Date: 7 - 8 September 2024

This workshop is intended to provide an introduction to machine learning and its application to bioinformatics. This workshop is not intended for machine learning experts. Instead, it targets biologists or other life scientists who want to understand what machine learning is, what it can do and how it can be used for a variety of bioinformatic or medical informatics applications.

Country: Virtual

Prerequisites:

Familiar with the basics of Python and/or R. You will also require your own laptop computer. Minimum requirements: 1024×768 screen resolution, 1.5GHz CPU, 2GB RAM, 10GB free disk space, recent versions of Windows, Mac OS X or Linux (Most computers purchased in the past 3-4 years likely meet these requirements). If you do not have access to your own computer, you may loan one from the CBW. Please contact support@bioinformatics.ca for more information. This workshop requires participants to complete pre-workshop tasks and readings.

Learning objectives:

Students will gain experience in: Applications and Limitations of Machine Learning and Deep Learning Decision Trees and Random Forests – how they work, how they are coded in Python and R, and how they can be used in bioinformatic applications (biomarker discovery and modeling) Artificial Neural Networks (ANNs) – how they work, how data is encoded, how they are coded in Python and R, and how they can be used in bioinformatic applications (classification and secondary structure prediction) Large Language Models (LLMs) – how they work, and how they can be used in bioinformatics applications (text mining, information extraction) Using Machine Learning tools (Decision Trees, ANNs and HMMs) on the Web (SciKit Learn and Keras/Colab)

Capacity: 40

Event types:

  • Workshops and courses


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