Events
Event types: Workshops and courses
and Include expired: true
and Keywords: Abiotic stress or Immunity or Linux or Reproducible Science or Workflows or lifescience
and Scientific topics: Gene expression QTL analysis or Workflows
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OnlineWorkshops and coursesCWLEXEC: Run Common Workflow Language on HPC with IBM Spectrum LSF
28 February 2018 @ 14:00 - 15:00
Online
Workflows Genomics Bioinformatics CWL HPC LSF -
OnlineWorkshops and coursesH3ABioNet 2018 Genotyping Chip Data Analysis and GWAS lecture series - Lecture 1
20 August 2018 @ 15:00 - 16:30
Online
Bioinformatics GWAS study Workflows Computational biology Genotyping experiment Population genomics Nextflow Docker H3ABioNet GWAS Genotyping array analysis bioinformatics Africa Population Genomics Reproducible Science H3Africa genotyping array High performance computing Cloud computing GWAS workflow H3ABioNet GWAS 2018 Lecture Series -
Face-to-faceWorkshops and coursesWorkshop on Research Objects (RO2018)
29 October 2018 @ 09:00 - 17:00
Amsterdam, Netherlands
Face-to-face
Computer science Data management Data architecture, analysis and design Data integration and warehousing Data identity and mapping Data submission, annotation, and curation Informatics Ontology and terminology Software engineering Workflows digital archives data repository linked data -
OnlineWorkshops and courseseQTL Catalogue: a compendium of uniformly processed human expression and splicing QTLs
12 February 2020
Online
GWAS study Genetic variation Gene expression QTL analysis Scientific communication Scientific presentation Data presentation Research presentation Protein Data Bank in Europe Ensembl UniProt: The Universal Protein Resource AlphaFold Database Proteins (proteins) DNA & RNA (dna-rna) Variant prediction Fermentation Microbial ecosystems webinar Antimicrobial resistance BLAST Open Targets Platform Cross domain (cross-domain) Chemical biology (chemical-biology) Drug discovery Drug target identification UniRule ARBA Automated annotation MetaboLights: Metabolomics repository and reference database Chemical Entities of Biological Interest ChEBI Metabolites Molecular building blocks of life Human Cell Atlas Data Coordination Platform Single-cell transcriptomics HCA data portal Programmatic access API Python Complex Portal macromolecular assembly InterPro Boolean modelling Europe PubMed Central Literature (literature) Open access Protein Data Bank in Europe - Knowledge Base 3D structure DeepMind Artificial intelligence AI Structure prediction cancer Boolean Ensembl Genomes European Nucleotide Archive Data archive Raw sequencing data RNAcentral Non-coding RNA ncRNA GPU Data protection Job dispatcher Bioimage analysis resource Accessibility Missense variation Biostatistics Rfam non-coding RNA Infernal software Sequence annotation Root microbiome Abiotic stress land management Plant genotype Plant webinar series HPC database development cross-linked databases Plant database data infrastructure Plant breeding Data standards data managemnet data sharing Hyb-Seq method Flowering plants Crop improvement Pangenomics Pangenomes Virtual humans Drug-target identification plant-microbe interactions Spatial transcriptomics Plant research Drug targets Machine learning Mathematical modelling plant science Data integration plant-environment interaction Phenotyping field phenotyping Deep phenotyping EOSC-Life NHGRI-EBI GWAS Catalog clinical data genome-wide association plants European Variation Archive EVA Variant clusters Variant data annotation Constraint-based metabolic modelling UniProt knowledgebase protein variant impact disease-associated protein variants Bioethics FAIR principles ELSI cohort data translational research BioModels database Mathematical modeling Reproducibity Systems biology models workflows federated analysis polygenic risk scores IntAct Molecular Interaction Database PSICQUIC IMEx Complex portal Agent-based modelling Macrophages Tumorigenesis Training (Training) On-demand teaching introduction Building blocks Data analysis COSMIC Cancer mutation Somatic mutation ChEMBL: Bioactive data for drug discovery Chemical compounds drug-like molecules Chemogenomics Biocurator Programming Data management Green Algorithms Open data Environmental impact Carbon footprint HPC workflows Orchestrator Gene expression (gene-expression) Chemosensitivity assay Experimental protocols Drug screening MICHA European Genome-phenome Archive EGA restricted access UniProt Introduction UniProtKB Proteome genes Introductory GDPR Data security Expression Atlas Pfam protein sequence search Domain architecture Protein taxonomy AI structure prediction COVID-19 Coronavirus COVID-19 Data Portal Virology Computational simulations Signalling prior knowledge Cancer therapy response PRIDE: The Proteomics Identifications Database protein structure prediction AI system Competency framework Publication Journal club Preprints Aggregated view Structural similarity PPI networks Cell signaling Malaria Biological networks Graph theory Building biological networks Biocuration Information Manager Industry Rare-variant Variant association SKAT Sensitive data Human cohort data FAIR Gene Ontology International Mouse Phenotyping Consortium Portal Biocurators biocuration programming skills training career development Cell-level simulations Personalised medicine PerMedCoE Single cell Phenotype Genome-Wide Association Studies Genome Signaling networks BioImage Archive REST Funding UniChem: Chemical Structure Cross-referencing Bioactivity data Drug-like compounds BioStudies Database EBI Search Finding data World Sight Day Eye development Eye disease Open software Metadata Web Services Dbfetch Database fetch programmatic access Open Targets Protein structure prediction Colab notebooks RESTful API RESTful Web Services PDBe Ligand binding sites Protein families Protein functional analysis Protein sequences Data curation Biomolecular sequences Cytoscape PsyArXiv Psychology Bioactive data Drug-like molecules Biological studies Literature Neurodegenerative disorders Data sharing Molecular visualisation Molecular structures Electron density maps EBI BioSamples Database BioSamples Data Use Ontology DUO ELIXIR Ensembl Variant Effect Predictor Variant Effect Predictor VEP Variation data Annotation SciLite annotation Text mining MGnify Microbiome Environment Proteomes Variant data Publications Citations UniProt Disease Portal ENA Sequence Search Reactome pathways database ReactomeGSA Pathway analysis Single cell RNA-seq Multiomics Data visualisation GitHub Graph database protein Gene function Mouse models IMPC Mammalian Phenotype Ontology Mouse knockouts Xenograft models Cancer EurOPDX InterProScan PDBe-KB Interpro API Europe PMC PubMed Protein function Preprints SARS-CoV-2 Genome browser Vertebrate genomes Comparative genomics Drug-like properties eQTL Catalogue -
Face-to-faceWorkshops and coursesWEBINAR: Launch, monitor and manage data pipelines on any infrastructure with Nextflow Tower
5 August 2021 @ 10:00 - 11:00
Australia
Face-to-face
Data management Workflows Distributed data analysis -
Face-to-faceWorkshops and coursesWEBINAR: Where to go when your bioinformatics outgrows your compute
19 August 2021 @ 12:00 - 13:00
Australia
Face-to-face
Bioinformatics Workflows HPC High performance computing Compute NCMAS -
OnlineWorkshops and coursesBioinformatics workflow management
29 November - 1 December 2021
Online
Workflows Bioinformatics bioinformatics FAIR Snakemake CWL Nextflow nf-core workflUX WESkit WES -
OnlineWorkshops and coursesTidy Trannscriptomics for Single-cel RNA Sequencing Analyses
18 February 2022 @ 13:00 - 15:00
Online
Workflows scRNA-seq Visualization R/Bioconductor -
OnlineWorkshops and coursesWEBINAR: Portable, reproducible and scalable bioinformatics workflows using Nextflow and Pawsey Nimbus Cloud
20 September 2022 @ 12:00 - 13:00
Online
Bioinformatics Workflows Nextflow nf-core Reproducibility -
OnlineWorkshops and coursesWORKSHOP: RNA-Seq: reads to differential genes and pathways
27 September 2022 @ 14:00 - 17:00
Online
Bioinformatics Functional genomics Gene expression Workflows RNA-Seq Analysis Functional clustering Pathway analysis RNA-seq Gene Expression Nextflow nf-core Functional analysis
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