Content Providers
Content provider type: Project
and Keywords: Bioinformatics or Biostatistics or Cancer or Data Analysis or HPC or RDM or Workflows or bioinformatics or biomolecular or infrastructure or metabolome or open educational resorce
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ELXIR-UK DaSH
In 2021, ELIXIR-UK was granted a UKRI award for the ELIXIR-UK DaSH Fellowship. The University of Bradford leads the project with a delivery team at Cardiff University, the Earlham Institute, the University of Manchester, and the University of Oxford.
The project aims to embed Research Data...
70 training materials0 events (6 past events)ELXIR-UK DaSH https://elixiruknode.org/projects/elixir-uk-dash/ https://tess.elixir-europe.org/content_providers/elxir-uk-dash In 2021, ELIXIR-UK was granted a UKRI award for the ELIXIR-UK DaSH Fellowship. The University of Bradford leads the project with a delivery team at Cardiff University, the Earlham Institute, the University of Manchester, and the University of Oxford. The project aims to embed Research Data Management (RDM) know-how into UK universities and institutes by producing and delivering training in FAIR data stewardship using ELIXIR-UK knowledge and resources, such as the RDMkit and the FAIR Cookbook. It focuses on building capacity and professionalising data stewardship while leveraging the local expertise within diverse UK institutions – creating a data management culture change from within the institutions. /system/content_providers/images/000/000/652/original/elixir-uk-dash-logo.svg?1660752689 -
Bioinformatics and Biomathematics Training Hub
The Bioinformatics and Biomathematics Training Hub (BBTH) is a BBSRC-funded collaborative project to coordinate the development and sharing of training materials and expertise across the UK’s National Institutes of Bioscience (NIB — http://www.nib.ac.uk/) for the increasingly important areas of...
62 training materialsBioinformatics and Biomathematics Training Hub http://www.earlham.ac.uk/bbsrc-bioinformatics-and-biomathematics-training-hub https://tess.elixir-europe.org/content_providers/bioinformatics-and-biomathematics-training-hub The Bioinformatics and Biomathematics Training Hub (BBTH) is a BBSRC-funded collaborative project to coordinate the development and sharing of training materials and expertise across the UK’s National Institutes of Bioscience (NIB — http://www.nib.ac.uk/) for the increasingly important areas of bioinformatics and biomathematics. Guided by our NIB partners, researcher surveys, and interactions with interested bodies such as Elixir-UK, we will work to ensure that best use is made of existing assets and capabilities, that best practice is shared across the NIB, and that redundant effort is minimised going forwards. /system/content_providers/images/000/000/061/original/BBTH_logo.png?1480508618 -
BioExcel
BioExcel is the leading European Centre of Excellence for Computational Biomolecular Research. BioExcel develops some of the most popular open-source applications for modelling and simulations of biomolecular systems along with user-friendly workflows and container solutions. The software stack...
5 events (12 past events)BioExcel http://bioexcel.eu/ https://tess.elixir-europe.org/content_providers/bioexcel BioExcel is the leading European Centre of Excellence for Computational Biomolecular Research. BioExcel develops some of the most popular open-source applications for modelling and simulations of biomolecular systems along with user-friendly workflows and container solutions. The software stack comes with great performance and scalability capabilities for extreme-scale utilization of the world's largest high-performance computing (HPC) and high-throughput computing (HTC) compute resource. /system/content_providers/images/000/000/053/original/BioExcel_logo_payoff.png?1470306206 -
PerMedCoE
PerMedCoE is the HPC/Exascale Centre of Excellence for Personalised Medicine in Europe.
12 training materialsPerMedCoE https://permedcoe.eu https://tess.elixir-europe.org/content_providers/permedcoe PerMedCoE is the HPC/Exascale Centre of Excellence for Personalised Medicine in Europe. /system/content_providers/images/000/000/637/original/LOGO_PerMedCoE.jpg?1636473064 -
OpenRiskNet
The main objective of OpenRiskNet is to develop an open e-Infrastructure providing resources and services to a variety of communities requiring risk assessment, including chemicals, cosmetic ingredients, therapeutic agents and nanomaterials.
OpenRiskNet is
* a virtual research environment for...0 events (10 past events)OpenRiskNet https://openrisknet.org/ https://tess.elixir-europe.org/content_providers/openrisknet The main objective of OpenRiskNet is to develop an open e-Infrastructure providing resources and services to a variety of communities requiring risk assessment, including chemicals, cosmetic ingredients, therapeutic agents and nanomaterials. OpenRiskNet is * a virtual research environment for predictive toxicology and chemical and nanomaterial risk assessment, * harmonising access to data and facilitating interoperability of software, * easily deployable to single computers, public and in-house cloud solutions, * addressing the needs of industry and academic researchers, risk assessors, regulators and informed public. OpenRiskNet (Grant Agreement 731075) is a 3-years project funded by the European Commission within the Horizon2020 Programme /system/content_providers/images/000/000/097/original/ORN-Web_Logo3.png?1533933310 -
UNIVERSE-HPC project
UNIVERSE-HPC project is developing and piloting the curriculum and necessary course materials to underpin a professional training programme in RSE and HPC, supported by cohort- and community-building activities, acting as a knowledge integration...
5 training materialsUNIVERSE-HPC project https://excalibur.ac.uk/projects/universe-hpc/ https://tess.elixir-europe.org/content_providers/universe-hpc-project [UNIVERSE-HPC project](https://excalibur.ac.uk/projects/universe-hpc/) is developing and piloting the curriculum and necessary course materials to underpin a professional training programme in RSE and HPC, supported by cohort- and community-building activities, acting as a knowledge integration hub for those with a stake in education and training for RSEs, including other [ExCALIBUR projects](https://excalibur.ac.uk/projects), those extending Carpentries training for HPC and RSE, and existing and future initiatives in this area. The project brings together partners with expertise in training from different areas: Edinburgh (EPCC MSc in HPC and Edinburgh Carpentries), Oxford (SABS R3 CDT and RSE group), Southampton (research software engineering and Carpentries), and Imperial (community building and RSLondon). -
Cloud-SPAN
Cloud-SPAN deploys high quality learning resources that will train researchers to effectively generate and analyse a range of 'omics data using Cloud computing resources. The following activities and learning materials related to the project:
- Prenomics
- Genomics
- Create your own AWS...1 training materialCloud-SPAN https://cloud-span.york.ac.uk/ https://tess.elixir-europe.org/content_providers/cloud-span Cloud-SPAN deploys high quality learning resources that will train researchers to effectively generate and analyse a range of 'omics data using Cloud computing resources. The following activities and learning materials related to the project: - Prenomics - Genomics - Create your own AWS instance - Metagenomics - Statistically useful experimental design - Automation & pipelines (WIP) - Core R (WIP) /system/content_providers/images/000/000/658/original/cloud-span-logo-square.png?1666085149 -
ExCALIBUR
Exascale Computing ALgorithms & Infrastructures Benefiting UK Research (ExCALIBUR) is a UK research programme that aims to deliver the next generation of high-performance simulation software for the highest-priority fields in UK research. It started in October 2019 and...
1 training materialExCALIBUR https://excalibur.ac.uk/ https://tess.elixir-europe.org/content_providers/excalibur [Exascale Computing ALgorithms & Infrastructures Benefiting UK Research](https://excalibur.ac.uk/) (ExCALIBUR) is a UK research programme that aims to deliver the next generation of high-performance simulation software for the highest-priority fields in UK research. It started in October 2019 and will run through until March 2025, redesigning high priority computer codes and algorithms to meet the demands of both advancing technology and UK research. /system/content_providers/images/000/000/664/original/ExCALIBUR_Brand_20Logos_ExCALIBUR_Preview_Negative.jpg?1673340574 -
EOSC4Cancer
EOSC4Cancer will make diverse types of cancer data accessible: genomics, imaging, medical, clinical, environmental and socio-economic. It will use and enhance federated and interoperable systems for securely identifying, sharing, processing and reusing FAIR data across borders and offer them via...
1 training material0 events (1 past event)EOSC4Cancer https://eosc4cancer.eu/ https://tess.elixir-europe.org/content_providers/eosc4cancer EOSC4Cancer will make diverse types of cancer data accessible: genomics, imaging, medical, clinical, environmental and socio-economic. It will use and enhance federated and interoperable systems for securely identifying, sharing, processing and reusing FAIR data across borders and offer them via community-driven analysis environments. EOSC4Cancer’s well curated data sets will be essential input for reproducible and robust analytics and computational methods – including machine learning and artificial intelligence. EOSC4Cancer’s five use cases will cover the patient journey from cancer prevention over diagnosis to treatment, laying the foundation of data trajectories and workflows for future European Cancer Mission projects. /system/content_providers/images/000/000/747/original/Logo-eosc-cancer-RGB-horizontal-STANDARD.png?1711439233 -
H3ABioNet
H3ABioNet is a Pan African Bioinformatics Network for the Human Heredity and Health in Africa (H3Africa) consortium.
H3ABioNet was established to develop bioinformatics capacity in Africa and specifically to enable genomics data analysis by H3Africa researchers across the continent. H3ABioNet...0 events (1 past event)H3ABioNet https://h3abionet.org https://86.50.28.174/content_providers/h3abionet H3ABioNet is a Pan African Bioinformatics Network for the Human Heredity and Health in Africa (H3Africa) consortium. H3ABioNet was established to develop bioinformatics capacity in Africa and specifically to enable genomics data analysis by H3Africa researchers across the continent. H3ABioNet is developing human capacity through training and support for data analysis, and facilitating access to informatics infrastructure by developing or providing access to pipelines and tools for human, microbiome and pathogen genomic data analysis. /system/content_providers/images/000/000/803/original/LOGO-HEADER-2.png?1726047187