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41 events found

Event types: Workshops and courses 

and

Scientific topics: ChIP-seq  or Bioinformatics 

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City: Bogota  or Copenhagen  or Edinburgh  or Ljubljana  or Fribourg  or Melbourne 

  • Graphical presentation of biological data

    27 June 2013

    Fribourg, Switzerland

    Graphical presentation of biological data https://tess.elixir-europe.org/events/graphical-presentation-of-biological-data-73ac2e42-31dc-4333-b8b5-b7111a3b9bff 2013-06-27 01:00:00 UTC 2013-06-27 01:00:00 UTC SIB Fribourg, Switzerland Fribourg Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • High Performance Computing (HPC) in Life Science

    12 September 2013

    Fribourg, Switzerland

    High Performance Computing (HPC) in Life Science https://tess.elixir-europe.org/events/high-performance-computing-hpc-in-life-science-6e9c8ba4-66ff-44cf-b0a1-0e9234e976fd 2013-09-12 01:00:00 UTC 2013-09-12 01:00:00 UTC SIB Fribourg, Switzerland Fribourg Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • NGS genome & transcriptome assembly and analysis

    16 - 18 June 2014

    Fribourg, Switzerland

    NGS genome & transcriptome assembly and analysis https://tess.elixir-europe.org/events/ngs-genome-transcriptome-assembly-and-analysis 2014-06-16 01:00:00 UTC 2014-06-18 01:00:00 UTC SIB Fribourg, Switzerland Fribourg Switzerland Transcriptomics Genomics Bioinformatics [] [] [] workshops_and_courses [] []
  • Searching for sequences: introduction to databases and sequence analysis tools

    28 August 2014

    Fribourg, Switzerland

    Searching for sequences: introduction to databases and sequence analysis tools https://tess.elixir-europe.org/events/searching-for-sequences-introduction-to-databases-and-sequence-analysis-tools 2014-08-28 01:00:00 UTC 2014-08-28 01:00:00 UTC SIB Fribourg, Switzerland Fribourg Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • Tutorial: Modelling and Simulation of Biological Models

    14 September 2014

    Melbourne, Australia

    Tutorial: Modelling and Simulation of Biological Models https://tess.elixir-europe.org/events/tutorial-modelling-and-simulation-of-biological-models 2014-09-14 01:00:00 UTC 2014-09-14 01:00:00 UTC Melbourne, Australia Melbourne Australia Systems biology Bioinformatics [] [] [] workshops_and_courses [] []
  • High Performance Computing (HPC) in Life Science

    12 November 2014

    Fribourg, Switzerland

    High Performance Computing (HPC) in Life Science https://tess.elixir-europe.org/events/high-performance-computing-hpc-in-life-science-014fae3a-f15d-459b-803d-4b3eac36f9c5 2014-11-12 00:00:00 UTC 2014-11-12 00:00:00 UTC SIB Fribourg, Switzerland Fribourg Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • DNA methylation and methylome analysis with NGS

    10 - 11 February 2015

    Fribourg, Switzerland

    DNA methylation and methylome analysis with NGS https://tess.elixir-europe.org/events/dna-methylation-and-methylome-analysis-with-ngs 2015-02-10 00:00:00 UTC 2015-02-11 00:00:00 UTC SIB Fribourg, Switzerland Fribourg Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • INTRODUCTION TO NGS DATA ANALYSIS WITH GALAXY

    29 - 30 June 2015

    Edinburgh, United Kingdom

    INTRODUCTION TO NGS DATA ANALYSIS WITH GALAXY https://tess.elixir-europe.org/events/introduction-to-ngs-data-analysis-with-galaxy 2015-06-29 01:00:00 UTC 2015-06-30 01:00:00 UTC Edinburgh, United Kingdom Edinburgh United Kingdom Bioinformatics [] [] [] workshops_and_courses [] []
  • INTRODUCTION TO PYTHON FOR BIOLOGISTS

    3 - 7 August 2015

    Edinburgh, United Kingdom

    INTRODUCTION TO PYTHON FOR BIOLOGISTS https://tess.elixir-europe.org/events/introduction-to-python-for-biologists 2015-08-03 01:00:00 UTC 2015-08-07 01:00:00 UTC Edinburgh, United Kingdom Edinburgh United Kingdom Bioinformatics [] [] [] workshops_and_courses [] []
  • High Performance Computing (HPC) in Life Sciences: Vital-IT & UniFr-UniBe Infrastructure Training

    3 December 2015

    Fribourg, Switzerland

    High Performance Computing (HPC) in Life Sciences: Vital-IT & UniFr-UniBe Infrastructure Training https://tess.elixir-europe.org/events/high-performance-computing-hpc-in-life-sciences-vital-it-unifr-unibe-infrastructure-training 2015-12-03 00:00:00 UTC 2015-12-03 00:00:00 UTC SIB Fribourg, Switzerland Fribourg Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • EMBL-ABR Training & Learning Workshop

    21 March 2016

    Melbourne, Australia

    EMBL-ABR Training & Learning Workshop https://tess.elixir-europe.org/events/embl-abr-training-learning-workshop This workshop will introduce and discuss the various steps in planning, delivering and assessing success of (Bioinformatics) training. It also provides an overview on key elements in learning. This course aims to make participants aware of the various crucial steps and elements of a hands on session and interactive training as well as where to find useful information. Participants will learn about key ways that adults learn, recognise different styles of learning and training, the roles of the trainer in the classroom and practical tips to ensure interactivity and course opening and closing strategies. This particular course was developed with the specific challenges of delivering bioinformatics training in mind and the settings of end user hands on training sessions instead of traditional lecture based training. 2016-03-21 09:00:00 UTC 2016-03-21 00:00:00 UTC VLSCI - University of Melbourne VLSCI, Melbourne, Australia VLSCI Melbourne Australia Bioinformatics [] [] [] workshops_and_courses [] ABRBPABioinformatics
  • 2-day Introduction to NGS Data Analysis

    14 - 15 June 2016

    Melbourne, Australia

    2-day Introduction to NGS Data Analysis https://tess.elixir-europe.org/events/2-day-introduction-to-ngs-data-analysis This Introduction to NGS Data Analysis is a two-day, hands-on workshop that offers attendees a basic understanding of NGS data analysis workflows. The workshop provides hands-on computational experience in analysis of NGS data using common analytical approaches for ChIP-Seq and RNA-Seq data. Workshop Outline -Topics covered by this workshop include: -An introduction to the command line interface and NGS file formats -Assessment of the quality of NGS sequence reads -Sequence alignment algorithms -Basic ChIP-Seq analysis -Basic RNA-Seq analysis 2016-06-14 09:00:00 UTC 2016-06-15 00:00:00 UTC Monash University Monash University, Melbourne, Australia Monash University Melbourne Australia Bioinformatics Data architecture, analysis and design ChIP-seq RNA-Seq [] [] [] workshops_and_courses [] ABRBPAIntroduction
  • Introduction to NGS Data Analysis

    14 - 15 June 2016

    Melbourne, Australia

    Introduction to NGS Data Analysis https://tess.elixir-europe.org/events/introduction-to-ngs-data-analysis This Introduction to NGS Data Analysis is a two-day, hands-on workshop that offers attendees a basic understanding of NGS data analysis workflows. The workshop provides hands-on computational experience in analysis of NGS data using common analytical approaches for ChIP-Seq and RNA-Seq data. 2016-06-14 09:00:00 UTC 2016-06-15 00:00:00 UTC Monash University Melbourne, Australia Melbourne Australia Bioinformatics Data architecture, analysis and design ChIP-seq RNA-Seq [] [] [] workshops_and_courses [] ABRBPABioinformaticsRNA
  • Advanced Python For Biologists

    25 July - 29 May 2016

    Edinburgh, United Kingdom

    Advanced Python For Biologists https://tess.elixir-europe.org/events/advanced-python-for-biologists-3b007f2f-c334-478c-8b5b-cdbb7a7ce5ee This workshop is aimed at people who already have a basic knowledge of Python and are interested in using the language to tackle larger problems. In it, we will look in detail at the parts of the language which are particularly useful in scientific programming, and at the tools Python offers for making development faster and easier. The course will use examples and exercises drawn from various aspects of bioinformatics work. After completing the workshop, students should be in a position to (1) take advantage of the advanced language features in their own programs and (2) use appropriate tools when developing software programs. 2016-07-25 09:00:00 UTC 2016-05-29 00:00:00 UTC The University of Edinburgh, Edinburgh, United Kingdom The University of Edinburgh Edinburgh United Kingdom EH9 3FD Bioinformatics Software engineering Biology [] [] [] workshops_and_courses [] []
  • EMBL-ABR Non-model Organism Annotation and Curation Cycle, Resources & Tools

    24 October 2016

    Melbourne, Australia

    EMBL-ABR Non-model Organism Annotation and Curation Cycle, Resources & Tools https://tess.elixir-europe.org/events/embl-abr-non-model-organism-annotation-and-curation-cycle-resources-tools-14f0432e-559f-46df-8dff-29d80182b193 A part of the data life-cycle series, this workshop would cover existing non-model organism annotation and curation tools. The workshop would have interactive sessions to engage the attendees in a discussion surrounding the practical use of resources and tools for their projects. Towards the end of the workshop, attendees would have a good understanding of non model annotation and curation in terms of needs and use of existing resources. 2016-10-24 09:00:00 UTC 2016-10-24 00:00:00 UTC VLSCI - University of Melbourne LAB-14, Melbourne, Australia LAB-14 Melbourne Australia Data management Computational biology Bioinformatics [] [] [] workshops_and_courses [] ABRVLSCIlifescienceBioinformatics
  • EMBL-ABR Best Practice workshop: data life-cycle – plants

    25 October 2016

    Melbourne, Australia

    EMBL-ABR Best Practice workshop: data life-cycle – plants https://tess.elixir-europe.org/events/embl-abr-best-practice-workshop-data-life-cycle-plants A part of the data life-cycle series, this workshop would cover best practice data life-cycle for plant researchers. The workshop would provide insights into different phases of data-life cycle. Towards the end of the workshop, attendees would have a good understanding of what is present or missing in terms of open data, Data Commons and FAIR principles for plant research domain in Australia. 2016-10-25 09:00:00 UTC 2016-10-25 00:00:00 UTC VLSCI - University of Melbourne LAB-14, Melbourne, Australia LAB-14 Melbourne Australia Data management Computational biology Bioinformatics [] [] [] workshops_and_courses [] ABRVLSCIlifescienceBioinformatics
  • EMBL-ABR Best Practice workshop: data life-cycle - animals

    26 October 2016

    Melbourne, Australia

    EMBL-ABR Best Practice workshop: data life-cycle - animals https://tess.elixir-europe.org/events/embl-abr-best-practice-workshop-data-life-cycle-animals A part of the data life-cycle series, this workshop would cover best practice data life-cycle for animal researchers. The workshop would provide insights into different phases of data-life cycle. Towards the end of the workshop, attendees would have a good understanding of what is present or missing in terms of open data, Data Commons and FAIR principles for animal research domain in Australia. 2016-10-26 09:00:00 UTC 2016-10-26 00:00:00 UTC VLSCI - University of Melbourne LAB-14, Melbourne, Australia LAB-14 Melbourne Australia Data management Computational chemistry Bioinformatics [] [] [] workshops_and_courses [] ABRVLSCIlifescienceBioinformatics
  • EMBL-ABR Best Practice Workshop: data life-cycle – microbes

    27 October 2016

    Melbourne, Australia

    EMBL-ABR Best Practice Workshop: data life-cycle – microbes https://tess.elixir-europe.org/events/embl-abr-non-model-organism-annotation-and-curation-cycle-resources-tools A part of the data life-cycle series, this workshop would cover best practice data life-cycle for microbial researchers. The workshop would provide insights into different phases of data-life cycle. Towards the end of the workshop, attendees would have a good understanding of what is present or missing in terms of open data, Data Commons and FAIR principles for microbiology research domain in Australia. 2016-10-27 09:00:00 UTC 2016-10-27 00:00:00 UTC VLSCI - University of Melbourne LAB-14, Melbourne, Australia LAB-14 Melbourne Australia Computational biology Data management Bioinformatics [] [] [] workshops_and_courses [] ABRVLSCIlifescienceBioinformatics
  • EMBL-ABR Best Practice Workshop: Data Life Cycle – Health

    28 October 2016

    Melbourne, Australia

    EMBL-ABR Best Practice Workshop: Data Life Cycle – Health https://tess.elixir-europe.org/events/embl-abr-best-practice-workshop-data-life-cycle-health A part of the data life-cycle series, this workshop would cover best practice data life-cycle for health researchers. The workshop would provide insights into different phases of data-life cycle. Towards the end of the workshop, attendees would have a good understanding of what is present or missing in terms of open data, Data Commons and FAIR principles for health research domain in Australia. 2016-10-28 09:00:00 UTC 2016-10-28 00:00:00 UTC VLSCI - University of Melbourne LAB-14, Melbourne, Australia LAB-14 Melbourne Australia Data management Computational biology Bioinformatics [] [] [] workshops_and_courses [] ABRVLSCIlifescienceBioinformatics
  • Oxford Nanopore MinION Sequencing - Data Handling, Analysis and Applications

    1 November 2016

    Edinburgh, United Kingdom

    Oxford Nanopore MinION Sequencing - Data Handling, Analysis and Applications https://tess.elixir-europe.org/events/oxford-nanopore-minion-sequencing-data-handling-analysis-and-applications Nanopore sequencing is one of the newest sequence technologies, in which single DNA molecules are sequenced directly, without the need for an intervening PCR amplification step or a chemical labelling step. It offers the potential of read lengths of tens of kilobases. The Oxford Nanopore MinION is a portable sequencing device that already has proven its power in e.g. the rapid identification of viral pathogens, the monitoring of ebola, genome assembly improvement, and environmental and food safety monitoring. As a member of the pre-release MinION Access Programme (MAP), Edinburgh Genomics has considerable experience in both generating and analyzing MinION sequence data, and also has published one of the first software tools to visualize and analyze these data (M Watson et al. poRe: an R package for the visualization and analysis of nanopore sequencing data. Bioinformatics. 2015 Jan 1;31(1):114-5). 2016-11-01 00:00:00 UTC 2016-11-01 00:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom Bioinformatics [] [] [] workshops_and_courses [] Bioinformatics
  • Introduction to the GVL and Galaxy

    7 November 2016

    Melbourne, Australia

    Introduction to the GVL and Galaxy https://tess.elixir-europe.org/events/introduction-to-the-gvl-and-galaxy Galaxy is an open source, web-based platform for accessible, reproducible, and transparent computational biomedical research. It allows users without programming experience to easily specify parameters and run individual tools as well as larger workflows. It also captures run information so that any user can repeat and understand a complete computational analysis. This beginners workshop hosted by VLSCI will introduce Galaxy's interface, tool use, histories, and workflows and get new users of the Genomics Virtual Laboratory up and running. This is a hands-on workshop and attendees should bring their own laptops. 2016-11-07 09:00:00 UTC 2016-11-07 00:00:00 UTC VLSCI - University of Melbourne Lab-14, Melbourne, Australia Lab-14 Melbourne Australia Bioinformatics Biomedical science Genomics [] [] [] workshops_and_courses [] ABRVLSCIBioinformatics
  • Introduction to ChIP-seq Data Analysis and Visualisation using Ensembl

    22 - 23 November 2016

    Edinburgh, United Kingdom

    Introduction to ChIP-seq Data Analysis and Visualisation using Ensembl https://tess.elixir-europe.org/events/introduction-to-chip-seq-data-analysis-and-visualisation-using-ensembl ChIP-seq (Chromatin ImmunoPrecipitation followed by Sequencing) is a popular high-throughput sequencing assay to identify binding sites of DNA-associated proteins and histone modifications. Determining how proteins interact with DNA and the epigenetic landscape is essential for elucidating the regulation of gene expression. The aim of this workshop is to familiarise the participants with the primary analysis of ChIP-seq data sets by providing a balanced set of lectures and practicals on analysis methodologies. Practicals include publicly available ChIP-seq datasets, processed using widely used and open-source software programs (e.g. FASTQC, BWA, samtools, bedtools, wiggletools, MACS2, MEME, TOMTOM, ngsplot) and visualised on the Ensembl genome browser. 2016-11-22 00:00:00 UTC 2016-11-23 00:00:00 UTC Edinburgh Genomics The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom ChIP-seq Bioinformatics [] [] [] workshops_and_courses [] BioinformaticsChIP-seq
  • Introduction to RAD-seq Data Analysis

    29 - 30 November 2016

    Edinburgh, United Kingdom

    Introduction to RAD-seq Data Analysis https://tess.elixir-europe.org/events/introduction-to-rad-seq-data-analysis-f4a75354-b605-4b30-ad75-60967b8a06f4 using next generation DNA sequencing. The principal advantage of RAD-seq is the ability to simultaneously examine tens of thousands of genetic loci with vastly reduced sequencing costs versus whole genome approaches. RAD-seq can be used on crosses of any design as well as wild populations and organisms with and without a reference genome. Applications include SNP discovery, linkage mapping and QTL mapping, but also more complex analyses such as population genomic and phylogeographic studies. The aim of this workshop is to familiarise researchers with RAD-seq data and to initiate them in the analysis by providing lectures and practicals on analysis methodologies. In the practicals Illumina-generated sequencing data and various widely used software programs (e.g. FastQC, BWA, samtools, IGV, Stacks) will be used. In the last section of this workshop we will focus on linkage analysis and population genomics. 2016-11-29 00:00:00 UTC 2016-11-30 00:00:00 UTC Edinburgh Genomics The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom Bioinformatics [] [] [] workshops_and_courses [] BioinformaticsRAD-seq
  • Introduction to Molecular Modelling & Visualisation for Life Sciences

    29 November 2016

    Melbourne, Australia

    Introduction to Molecular Modelling & Visualisation for Life Sciences https://tess.elixir-europe.org/events/introduction-to-molecular-modelling-visualisation-for-life-sciences-667d4af2-9938-413c-a933-f1dc88712b2e This VLSCI workshop introduces beginners to molecular modelling and visualisation techniques using packages such as VMD and NAMD. The participants will be given practical exercises to visualise molecules as well as learn how to submit jobs to the VLSCI clusters. It is recommended that participants attend Introduction to High Performance Computing at VLSCI prior to this workshop. If a participant is not familiar with using the command line, he/she should also attend the Introduction to Unix workshop. Attendees are requested to bring their laptops with the following programs installed before arriving: VMD (http://www.ks.uiuc.edu/Research/vmd/) Putty (http://www.chiark.greenend.org.uk/~sgtatham/putty/download.html) - only if they have Windows. 2016-11-29 09:00:00 UTC 2016-11-29 00:00:00 UTC VLSCI - University of Melbourne Lab-14, Melbourne, Australia Lab-14 Melbourne Australia Molecular modelling Bioinformatics [] [] [] workshops_and_courses [] ABRVLSCIBioinformatics
  • Intermediate Molecular Modelling & Visualisation for Life Sciences

    29 November 2016

    Melbourne, Australia

    Intermediate Molecular Modelling & Visualisation for Life Sciences https://tess.elixir-europe.org/events/intermediate-molecular-modelling-visualisation-for-life-sciences-e9e6da11-0063-4b6f-aca9-d869e351a110 This workshop is for the intermediate user who is already familiar with molecular modelling and submitting cluster jobs, and is interested in learning more advanced job submission and visualisation techniques. Topics include: advanced job submission scripts; data analysis; and molecular image and movie making. Participants are required to bring their own laptop computers with VMD or PyMol installed. VMD (http://www.ks.uiuc.edu/Research/vmd/) Putty (http://www.chiark.greenend.org.uk/~sgtatham/putty/download.html) - only if the participant has Windows. 2016-11-29 09:00:00 UTC 2016-11-29 00:00:00 UTC VLSCI - University of Melbourne Lab-14, Melbourne, Australia Lab-14 Melbourne Australia Molecular modelling Bioinformatics [] [] [] workshops_and_courses [] ABRVLSCIBioinformatics
  • Introduction to Python for Biologists

    12 - 16 December 2016

    Edinburgh, United Kingdom

    Introduction to Python for Biologists https://tess.elixir-europe.org/events/introduction-to-python-for-biologists-d358d018-fabc-4a90-9b9c-cfd4475411f5 Python is a dynamic, readable language that is a popular platform for all types of bioinformatics work, from simple one-off scripts to large, complex software projects. This workshop is aimed at complete beginners and assumes no prior programming experience. It gives an overview of the language with an emphasis on practical problem-solving, using examples and exercises drawn from various aspects of bioinformatics work. The workshop is structured so that the parts of the language most useful for bioinformatics are introduced as early as possible, and that students can start writing plausibly-useful programs after the first few sessions. After completing the workshop, students should be in a position to (1) apply the skills they have learned to tackling problems in their own research and (2) continue their Python education in a self-directed way. 2016-12-12 00:00:00 UTC 2016-12-16 00:00:00 UTC Edinburgh Genomics The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom Software engineering Bioinformatics [] [] [] workshops_and_courses [] BioinformaticsComputerprogrammingPython
  • Linux for Genomics

    20 January 2017

    Edinburgh, United Kingdom

    Linux for Genomics https://tess.elixir-europe.org/events/linux-for-genomics-04835f08-3c91-4dc6-be5c-9ccb661c495e Genomic studies produce vast amounts of data, usually in the form of very large text files. Linux is particularly suited to working with such files, and is therefore arguably one of the most important tools in a bioinformatician’s toolkit. The Linux command-line enables one to view, filter and manipulate large text files that are difficult or impossible to handle with applications like Word or Excel, write pipelines to perform certain tasks, and run bioinformatics software for which no web interface is available. In this workshop we will first cover the most used Linux commands, followed by a short introduction to several popular command-line tools that were especially developed for genomics as well as file formats commonly used in genomics (BED, FASTA, FASTQ, GFF/GTF, SAM/BAM, VCF). 2017-01-20 00:00:00 UTC 2017-01-20 00:00:00 UTC Edinburgh Genomics The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom Bioinformatics [] [] [] workshops_and_courses [] BioinformaticsLinux
  • Introduction to Linux and Workflows for Biologists

    24 - 28 April 2017

    Edinburgh, United Kingdom

    Introduction to Linux and Workflows for Biologists https://tess.elixir-europe.org/events/introduction-to-linux-and-workflows-for-biologists Most high-throughput bioinformatics work these days takes place on the Linux command line. The programs which do the majority of the computational heavy lifting — genome assemblers, read mappers, and annotation tools — are designed to work best when used with a command-line interface. Because the command line can be an intimidating environment, many biologists learn the bare minimum needed to get their analysis tools working. This means that they miss out on the power of Linux to customise their environment and automate many parts of the bioinformatics workflow. This course will introduce the Linux command line environment from scratch and teach students how to make the most of its tools to achieve a high level of productivity when working with biological data. 2017-04-24 00:00:00 UTC 2017-04-28 00:00:00 UTC Edinburgh Genomics The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom Bioinformatics [] [] [] workshops_and_courses [] BioinformaticsLinuxWorkflows
  • GATK Best Practices for Variant Discovery

    17 - 19 July 2017

    Edinburgh, United Kingdom

    Elixir node event
    GATK Best Practices for Variant Discovery https://tess.elixir-europe.org/events/gatk-best-practices-for-variant-discovery This workshop will focus on the core steps involved in calling variants with the Broad’s Genome Analysis Toolkit, using the Best Practices developed by the GATK team. You will learn why each step is essential to the variant discovery process, what are the operations performed on the data at each step, and how to use the GATK tools to get the most accurate and reliable results out of your dataset. In the course of this workshop, we highlight key functionalities such as the GVCF workflow for joint variant discovery in cohorts, RNAseq-specific processing, and somatic variant discovery using MuTect2. We also preview capabilities of the upcoming GATK version 4, including a new workflow for CNV discovery, and we demonstrate the use of pipelining tools to assemble and execute GATK workflows. 2017-07-17 09:00:00 UTC 2017-07-19 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom Bioinformatics Genomics Edinburgh Genomics Bert Overduin - bert.overduin@ed.ac.uk [] [] workshops_and_courses [] Variant discoveryGenomicsBioinformatics
  • Software Carpentry - Introduction to Programming in R

    8 August 2017

    Melbourne, Australia

    Software Carpentry - Introduction to Programming in R https://tess.elixir-europe.org/events/software-carpentry-introduction-to-programming-in-r 2017-08-08 09:30:00 UTC 2017-08-08 16:30:00 UTC Intersect Australia HS3 401, La Trobe University - Bundoora , Melbourne, Australia HS3 401, La Trobe University - Bundoora Melbourne Australia Bioinformatics La Trobe University [] [] workshops_and_courses [] R-programming

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