Organizer: Dr. Dena Leshkowitz

Start: Monday, 09 September 2019 @ 13:30

End: Monday, 09 September 2019 @ 16:00

Venue: Feinberg Room B

City: Rehovot

County: Israel

Country: Israel

Scientific topic: RNA-Seq

Description:

RNA-Seq (including bulk Mars-seq) technology is routinely used to characterize the transcriptome and detect gene expression differences among cell types, genotypes and conditions. In order to enable fast and user-friendly data analysis, we developed an intuitive and scalable transcriptome pipeline: UTAP that executes the full process on Weizmann computer cluster (WEXAC), starting from sequences and ending with a comprehensive report. The workshop includes a lecture regarding the analysis steps UTAP performs and a hands on session to run the pipeline and understand the outputs it produces.

Registration is required and will open near the workshop date.

First you need to register for the BBCU activities here:
http://bip.weizmann.ac.il/activbin/events
(click on the LogIn button) and then you need to register for the workshop. (click on the Register button)

Event type:
  • Workshops and courses
Eligibility:
  • Registration of interest
Introducing UTAP: User-friendly Transcriptome Analysis Pipeline https://tess.elixir-europe.org/events/introducing-utap-user-friendly-transcriptome-analysis-pipeline RNA-Seq (including bulk Mars-seq) technology is routinely used to characterize the transcriptome and detect gene expression differences among cell types, genotypes and conditions. In order to enable fast and user-friendly data analysis, we developed an intuitive and scalable transcriptome pipeline: UTAP that executes the full process on Weizmann computer cluster (WEXAC), starting from sequences and ending with a comprehensive report. The workshop includes a lecture regarding the analysis steps UTAP performs and a hands on session to run the pipeline and understand the outputs it produces. Registration is required and will open near the workshop date. First you need to register for the BBCU activities here: http://bip.weizmann.ac.il/activbin/events (click on the LogIn button) and then you need to register for the workshop. (click on the Register button) 2019-09-09 13:30:00 UTC 2019-09-09 16:00:00 UTC Dr. Dena Leshkowitz Feinberg Room B, Rehovot, Israel Feinberg Room B Rehovot Israel Israel RNA-Seq [] [] [] workshops_and_courses registration_of_interest []