Content Providers
Keywords: Computing or Data sharing or immunology or omics or product safety
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Flemish Supercomputer Centre
The Flemish Supercomputer Centre (VSC) is a virtual centre making supercomputer infrastructure available for both the academic and industrial world. This centre is managed by the Research Foundation - Flanders (FWO) in partnership with the five Flemish university associations.
0 events (66 past events)Flemish Supercomputer Centre https://www.vscentrum.be https://tess.elixir-europe.org/content_providers/flemish-supercomputer-centre The Flemish Supercomputer Centre (VSC) is a virtual centre making supercomputer infrastructure available for both the academic and industrial world. This centre is managed by the Research Foundation - Flanders (FWO) in partnership with the five Flemish university associations. /system/content_providers/images/000/000/067/original/logo_VSC_CMYK-1.png?1487672198 -
Birmingham Metabolomics Training Centre
Providing training to empower the next generation of metabolomics researchers.
The Birmingham Metabolomics Training Centre provides training to the metabolomics community in both analytical and computational methods. The training centre partners with both the Phenome Centre Birmingham and the...
0 events (26 past events)Birmingham Metabolomics Training Centre https://www.birmingham.ac.uk/facilities/metabolomics-training-centre/course-list.aspx https://tess.elixir-europe.org/content_providers/birmingham-metabolomics-training-centre Providing training to empower the next generation of metabolomics researchers. The Birmingham Metabolomics Training Centre provides training to the metabolomics community in both analytical and computational methods. The training centre partners with both the Phenome Centre Birmingham and the NERC Biomolecular Analysis Facility to provide vocational training courses in clinical and environmental metabolomics. We offer a combination of both face-to-face and online courses. The Birmingham Metabolomics Training Centre is directed by Dr Warwick Dunn, Professor Mark Viant, Dr Ralf Weber and Dr Catherine Winder. /system/content_providers/images/000/000/084/original/12106_BMTC_lock-up_AW-01.jpg?1508159124 -
NanoCommons
NanoCommons will deliver a sustainable and openly accessible nanoinformatics framework (knowledgebase and integrated computational tools, supported by expert advice, data interpretation and training), for assessment of the risks of NMs, their products and their formulations. NanoCommons combines...
9 training materials0 events (21 past events)NanoCommons https://www.nanocommons.eu/ https://tess.elixir-europe.org/content_providers/nanocommons NanoCommons will deliver a sustainable and openly accessible nanoinformatics framework (knowledgebase and integrated computational tools, supported by expert advice, data interpretation and training), for assessment of the risks of NMs, their products and their formulations. NanoCommons combines Joint Research Activities to implement the nanoinformatics Knowledge Commons, Networking Activities to facilitate engagement with the research community, industry and regulators, and provision of funded Access to the nanoinformatics tools via funded calls for Transnational Access. /system/content_providers/images/000/000/099/original/NanoCommons-Logo-Sphere-Trans-White-circle-512px.png?1650899421 -
Biomedical Sciences Research Center "Alexander Fleming"
The Biomedical Sciences Research Center "Alexander Fleming" is a non-profit research organisation based in Vari, Athens, Greece.
Since the beginning of its operations in 1998, the Center develops basic as well as translational and applied research programs at the cutting edge of modern...
1 training materialBiomedical Sciences Research Center "Alexander Fleming" https://www.fleming.gr/ https://tess.elixir-europe.org/content_providers/biomedical-sciences-research-center-alexander-fleming The Biomedical Sciences Research Center "Alexander Fleming" is a non-profit research organisation based in Vari, Athens, Greece. Since the beginning of its operations in 1998, the Center develops basic as well as translational and applied research programs at the cutting edge of modern biomedical sciences. Currently, the Center hosts 14 research groups distributed in 4 Institutes (Immunology, Molecular Oncology, Molecular Biology and Genetics, Cellular & Developmental Biology). Over the short period since its establishment, BSRC "Alexander Fleming" has gained extensive visibility in the European science arena. Fleming researchers have established transgenic animal models for rheumatoid arthritis, inflammatory bowel disease and multiple sclerosis and these models have served as a basis for multiple collaborations with the international biopharmaceutical industry in the evaluation of novel therapeutic compounds, or as tools for collaborative R&D. The Center is equipped with state-of-the-art Core Units which include: an Expression Profiling Facility, a Flow Cytometry Facility, a Protein Chemistry Lab, a Transgenics and gene targeting Unit, and a BioIT Unit, all of which serve internal collaborations, as well as external partners in academia and industry. The Center also runs an Innovation and Enterprise Unit that facilitates the protection and exploitation of the Center’s research and technologies. Fleming operates its own Animal House, which can house up to 15,000 mice, and has its own complete mouse histopathology unit. Fleming’s Animal house (certified with ISO 9001) provides husbandry of animals and services to the biomedical research community since 2001. It covers an area of approximately 600 m2 within the Center and is equipped with highly automated systems that provide the best possible conditions for mouse reproduction and maintenance. Its main activity is the reproduction and maintenance of mice stocks either of inbred strains or genetically engineered mice, such as transgenic and knockout mouse lines, as well as chemically induced mutants developed by Fleming researchers. The Animal House has a capacity to house more than 18,000 mice and is currently the largest Mouse Unit in Greece in terms of number and variety of mice. The Facility became a full member of EMMA in 2009. Main areas of research: Functional genomics and proteomics; Molecular and cellular immunology; Animal models of human disease; Transcriptional and post-transcriptional mechanisms of gene regulation; DNA repair; Stem Cell differentiation; Epigenetics; Learning and memory; ECM biology. Fields of excellence: Molecular mechanisms of disease (inflammation, cancer, metabolic syndrome, CNS disorders). /system/content_providers/images/000/000/051/original/logo.png?1469458221 -
Workflow4metabolomics
In the context of collaboration between metabolomics (MetaboHUB French infrastructure) and bioinformatics platforms (IFB: Institut Français de Bioinformatique), we have developed full LC/MS, FIA-MS, GC/MS and NMR pipelines using Galaxy framework for data analysis including preprocessing,...
Workflow4metabolomics https://workflow4metabolomics.org https://tess.elixir-europe.org/content_providers/workflow4metaolomics In the context of collaboration between metabolomics (MetaboHUB French infrastructure) and bioinformatics platforms (IFB: Institut Français de Bioinformatique), we have developed full LC/MS, FIA-MS, GC/MS and NMR pipelines using Galaxy framework for data analysis including preprocessing, normalization, quality control, statistical analysis (Univariate, Multivariate PLS/OPLS) and annotation steps. Those modular and extensible workflows are composed with existing components (XCMS and CAMERA packages, etc.) but also a whole suite of complementary homemade tools. This implementation is accessible through a web interface, which guarantees the parameters completeness. The advanced features of Galaxy have made possible the integration of components from different sources and of different types. Thus, an extensible Virtual Research Environment (VRE) is offered to metabolomics communities (platforms, end users, etc.), and enables preconfigured workflows sharing for new users, but also experts in the field. /system/content_providers/images/000/000/659/original/17082156.png?1667905557