Organizer: de.NBI

Start: Sunday, 03 November 2019 @ 09:00

End: Sunday, 03 November 2019 @ 17:00

Venue: Göttingen

City: Göttingen

Country: Germany

Description:

Educators:
Timo Sachsenberg, Alexander Wulf (CIBI)

Date:
03.11.2019

Location:
Workshop 9th Symposium on Structural Proteomics
Göttingen, Germany

Contents:
Proteins and RNA form major classes of biomolecules. Protein-RNA complexes are essential for cellular processes like translation or splicing. In Kramer, Sachsenberg et. al, (Nat Methods, 2014) we demonstrated how protein-RNA interactions can be detected and localized at the level of single amino acids with our tool RNPxl. In this training event, we describe our experimental and computational approach to protein-RNA analysis from UV-induced cross-linking experiments.

Software Requirements:
none

Keywords:
LC-MS based proteomics, OpenMS, workflows, cross-linking, data analysis

Tools:
OpenMS

Event type:
  • Meetings and conferences
Protein-RNA cross-linking with RNPxl/OpenMS - SSP2019 https://tess.elixir-europe.org/events/protein-rna-cross-linking-with-rnpxl-openms-ssp2019 Educators: Timo Sachsenberg, Alexander Wulf (CIBI) Date: 03.11.2019 Location: Workshop 9th Symposium on Structural Proteomics Göttingen, Germany Contents: Proteins and RNA form major classes of biomolecules. Protein-RNA complexes are essential for cellular processes like translation or splicing. In Kramer, Sachsenberg et. al, (Nat Methods, 2014) we demonstrated how protein-RNA interactions can be detected and localized at the level of single amino acids with our tool RNPxl. In this training event, we describe our experimental and computational approach to protein-RNA analysis from UV-induced cross-linking experiments. Software Requirements: none Keywords: LC-MS based proteomics, OpenMS, workflows, cross-linking, data analysis Tools: OpenMS 2019-11-03 09:00:00 UTC 2019-11-03 17:00:00 UTC de.NBI Göttingen, Göttingen, Germany Göttingen Göttingen Germany [] [] [] meetings_and_conferences [] []