Executive Masters in Management of Research Infrastructures
13 November 2018 - 26 June 2020
Milan, ItalyExecutive Masters in Management of Research Infrastructures http://www.ebi.ac.uk/training/events/2018/executive-masters-management-research-infrastructures https://tess.elixir-europe.org/events/executive-masters-in-management-of-research-infrastructures-12abb26e-f3b7-45ac-92c6-24008017292d This Masters development programme is aimed at current Research Infrastructures managers and leaders who wish to develop the competencies required to meet the needs of Research Infrastructures in the planning, construction and operation phases. 2018-11-13 12:00:00 UTC 2020-06-26 12:00:00 UTC University of Milano-Bicocca, Milan, Italy University of Milano-Bicocca Milan Italy 20126  Claire Johnson     HDRUK
3rd Tool-Training for Proteomics
28 October 2019
Bochum, Germany3rd Tool-Training for Proteomics https://www.denbi.de/training/553-3rd-tool-training-for-proteomics https://tess.elixir-europe.org/events/3rd-tool-training-for-proteomics Educators: Michael Kohl, Treesa Sunny, Michael Turewicz and Julian Uszkoreit (BioInfra.Prot) Date: Monday, 2019-10-28 Location: Ruhr University Bochum, 44801 Bochum Contents: In this one day course we will show some of BioInfra.Prot's tools provided by de.NBI, namely “PIA - Protein Inference Algorithms”, “BIONDA – A Free Biomarker Database” and “CalibraCurve”. Besides the tool based sessions we offer a "Proteomics in the Cloud" session where we show advantages of cloud based bioinformatics and give a tutorial how to access the de.NBI cloud. PIA allows to inspect and combine the results of proteomics search engines. The main focus lays on the integrated inference algorithms for identification and quantification purposes. BIONDA is a free, up-to-date and user-friendly biomarker and biomarker candidate database that facilitates any kind of research on protein biomarkers and the corresponding diseases. CalibraCurve is a tool intended for the generation of calibration curves in the context of MRM (targeted proteomics) experiments. Such calibration curves are necessary for the selection of suitable transitions. Learning goals: Attendees of the course will learn how to use the tools PIA, BIONDA and CalibraCurve effectively for their daily proteomics tasks. Additionally they will learn how to use the de.NBI cloud. Prerequisites: This course is for all researches in the field of proteomics. The attendees should have basic knowledge of LC-MS proteomics, but no prior bioinformatics skills are required. Basic knowledge of how to analyse LC-MS data are sufficient. Attendees are required to bring their own laptops. If this is not possible or laptops have very low computing capacities, please contact the organizers. Keywords: Proteomics; Data Analysis; Biomarkers; de.NBI Cloud Tools: PIA; BIONDA; CalibraCurve 2019-10-28 09:00:00 UTC 2019-10-28 17:00:00 UTC de.NBI Bochum, Bochum, Germany Bochum Bochum Arnsberg Germany    workshops_and_courses  
4th Differential analysis of quantitative proteomics data using R
18 November 2019
Bochum, Germany4th Differential analysis of quantitative proteomics data using R https://www.denbi.de/training/554-4th-differential-analysis-of-quantitative-proteomics-data-using-r https://tess.elixir-europe.org/events/4th-differential-analysis-of-quantitative-proteomics-data-using-r Educators: Michael Turewicz (bioinformatician) and Karin Schork (biostatistician) (BioInfra.Prot) Date: Monday, 18th Nov 2019 Location: Ruhr University Bochum, 44801 Bochum Contents: This course will impart knowledge about how to conduct a differential analysis of high-throughput quantitative proteomics data using R. As we start with a basic introduction to the popular statistical programming language, no prior knowledge on R is required. The statistical background on utilized methods is explained in order to enable the participants to assess their own as well as published workflows critically. In this regard the course will touch upon • statistical inference: hypotheses, type I and II error • location tests (t-test and ANOVA) • multiple testing Learning goals: • Independent usage of basic R functions including • data import and export • basic plots • statistical tests • Deeper understanding of statistical methods applied in differential analyses Prerequisites: • Basic understanding of high-dimensional data sets from quantitative proteomics or other life sciences; • No prior knowledge on R required • Please bring your own laptop for the hands-on exercises! Keywords: R; high-throughput data; omics; proteomics; differential analysis Tools: download and more information on R here: https://cran.r-project.org/ We recommend using an editor such as RStudio, see www.rstudio.com 2019-11-18 09:00:00 UTC 2019-11-18 17:00:00 UTC de.NBI Bochum, Bochum, Germany Bochum Bochum Arnsberg Germany      
Advanced analysis of quantitative proteomics data using R
19 November 2019
Bochum, GermanyAdvanced analysis of quantitative proteomics data using R https://www.denbi.de/training/556-advanced-r-course https://tess.elixir-europe.org/events/advanced-analysis-of-quantitative-proteomics-data-using-r Educators: Michael Turewicz (bioinformatician) and Karin Schork (biostatistician) (BioInfra.Prot) Date: Tuesday, 19th Nov 2019 Location: Ruhr University Bochum, 44801 Bochum Contents: In this course you will learn about using R for the analysis of proteomics data. We will focus on data preprocessing methods and advanced methods for data analysis. In this regard the cpurse will touch upon: • data normalization • quality control, handling of missing values • clustering, heatmaps • ROC-curves Please be aware that basic knowledge of R and methods for differential analysis of proteomics data are taught in our course “Differential analysis of quantitative proteomics data” the previous day (Monday, 18th Nov 2019, http://goo.gl/forms/mpKHnbT1Um) Learning goals: • Independent usage of R functions for • Data preprocessing • Plots and graphs • Statistical methods for data analysis • Use of additional R packages • Deeper understanding of statistical methods applied in differential analyses Prerequisites: • Basic understanding of high-dimensional data sets from quantitative proteomics or other life sciences; • Basic knowledge of R (e.g. data import, basic plots, t-test, for loop) and basic knowledge of differential analysis of proteomics data. Both can for example be gained from our course “Differential analysis of quantitative proteomics data” the previous day (Monday, 18th Nov 2019, http://goo.gl/forms/mpKHnbT1Um). • Please bring your own laptop for the hands-on exercises! Keywords: R; high-throughput data; omics; proteomics; data analysis, graphics, data preprocessing Tools: download and more information on R here: https://cran.r-project.org/ We recommend using an editor such as RStudio, see www.rstudio.com 2019-11-19 09:00:00 UTC 2019-11-19 17:00:00 UTC de.NBI Bochum, Bochum, Germany Bochum Bochum Arnsberg Germany    workshops_and_courses  
ELIXIR Innovation and SME Forum: Data management in the life sciences - a driver for innovation
27 - 28 November 2019
Milan, ItalyELIXIR Innovation and SME Forum: Data management in the life sciences - a driver for innovation https://www.elixir-europe.org/events/sme-2019-milan https://tess.elixir-europe.org/events/elixir-innovation-and-sme-forum-data-management-in-the-life-sciences-a-driver-for-innovation The Innovation and SME Forum on Data management in the life sciences - a driver for innovation will take place on 27-28 November in Milan, Italy. This event aims to inform participants about ELIXIR resources and create a space for networking between industry and academia. What can attendees expect? Attendees at this event will be immersed in a world of data-driven innovation, with a mix of high-level keynote presentations and hands-on sessions to discuss and interact with other companies, academics and ELIXIR partners. A dedicated session with Flash Talks, will give SMEs and Start-Ups the chance to introduce their work to a broad audience (see registration form). Who should attend? This event is open to anyone interested in the data driven life sciences sector, for example: Researchers in academia and industry Large and small companies that develop services for data management and analysis Policy makers and funders Organisers This event is a collaborative effort, organised by ELIXIR Italy, Assobiotec, and Area science park. 2019-11-27 12:00:00 UTC 2019-11-28 16:00:00 UTC Grand Hotel Villa Torretta Milan Sesto, Milan, Italy Grand Hotel Villa Torretta Milan Sesto Milan Italy 20099      
ELIXIR Heads of Nodes Retreat (2020)
6 - 7 May 2020
Woking, United KingdomELIXIR Heads of Nodes Retreat (2020) https://www.elixir-europe.org/events/elixir-heads-nodes-retreat-2020 https://tess.elixir-europe.org/events/elixir-heads-of-nodes-retreat-2020 The ELIXIR Heads of Nodes (HoN) will hold their annual Retreat from 6-7 May 2020 in Woking, UK. A full agenda and documents for this meeting will be made available to meeting participants in due course. Location Set in the Surrey country side, this venue has been chosen as an ideal venue just 30 minutes from central London and 20 minutes from Heathrow and Gatwick Airport. You are encouraged to travel to and from Heathrow Airport. Contacts For all documentation inquiries, please contact: Joana Wingender (firstname.lastname@example.org) For all logistical inquiries, please contact: Melissa Balzano (email@example.com) 2020-05-06 11:00:00 UTC 2020-05-07 15:00:00 UTC The Talbot Inn, Woking, United Kingdom The Talbot Inn Woking United Kingdom GU23 6BB      
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