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OnlineWorkshops and coursesProgrammatic access to UniProt using Python
29 September 2022
Online
Proteins UniProt: The Universal Protein Resource Proteins (proteins) MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest Cross domain (cross-domain) ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Programmatic access API Python Complex Portal macromolecular assembly InterPro Boolean modelling Europe PubMed Central Literature (literature) Open access Protein Data Bank in Europe - Knowledge Base 3D structure AlphaFold Database DeepMind Artificial intelligence AI Structure prediction cancer Boolean Ensembl Genomes DNA & RNA (dna-rna) European Nucleotide Archive Data archive Raw sequencing data RNAcentral Non-coding RNA ncRNA GPU Data protection Job dispatcher Bioimage analysis resource Accessibility Missense variation Biostatistics Rfam non-coding RNA Infernal software Sequence annotation Root microbiome Abiotic stress land management Plant genotype Plant webinar series HPC database development cross-linked databases Plant database data infrastructure Plant breeding Data standards data managemnet data sharing Hyb-Seq method Flowering plants Crop improvement Pangenomics Pangenomes Virtual humans Drug-target identification plant-microbe interactions Spatial transcriptomics Plant research Open Targets Platform Drug targets Machine learning Mathematical modelling plant science Data integration plant-environment interaction Phenotyping field phenotyping Deep phenotyping EOSC-Life NHGRI-EBI GWAS Catalog clinical data genome-wide association Proteomics Proteomes Peptide search plants European Variation Archive EVA Variant clusters Variant data annotation Constraint-based metabolic modelling UniProt knowledgebase protein variant impact disease-associated protein variants Bioethics FAIR principles ELSI cohort data translational research BioModels database Mathematical modeling Reproducibity Systems biology models workflows federated analysis polygenic risk scores IntAct Molecular Interaction Database PSICQUIC IMEx Complex portal Agent-based modelling Macrophages Tumorigenesis Ensembl Training (Training) On-demand teaching introduction Building blocks Data analysis COSMIC Cancer mutation Somatic mutation UniRule UniFIRE ARBA Protein annotation ChEMBL: Bioactive data for drug discovery Chemical compounds drug-like molecules Chemogenomics Biocurator Programming Data management Green Algorithms Open data Environmental impact Carbon footprint HPC workflows Orchestrator Gene expression (gene-expression) Chemosensitivity assay Experimental protocols Drug screening MICHA European Genome-phenome Archive EGA restricted access UniProt Introduction UniProtKB Proteome Protein Data Bank in Europe genes Introductory GDPR Data security Expression Atlas UniParc UniRef -
OnlineWorkshops and coursesIntroductory bioinformatics Q&A session: genes and gene expression
5 October 2022
Online
Bioinformatics Protein Data Bank in Europe Ensembl Genomes UniProt: The Universal Protein Resource AlphaFold Database Proteins (proteins) DNA & RNA (dna-rna) Variant prediction Fermentation Microbial ecosystems webinar Ensembl Antimicrobial resistance BLAST Open Targets Platform Cross domain (cross-domain) Chemical biology (chemical-biology) Drug discovery Drug target identification UniRule ARBA Automated annotation MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Programmatic access API Python Complex Portal macromolecular assembly InterPro Boolean modelling Europe PubMed Central Literature (literature) Open access Protein Data Bank in Europe - Knowledge Base 3D structure DeepMind Artificial intelligence AI Structure prediction cancer Boolean European Nucleotide Archive Data archive Raw sequencing data RNAcentral Non-coding RNA ncRNA GPU Data protection Job dispatcher Bioimage analysis resource Accessibility Missense variation Biostatistics Rfam non-coding RNA Infernal software Sequence annotation Root microbiome Abiotic stress land management Plant genotype Plant webinar series HPC database development cross-linked databases Plant database data infrastructure Plant breeding Data standards data managemnet data sharing Hyb-Seq method Flowering plants Crop improvement Pangenomics Pangenomes Virtual humans Drug-target identification plant-microbe interactions Spatial transcriptomics Plant research Drug targets Machine learning Mathematical modelling plant science Data integration plant-environment interaction Phenotyping field phenotyping Deep phenotyping EOSC-Life NHGRI-EBI GWAS Catalog clinical data genome-wide association plants European Variation Archive EVA Variant clusters Variant data annotation Constraint-based metabolic modelling UniProt knowledgebase protein variant impact disease-associated protein variants Bioethics FAIR principles ELSI cohort data translational research BioModels database Mathematical modeling Reproducibity Systems biology models workflows federated analysis polygenic risk scores IntAct Molecular Interaction Database PSICQUIC IMEx Complex portal Agent-based modelling Macrophages Tumorigenesis Training (Training) On-demand teaching introduction Building blocks Data analysis COSMIC Cancer mutation Somatic mutation ChEMBL: Bioactive data for drug discovery Chemical compounds drug-like molecules Chemogenomics Biocurator Programming Data management Green Algorithms Open data Environmental impact Carbon footprint HPC workflows Orchestrator Gene expression (gene-expression) Chemosensitivity assay Experimental protocols Drug screening MICHA European Genome-phenome Archive EGA restricted access UniProt Introduction UniProtKB Proteome genes Introductory GDPR Data security Expression Atlas -
OnlineWorkshops and coursesData protection and security aspects of running simulations on personal data with HPC
11 October 2022
Online
Data security Personalised medicine Computer science Protein Data Bank in Europe Ensembl Genomes UniProt: The Universal Protein Resource AlphaFold Database Proteins (proteins) DNA & RNA (dna-rna) Variant prediction Fermentation Microbial ecosystems webinar Ensembl Antimicrobial resistance BLAST Open Targets Platform Cross domain (cross-domain) Chemical biology (chemical-biology) Drug discovery Drug target identification UniRule ARBA Automated annotation MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Programmatic access API Python Complex Portal macromolecular assembly InterPro Boolean modelling Europe PubMed Central Literature (literature) Open access Protein Data Bank in Europe - Knowledge Base 3D structure DeepMind Artificial intelligence AI Structure prediction cancer Boolean European Nucleotide Archive Data archive Raw sequencing data RNAcentral Non-coding RNA ncRNA GPU Data protection Job dispatcher Bioimage analysis resource Accessibility Missense variation Biostatistics Rfam non-coding RNA Infernal software Sequence annotation Root microbiome Abiotic stress land management Plant genotype Plant webinar series HPC database development cross-linked databases Plant database data infrastructure Plant breeding Data standards data managemnet data sharing Hyb-Seq method Flowering plants Crop improvement Pangenomics Pangenomes Virtual humans Drug-target identification plant-microbe interactions Spatial transcriptomics Plant research Drug targets Machine learning Mathematical modelling plant science Data integration plant-environment interaction Phenotyping field phenotyping Deep phenotyping EOSC-Life NHGRI-EBI GWAS Catalog clinical data genome-wide association plants European Variation Archive EVA Variant clusters Variant data annotation Constraint-based metabolic modelling UniProt knowledgebase protein variant impact disease-associated protein variants Bioethics FAIR principles ELSI cohort data translational research BioModels database Mathematical modeling Reproducibity Systems biology models workflows federated analysis polygenic risk scores IntAct Molecular Interaction Database PSICQUIC IMEx Complex portal Agent-based modelling Macrophages Tumorigenesis Training (Training) On-demand teaching introduction Building blocks Data analysis COSMIC Cancer mutation Somatic mutation ChEMBL: Bioactive data for drug discovery Chemical compounds drug-like molecules Chemogenomics Biocurator Programming Data management Green Algorithms Open data Environmental impact Carbon footprint HPC workflows Orchestrator Gene expression (gene-expression) Chemosensitivity assay Experimental protocols Drug screening MICHA European Genome-phenome Archive EGA restricted access UniProt Introduction UniProtKB Proteome genes Introductory GDPR -
OnlineWorkshops and coursesMicroscopy data analysis: machine learning and the BioImage Archive
22 - 26 May 2023
Online
Machine learning Bioimaging Light microscopy Image analysis Electron microscopy Electron Microscopy Public Image Archive - EMPIAR BioImage Archive BioStudies Database Bioimage analysis Machine learning models Scientific computing -
OnlineWorkshops and coursesIntroduction to Long-read Bioinformatics
26 - 29 June 2023
Online
Bioinformatics Genomics HDRUK -
OnlineWorkshops and coursesWEBINAR: Getting started with RNAseq: Transforming raw reads into biological insights
6 September 2023 @ 13:00 - 14:00
Online
RNA-Seq Transcriptomics RNAseq RNA sequencing -
OnlineWorkshops and coursesWORKSHOP: RNASeq: reads to differential genes and pathways
11 - 12 October 2023
Online
RNA-Seq Transcriptomics RNASeq -
OnlineWorkshops and coursesIntroduction to RNA-seq and functional interpretation
12 - 16 February 2024
Online
RNA-Seq analysis Function analysis Gene expression profile RNA-Seq Transcriptome assembly Transcriptomics Network analysis Gene transcripts -
OnlineWorkshops and coursesMicroscopy data analysis: machine learning and the BioImage Archive
22 - 26 April 2024
Online
Machine learning Bioimaging Image analysis Bioimage analysis Machine learning models Scientific computing Light microscopy Electron microscopy -
OnlineWorkshops and coursesMicroscopy data analysis: machine learning and the BioImage Archive
31 March - 4 April 2025
Online
Machine learning Bioimaging Image analysis Bioimage analysis Machine learning models Scientific computing Light microscopy Electron microscopy
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