Events
Event types: Workshops and courses
and Include expired: true
and Keywords: Cross domain (cross-domain) or Galaxy or Immunity or Linux or Medicine or Workflows
and Scientific topics: High-throughput sequencing or Workflows
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OnlineWorkshops and coursesWORKSHOP: RNA-Seq: reads to differential genes and pathways
27 September 2022 @ 14:00 - 17:00
Online
Bioinformatics Functional genomics Gene expression Workflows RNA-Seq Analysis Functional clustering Pathway analysis RNA-seq Gene Expression Nextflow nf-core Functional analysis -
OnlineWorkshops and coursesModular and reproducible workflows for federated molecular QTL analysis
10 November 2022
Online
DNA & RNA (dna-rna) Proteins (proteins) UniProt: The Universal Protein Resource Fermentation Microbial ecosystems webinar Antimicrobial resistance Ensembl BLAST Open Targets Platform Cross domain (cross-domain) Chemical biology (chemical-biology) Drug discovery Drug target identification UniRule ARBA Automated annotation MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Programmatic access API Python Complex Portal macromolecular assembly InterPro Boolean modelling Europe PubMed Central Literature (literature) Open access Protein Data Bank in Europe - Knowledge Base 3D structure AlphaFold Database DeepMind Artificial intelligence AI Structure prediction cancer Boolean Ensembl Genomes European Nucleotide Archive Data archive Raw sequencing data RNAcentral Non-coding RNA ncRNA GPU Data protection Job dispatcher Bioimage analysis resource Accessibility Missense variation Biostatistics Rfam non-coding RNA Infernal software Sequence annotation Root microbiome Abiotic stress land management Plant genotype Plant webinar series HPC database development cross-linked databases Plant database data infrastructure Plant breeding Data standards data managemnet data sharing Hyb-Seq method Flowering plants Crop improvement Pangenomics Pangenomes Virtual humans Drug-target identification plant-microbe interactions Spatial transcriptomics Plant research Drug targets Machine learning Mathematical modelling plant science Data integration plant-environment interaction Phenotyping field phenotyping Deep phenotyping EOSC-Life NHGRI-EBI GWAS Catalog clinical data genome-wide association plants European Variation Archive EVA Variant clusters Variant data annotation Constraint-based metabolic modelling UniProt knowledgebase protein variant impact disease-associated protein variants Bioethics FAIR principles ELSI cohort data translational research BioModels database Mathematical modeling Reproducibity Systems biology models workflows federated analysis polygenic risk scores IntAct Molecular Interaction Database PSICQUIC IMEx Complex portal Agent-based modelling Macrophages Tumorigenesis Training (Training) On-demand teaching introduction Building blocks Data analysis COSMIC Cancer mutation Somatic mutation ChEMBL: Bioactive data for drug discovery Chemical compounds drug-like molecules Chemogenomics Biocurator Programming Data management Green Algorithms Open data Environmental impact Carbon footprint HPC workflows Orchestrator Gene expression (gene-expression) -
OnlineWorkshops and coursesIntroducing PerMedCoE Building Blocks and Workflows to streamline biological analysis pipelines
15 December 2022
Online
Computational biology Personalised medicine Workflows Protein Data Bank in Europe Ensembl UniProt: The Universal Protein Resource AlphaFold Database Proteins (proteins) DNA & RNA (dna-rna) Variant prediction Fermentation Microbial ecosystems webinar Antimicrobial resistance BLAST Open Targets Platform Cross domain (cross-domain) Chemical biology (chemical-biology) Drug discovery Drug target identification UniRule ARBA Automated annotation MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Programmatic access API Python Complex Portal macromolecular assembly InterPro Boolean modelling Europe PubMed Central Literature (literature) Open access Protein Data Bank in Europe - Knowledge Base 3D structure DeepMind Artificial intelligence AI Structure prediction cancer Boolean Ensembl Genomes European Nucleotide Archive Data archive Raw sequencing data RNAcentral Non-coding RNA ncRNA GPU Data protection Job dispatcher Bioimage analysis resource Accessibility Missense variation Biostatistics Rfam non-coding RNA Infernal software Sequence annotation Root microbiome Abiotic stress land management Plant genotype Plant webinar series HPC database development cross-linked databases Plant database data infrastructure Plant breeding Data standards data managemnet data sharing Hyb-Seq method Flowering plants Crop improvement Pangenomics Pangenomes Virtual humans Drug-target identification plant-microbe interactions Spatial transcriptomics Plant research Drug targets Machine learning Mathematical modelling plant science Data integration plant-environment interaction Phenotyping field phenotyping Deep phenotyping EOSC-Life NHGRI-EBI GWAS Catalog clinical data genome-wide association plants European Variation Archive EVA Variant clusters Variant data annotation Constraint-based metabolic modelling UniProt knowledgebase protein variant impact disease-associated protein variants Bioethics FAIR principles ELSI cohort data translational research BioModels database Mathematical modeling Reproducibity Systems biology models workflows federated analysis polygenic risk scores IntAct Molecular Interaction Database PSICQUIC IMEx Complex portal Agent-based modelling Macrophages Tumorigenesis Training (Training) On-demand teaching introduction Building blocks Data analysis -
OnlineWorkshops and coursesSingle-cell RNA-seq analysis using Galaxy
6 - 10 February 2023
Online
RNA-Seq analysis Expression data Workflows RNA-Seq Expression Atlas Gene expression (gene-expression) Single cell Galaxy Droplet-based single-cell RNA library preparation -
OnlineWorkshops and coursesWORKSHOP: Make your bioinformatics workflows findable and citable
21 March 2023 @ 15:00 - 17:00
Online
Workflows Open science WorkflowHub Research software -
OnlineWorkshops and coursesData protection and privacy preservation in software development
10 May 2023
Online
Computational biology Personalised medicine Workflows Protein Data Bank in Europe Ensembl UniProt: The Universal Protein Resource AlphaFold Database Proteins (proteins) DNA & RNA (dna-rna) Variant prediction Fermentation Microbial ecosystems webinar Antimicrobial resistance BLAST Open Targets Platform Cross domain (cross-domain) Chemical biology (chemical-biology) Drug discovery Drug target identification UniRule ARBA Automated annotation MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Programmatic access API Python Complex Portal macromolecular assembly InterPro Boolean modelling Europe PubMed Central Literature (literature) Open access Protein Data Bank in Europe - Knowledge Base 3D structure DeepMind Artificial intelligence AI Structure prediction cancer Boolean Ensembl Genomes European Nucleotide Archive Data archive Raw sequencing data RNAcentral Non-coding RNA ncRNA GPU Data protection Job dispatcher Bioimage analysis resource Accessibility Missense variation Biostatistics Rfam non-coding RNA Infernal software Sequence annotation Root microbiome Abiotic stress land management Plant genotype Plant webinar series HPC -
OnlineWorkshops and coursesWORKSHOP: Unlocking nf-core - customising workflows for your research
18 - 19 May 2023
Online
Workflows Bioinformatics Computational biology Nextflow nf-core Pipelines -
OnlineWorkshops and coursesWEBINAR: Pro tips for scaling bioinformatics workflows to HPC
31 May 2023 @ 13:00 - 14:00
Online
Bioinformatics Workflows HPC Scalable Computing -
OnlineWorkshops and coursesWORKSHOP: Translating workflows into Nextflow with Janis
19 June 2023 @ 13:00 - 16:30
Online
Workflows Bioinformatics Nextflow Galaxy CWL
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