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  • Galaxy workshop

    12 April 2013

    Norwich, United Kingdom

    Galaxy workshop https://tess.elixir-europe.org/events/galaxy-workshop 2013-04-12 00:00:00 UTC 2013-04-12 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Browsing plant and pathogen genomes with Ensembl Genomes

    7 June 2013

    Norwich, United Kingdom

    Browsing plant and pathogen genomes with Ensembl Genomes https://tess.elixir-europe.org/events/browsing-plant-and-pathogen-genomes-with-ensembl-genomes 2013-06-07 00:00:00 UTC 2013-06-07 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Browsing livestock genomes with Ensembl

    28 June 2013

    Norwich, United Kingdom

    Browsing livestock genomes with Ensembl https://tess.elixir-europe.org/events/browsing-livestock-genomes-with-ensembl 2013-06-28 00:00:00 UTC 2013-06-28 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Hands on Training Workshop: From pathways to networks - from in vivo to in silico and backwards

    8 July 2013

    Norwich, United Kingdom

    Hands on Training Workshop: From pathways to networks - from in vivo to in silico and backwards https://tess.elixir-europe.org/events/hands-on-training-workshop-from-pathways-to-networks-from-in-vivo-to-in-silico-and-backwards 2013-07-08 01:00:00 UTC 2013-07-08 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Systems biology Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Half-day workshop: Basic Principles of R

    16 August 2013

    Norwich, United Kingdom

    Half-day workshop: Basic Principles of R https://tess.elixir-europe.org/events/half-day-workshop-basic-principles-of-r 2013-08-16 01:00:00 UTC 2013-08-16 01:00:00 UTC TGAC The Genome Analysis Centre, Norwich, United Kingdom The Genome Analysis Centre Norwich United Kingdom NR4 7UH Statistics and probability Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Workshop on data science using R

    6 September 2013

    Norwich, United Kingdom

    Workshop on data science using R https://tess.elixir-europe.org/events/workshop-on-data-science-using-r 2013-09-06 01:00:00 UTC 2013-09-06 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Statistics and probability Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • The Ensembl Core API

    20 September 2013

    Norwich, United Kingdom

    The Ensembl Core API https://tess.elixir-europe.org/events/the-ensembl-core-api 2013-09-20 00:00:00 UTC 2013-09-20 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Python for Life Scientists

    8 - 12 October 2013

    Norwich, United Kingdom

    Python for Life Scientists https://tess.elixir-europe.org/events/python-for-life-scientists-580e2a48-bdf1-4e77-bad6-a2a92d648ff1 2013-10-08 00:00:00 UTC 2013-10-12 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Bootcamp for Bioinformaticians

    6 November 2013

    Norwich, United Kingdom

    Bootcamp for Bioinformaticians https://tess.elixir-europe.org/events/bootcamp-for-bioinformaticians 2013-11-06 00:00:00 UTC 2013-11-06 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • NGS Data Analysis Bootcamp for Biologists

    7 November 2013

    Norwich, United Kingdom

    NGS Data Analysis Bootcamp for Biologists https://tess.elixir-europe.org/events/ngs-data-analysis-bootcamp-for-biologists 2013-11-07 00:00:00 UTC 2013-11-07 00:00:00 UTC TGAC The Genome Analysis Centre, Norwich, United Kingdom The Genome Analysis Centre Norwich United Kingdom Bioinformatics [] [] [] workshops_and_courses [] TGACbionformatics
  • Analysing RNA-seq data

    12 - 13 December 2013

    Norwich, United Kingdom

    Analysing RNA-seq data https://tess.elixir-europe.org/events/analysing-rna-seq-data 2013-12-12 00:00:00 UTC 2013-12-13 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom Transcriptomics Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • TGAC Software Carpentry Bootcamp

    3 - 4 February 2014

    Norwich, United Kingdom

    TGAC Software Carpentry Bootcamp https://tess.elixir-europe.org/events/tgac-software-carpentry-bootcamp 2014-02-03 00:00:00 UTC 2014-02-04 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • De novo Assembly

    3 - 6 March 2014

    Norwich, United Kingdom

    De novo Assembly https://tess.elixir-europe.org/events/de-novo-assembly 2014-03-03 00:00:00 UTC 2014-03-06 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • Scientific Meeting 2014 "NGS Data after the Gold Rush" & Management Committee Meeting

    6 - 8 May 2014

    Norwich, United Kingdom

    Scientific Meeting 2014 "NGS Data after the Gold Rush" & Management Committee Meeting https://tess.elixir-europe.org/events/scientific-meeting-2014-ngs-data-after-the-gold-rush-management-committee-meeting 2014-05-06 01:00:00 UTC 2014-05-08 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Bioinformatics [] [] [] meetings_and_conferences [] TGAC
  • SeqAhead: NGS current challenges and data analysis for plant researchers

    19 - 23 May 2014

    Norwich, United Kingdom

    SeqAhead: NGS current challenges and data analysis for plant researchers https://tess.elixir-europe.org/events/seqahead-ngs-current-challenges-and-data-analysis-for-plant-researchers 2014-05-19 01:00:00 UTC 2014-05-23 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • TGAC Summer School: A walk through Bioinformatics

    2 - 6 June 2014

    Norwich, United Kingdom

    TGAC Summer School: A walk through Bioinformatics https://tess.elixir-europe.org/events/tgac-summer-school-a-walk-through-bioinformatics 2014-06-02 01:00:00 UTC 2014-06-06 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • Metagenomics: From bench to data analysis

    8 - 12 September 2014

    Norwich, United Kingdom

    Metagenomics: From bench to data analysis https://tess.elixir-europe.org/events/metagenomics-from-bench-to-data-analysis-c1e58d99-e86f-40ca-9a4a-c86a6b54b57d 2014-09-08 01:00:00 UTC 2014-09-12 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH [] [] [] workshops_and_courses [] TGACbioinformatics
  • TGAC - AllBio: Open Science & Reproducibility Best Practice Workshop

    15 - 17 September 2014

    Norwich, United Kingdom

    TGAC - AllBio: Open Science & Reproducibility Best Practice Workshop https://tess.elixir-europe.org/events/tgac-allbio-open-science-reproducibility-best-practice-workshop 2014-09-15 01:00:00 UTC 2014-09-17 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom Genomics Bioinformatics [] [] [] meetings_and_conferences [] TGAC
  • Training School: genotyping by sequencing

    3 - 7 November 2014

    Norwich, United Kingdom

    Training School: genotyping by sequencing https://tess.elixir-europe.org/events/training-school-genotyping-by-sequencing 2014-11-03 00:00:00 UTC 2014-11-07 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • Metagenomics: From bench to data analysis

    12 - 16 October 2015

    Norwich, United Kingdom

    Metagenomics: From bench to data analysis https://tess.elixir-europe.org/events/metagenomics-from-bench-to-data-analysis 2015-10-12 01:00:00 UTC 2015-10-16 01:00:00 UTC TGAC TGAC, Norwich, United Kingdom TGAC Norwich United Kingdom NR4 7UH Metagenomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • ELIXIR Workshop Genomics

    7 - 8 November 2016

    Bruxelles, Belgium

    Elixir node event
    ELIXIR Workshop Genomics https://tess.elixir-europe.org/events/elixir-workshop-genomics Goal The fast generation of large amounts of data is fundamentally changing the way how research is done today. Many domains of research are challenged with managing, analyzing and sharing genomics data. This is not just a challenge, it is an oppurtunity to implement this workshop for researchers to learn basic handling of genomics concepts, skills and tools. This workshop is aimed at researchers in the life sciences at all career stage and is designed for learners with little to no prior knowledge of Linux and command line tools or biological networks in Cytoscape. A basic knowledge of programming in R is recommended. ​ Workshop Topics The main ambition or this workshop is that researchers get more familiar with genomics data and handle it in a more efficient way. The following topics will be covered during the workshop.   DAY 1 Introduction to Linux and the command line The first session will introduce you to the use of Linux and the command line for managing and analyzing genomics data.   DAY 2​ Data manipulation in R This session gives an introduction to the use of the R packages plyr and ggplot2 for data manipulation and subsequent graphing. Initiation Cytoscape In this tutorial, you will be introduced to the basics of Cytoscape (how to make a network, change the visualisation parameters such as the layout, ...), and to more advanced functionalities such as data integration and data analysis using Cytoscape plugins. 2016-11-07 09:00:00 UTC 2016-11-08 17:00:00 UTC ELIXIR Belgium Belgian Science Policy (BELSPO), 231, Avenue Louise, Bruxelles, Belgium Belgian Science Policy (BELSPO), 231, Avenue Louise Bruxelles Belgium Data visualisation Molecular interactions, pathways and networks Bioinformatics VIB christof.debo@vib.be ELIXIR-BE PhD studentsPost Docs [] [] Cytoscape R-programming Linux
  • COMBINE R for Bioinformatics workshop

    18 - 19 May 2017

    Carlton, Australia

    COMBINE R for Bioinformatics workshop https://tess.elixir-europe.org/events/combine-r-for-bioinformatics-workshop Bioconductor is an Open-Source repository for bioinformatics software in R Statistical Programming Language. Bioconductor provides core technologies and infrastructures that facilitates day-to-day bioinformatics data analysis, including data retrieval, data processing and data analysis. This is a one-day intensive workshop on Bioconductor core packages such as GenomicFeatures, GenomicRanges, GenomicAlignments, Biostrings, Rsamtools, GEOquery, AnnotationHub and other annotation packages. An intermediate knowledge of R is required. Instructors: Anna Quaglieri, Paul Harrison, Maria Doyle, Agnieszka Aleksandra Golicz and Soroor Hediyeh-Zadeh Details: What: COMBINE R for Bioinformatics workshop Date: 19th May 2017 Time: 9am – 5pm Location: Lab14, 700 Swanston St, Carlton VIC 3053 Registration: http://www.abacbs.org/combineworkshops/bioconductor-melb-may-2017 Price: Student $15, Non-student $30 This event is sponsored by Melbourne Bioinformatics. 2017-05-18 23:00:00 UTC 2017-05-19 07:00:00 UTC Soroor Hediyeh-Zadeh combine@combine.org.au LAB-14, 700, Swanston Street, Carlton, Australia LAB-14, 700, Swanston Street Carlton Melbourne City Australia Genomics Bioinformatics [] Melbourne Bioinformatics [] workshops_and_courses first_come_first_served R-programming
  • Genome Annotation with Monica Munoz-Torres

    27 June 2017

    University of Melbourne, Australia

    Genome Annotation with Monica Munoz-Torres https://tess.elixir-europe.org/events/genome-annotation-with-monica-munoz-torres 2017-06-27 09:00:00 UTC 2017-06-27 17:00:00 UTC Melbourne Bioinformatics 161 Barry St, Carlton, University of Melbourne, Australia 161 Barry St, Carlton University of Melbourne Australia Bioinformatics Genomics Data submission, annotation and curation Melbourne Bioinformatics [] [] [] [] BioinformaticsGenomics
  • Introduction to NGS Data Analysis

    27 - 29 June 2017

    Camperdown, Australia

    Introduction to NGS Data Analysis https://tess.elixir-europe.org/events/introduction-to-ngs-data-analysis-8290433d-ac97-4f5c-99ed-8a9bec24a058 Introduction to NGS Data Analysis is a three-day, hands-on workshop that offers attendees a basic understanding of NGS data analysis workflows. The workshop provides hands-on computational experience in analysis of NGS data using common analytical approaches for ChIP-Seq, RNA-Seq data and de novo genome assembly. 2017-06-27 09:00:00 UTC 2017-06-29 17:00:00 UTC Bioplatforms Australia Johns Hopkins Centre, Camperdown, Australia Johns Hopkins Centre Camperdown Australia 2006 Bioinformatics University of Sydney kchamp@bioplatforms.com [] [] workshops_and_courses [] Genomics
  • Genopole Summer School

    4 - 7 July 2017

    Seine-Port, France

    Elixir node event
    Genopole Summer School https://tess.elixir-europe.org/events/bioinformatic-and-biostatistic-tools-in-medical-genomics Bioinformatic and Biostatistic tools in medical genomics 2017-07-04 09:00:00 UTC 2017-07-07 00:00:00 UTC Genopole, IFB and France Genomique Châteauform' Seine Port (77), Seine-Port, France Châteauform' Seine Port (77) Seine-Port Seine-et-Marne France 77240 Medicines research and development Metagenomics Functional genomics [] goo.gl/bzEdQ2 [] BioinformaticiansResearcher in life sciences workshops_and_courses first_come_first_served Statistical-model Variant-callingSNPbioinformaticsBiomarker discoverymetagenomicsNext generation sequencing data analysisWorkflowscomputer-science
  • Introduction to R

    12 - 13 July 2017

    Clayton, Australia

    Introduction to R https://tess.elixir-europe.org/events/introduction-to-r-ab6dceb1-f7e0-4583-9b7e-4344a50535f3 This workshop will teach the fundamentals of R. You will learn to quickly visualize and summarize data from experiments involving multiple experimental factors and measurements. Register here: https://www.eventbrite.com/e/introduction-to-r-tickets-34994825465 2017-07-12 23:00:00 UTC 2017-07-13 06:00:00 UTC Monash Bioinformatics Platform Room E365 (Level 3, East wing, 20 Chancellors Walk- Menzies Building), Monash University Clayton Campus, Wellington Road, Clayton, Australia Room E365 (Level 3, East wing, 20 Chancellors Walk- Menzies Building), Monash University Clayton Campus, Wellington Road Clayton Australia Bioinformatics Monash University [] [] workshops_and_courses [] bioinformatics R-programming
  • GATK Best Practices for Variant Discovery

    17 - 19 July 2017

    Edinburgh, United Kingdom

    Elixir node event
    GATK Best Practices for Variant Discovery https://tess.elixir-europe.org/events/gatk-best-practices-for-variant-discovery This workshop will focus on the core steps involved in calling variants with the Broad’s Genome Analysis Toolkit, using the Best Practices developed by the GATK team. You will learn why each step is essential to the variant discovery process, what are the operations performed on the data at each step, and how to use the GATK tools to get the most accurate and reliable results out of your dataset. In the course of this workshop, we highlight key functionalities such as the GVCF workflow for joint variant discovery in cohorts, RNAseq-specific processing, and somatic variant discovery using MuTect2. We also preview capabilities of the upcoming GATK version 4, including a new workflow for CNV discovery, and we demonstrate the use of pipelining tools to assemble and execute GATK workflows. 2017-07-17 09:00:00 UTC 2017-07-19 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom Bioinformatics Genomics Edinburgh Genomics Bert Overduin - bert.overduin@ed.ac.uk [] [] workshops_and_courses [] Variant discoveryGenomicsBioinformatics
  • Long-read Data Analysis workshop

    18 - 19 July 2017

    Kensington, Australia

    Long-read Data Analysis workshop https://tess.elixir-europe.org/events/long-read-data-analysis-workshop Workshop Content: Introduction to long-read sequencing Practical considerations when performing long-read sequencing and analysis Introduction to the command line interface and NGS file formats Short and long-read de novo genome assembly (microbial) Comparison between short and long-read assemblies This workshop will be delivered using a mixture of lectures, hands-on practical sessions, and open discussions. 2017-07-18 09:00:00 UTC 2017-07-19 17:00:00 UTC Bioplatforms Australia Red Centre Building, Kensington, Australia Red Centre Building Kensington Australia 2033 Bioinformatics University of New South Wales [] [] workshops_and_courses [] Genomics
  • An Introduction to Genomics with R

    18 July 2017

    Adelaide, Australia

    An Introduction to Genomics with R https://tess.elixir-europe.org/events/an-introduction-to-genomics-with-r 2017-07-18 09:00:00 UTC 2017-07-18 17:00:00 UTC University of Adelaide Room 422, Horace Lamb Building, The University of Adelaide, Adelaide, Australia Room 422, Horace Lamb Building, The University of Adelaide Adelaide SA Australia Bioinformatics University of Adelaide [] [] workshops_and_courses [] R-programminggenomics
  • Introduction to R

    24 July 2017

    Clayton, Australia

    Introduction to R https://tess.elixir-europe.org/events/introduction-to-r-fa4063f1-c129-4635-8b07-6e906e39750c 2017-07-24 10:00:00 UTC 2017-07-24 17:00:00 UTC Monash Bioinformatics Training Room 2 (T2), Matheson Library, Monash University, Clayton, Australia Training Room 2 (T2), Matheson Library, Monash University Clayton Australia Bioinformatics Monash University [] [] workshops_and_courses [] R-programming
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