aug to 2 Sep Lund, Gothenburg, Stockholm Sweden Sweden Sweden Structural biology Infralife Josefin Lundgren (Infralife coordinator), josefin.lundgren@scilifelab.se This InfraLife integrative structural biology course is organized with funding support from the Swedish research council, Lif, Excillum, NBIS, Xenocs, SwedNMR, Bruker and CryoNET. The course is open to scientists of all age from academia, health care and industry. Level approximately corresponding to PhD student or postdoc depending on experience. Applicants welcome from Sweden, the Nordics, and other countries. receptions_and_networkingworkshops_and_courses registration_of_interest Structural biologybioinformaticsTechnologycomputational methods
  • Advanced Programming with R

    29 - 31 August 2022

    Lausanne, Switzerland

    Elixir node event
    Advanced Programming with R https://tess.elixir-europe.org/events/advanced-programming-with-r Overview This 3-day advanced course is targeted at life scientists or bioinformaticians using the R statistical software who want to extend their knowledge. Lectures will be conducted in the morning, with practicals in the afternoon. 2022-08-29 09:00:00 UTC 2022-08-31 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to RNA-Seq: From quality control to pathway analysis

    1 - 2 September 2022

    Basel, Switzerland

    Elixir node event
    Introduction to RNA-Seq: From quality control to pathway analysis https://tess.elixir-europe.org/events/introduction-to-rna-seq-from-quality-control-to-pathway-analysis-d8c6ae2e-37f6-44fe-826e-a3348db94bd4 Overview This two-day course will present the theory and bioinformatics tools required to analyze RNA-seq gene expression data, The course will present the theory and bioinformatics tools required to analyse RNA-seq gene expression data, from the 2022-09-01 09:00:00 UTC 2022-09-02 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Comparative Genomics

    12 - 14 September 2022

    Streamed or Lausanne, Switzerland

    Elixir node event
    Comparative Genomics https://tess.elixir-europe.org/events/comparative-genomics-d3e772d0-ca37-4239-8d74-2ac20f260036 Overview The aims of this course are to (i) explore key evolutionary concepts, (ii) examine different methodological approaches, and (iii) gain hands-on experience in eukaryotic comparative genomic analyses. 2022-09-12 09:00:00 UTC 2022-09-14 00:00:00 UTC SIB, Streamed or Lausanne, Switzerland SIB Streamed or Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to high-performance computing (sciCORE cluster)

    14 September 2022

    Streamed from Basel, Switzerland

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-73ca4b1c-7185-4a0a-9ea7-17be4fe5f45b This course is susceptible to be streamed to the registered participants, depending on the evolution of the sanitary situation Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and 2022-09-14 09:00:00 UTC 2022-09-14 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Good practice in high-throughput experiments

    21 - 22 September 2022

    Zurich or streamed, Switzerland

    Elixir node event
    Good practice in high-throughput experiments https://tess.elixir-europe.org/events/good-practice-in-high-throughput-experiments-b5752b6c-f7ee-4865-8875-ff2ee12485eb Overview This course offers an overview of good practice in high-throughput experiments (e.g. next-generation sequencing or compound screening). Particularly we focus on pitfalls in the design of projects (e.g. 2022-09-21 09:00:00 UTC 2022-09-22 00:00:00 UTC SIB, Zurich or streamed, Switzerland SIB Zurich or streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps with UNIX for Life Scientists

    26 September 2022

    Zurich, Switzerland

    Elixir node event
    First Steps with UNIX for Life Scientists https://tess.elixir-europe.org/events/first-steps-with-unix-for-life-scientists Overview With a constant evolution of technologies, life scientists (such as laboratory biologists) are faced with an increasing need for bioinformatics skills to deal with high-throughput data storage, retrieval and analysis. 2022-09-26 09:00:00 UTC 2022-09-26 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps with Python in Life Sciences

    28 - 30 September 2022

    Lausanne, Switzerland

    Elixir node event
    First Steps with Python in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-python-in-life-sciences-05751ded-3ccd-4325-a3bf-7fd378452f09 Overview Have you ever been stuck with a file format that doesn't precisely conform to your needs, found yourself doing annoyingly repetitive data manipulations, or struggled to efficiently manage and explore your data? Python to the rescue! 2022-09-28 09:00:00 UTC 2022-09-30 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to Data Management practices (preliminary)

    11 - 14 October 2022

    Elixir node event
    Introduction to Data Management practices (preliminary) https://tess.elixir-europe.org/events/introduction-to-data-management-practices-bb1e2519-bd04-4902-b6c6-ad5c345ff122 #training #url: Introduction to Data Management Practices National course open for PhD students, postdocs, researchers and other employees within all Swedish universities. The course is geared towards life scientists wanting to take the first steps towards a more systematic and reproducible approach to analysing and managing research data. 2022-10-11 09:00:00 UTC 2022-10-14 00:00:00 UTC [] Niclas Jareborg - niclas.jareborg@scilifelab.se [] [] [] [] #trainingtraining
  • Research Data Management and Data Management Plan

    27 - 28 October 2022

    Bern or Lausanne, Switzerland

    Elixir node event
    Research Data Management and Data Management Plan https://tess.elixir-europe.org/events/research-data-management-and-data-management-plan-feebe9bb-fbe8-4a5b-b317-77b82083ff31 Overview Recent studies have shown that worldwide, between 51% and 89% of published life sciences research is not reproducible, with consequent losses estimated at around $100 billions/year in biomedical research (Chalmers et al., 2009; Freedman 2022-10-27 09:00:00 UTC 2022-10-28 00:00:00 UTC SIB, Bern or Lausanne, Switzerland SIB Bern or Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps in Parallelization with OpenMP

    23 November 2022

    Basel or streamed, Switzerland

    Elixir node event
    First Steps in Parallelization with OpenMP https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp-e78a74a8-b0da-4972-94c8-b58a9b5062e6 Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. In order to benefit from this computational power, we need to devise programs explicitly written for parallel machines. 2022-11-23 09:00:00 UTC 2022-11-23 00:00:00 UTC SIB, Basel or streamed, Switzerland SIB Basel or streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to high-performance computing (sciCORE cluster)

    7 December 2022

    Streamed from Basel, Switzerland

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-e05b9960-7646-4eb2-aaca-3e9204da4a82 This course is susceptible to be streamed to the registered participants, depending on the evolution of the sanitary situation Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and 2022-12-07 09:00:00 UTC 2022-12-07 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

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