Content Providers
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BioData.pt
BioData.pt is a distributed Research Infrastructure dedicated to data management in the fields of life and health sciences. It has the mission is to support the organisation and valorisation of biological data generated by research, clinical, and industrial activities in Portugal, through...
4 training materials0 events (8 past events)BioData.pt https://biodata.pt https://86.50.28.174/content_providers/biodata-pt BioData.pt is a distributed Research Infrastructure dedicated to data management in the fields of life and health sciences. It has the mission is to support the organisation and valorisation of biological data generated by research, clinical, and industrial activities in Portugal, through informatics, bioinformatics, and data management resources. Additionally, it is responsible for managing the Portuguese node of ELIXIR. /system/content_providers/images/000/000/806/original/BioDataPT_V.svg?1726234155 -
Babraham Institute Bioinformatics Group
The Babraham Institute Bioinformatics Groupwprovides bioinformatics services
to the 30 research groups which form the institute as well as providing an
external commercial consultancy service. The group...0 events (6 past events)Babraham Institute Bioinformatics Group https://www.bioinformatics.babraham.ac.uk https://tess.elixir-europe.org/content_providers/babraham-institute-bioinformatics-group The Babraham Institute Bioinformatics Groupwprovides bioinformatics services to the 30 research groups which form the institute as well as providing an external commercial consultancy service. The group has experience in a wide variety of areas of bioinformatics including genomics, proteomics, statistics and microarrays as well as having extensive experience of custom software development. /system/content_providers/images/000/000/105/original/babraham_bioinformatics.gif?1541131206 -
Data Steward team Ghent University
6 training materialsData Steward team Ghent University https://osf.io/bhy8w/ https://tess.elixir-europe.org/content_providers/data-steward-team-ghent-university /system/content_providers/images/000/000/169/original/ugent-banner.png?1607441392 -
NRIS
An important foundation for the successful collaboration on e-infrastructure in Norway is NRIS - a collaboration of five organisations to pool competencies, resources and services. The collaboration was until recently known as "the Metacenter".
NRIS consists of highly qualified IT staff at...
0 events (6 past events)NRIS https://www.sigma2.no/nris https://tess.elixir-europe.org/content_providers/sigma2-nris An important foundation for the successful collaboration on e-infrastructure in Norway is NRIS - a collaboration of five organisations to pool competencies, resources and services. The collaboration was until recently known as "the Metacenter". NRIS consists of highly qualified IT staff at the four universities NTNU, the Universities of Bergen, Oslo and Tromsø and employees at Sigma2, counting almost 50 people. The purpose is a geographically distributed competence network that ensures that all researchers who use the national e-infrastructure have quick and easy access to domain-specific support close to the user. /system/content_providers/images/000/000/635/original/NRIS-Logo.png?1653914194 -
Thermo Fisher Scientific
Thermo Fisher Scientific is the world leader in serving science, a company with approximately 50,000 employees in 50 countries, creating products and services that enable our customers to make the world healthier, cleaner and safer.
Our EMEA team runs workshops and a bioinformatics career...
0 events (5 past events)Thermo Fisher Scientific https://learn.thermofisher.com/europe/courses/ https://tess.elixir-europe.org/content_providers/thermo-fisher-scientific Thermo Fisher Scientific is the world leader in serving science, a company with approximately 50,000 employees in 50 countries, creating products and services that enable our customers to make the world healthier, cleaner and safer. Our EMEA team runs workshops and a bioinformatics career professional development programme across Europe. Our bioinformatics training programme is not limited to Ion Torrent™ users, but anybody dealing with NGS data analysis. Molecular biologists and bench scientists with an interest to go beyond the graphic interface will enjoy our courses. We offer you a chance to explore the open source world associated to bioinformatics with our experts. /system/content_providers/images/000/000/052/original/Thermo_logo.jpg?1469615410 -
NEOF Training
Bioinformatics courses
We provide training courses to support a range of capabilities including, for example, genome assembly, metabarcoding, population genomics and RNA sequencing. We aim to support the training that is in most demand from our community.These are some of the training...
0 events (5 past events)NEOF Training https://neof.org.uk/training/ https://tess.elixir-europe.org/content_providers/neof-training Bioinformatics courses We provide training courses to support a range of capabilities including, for example, genome assembly, metabarcoding, population genomics and RNA sequencing. We aim to support the training that is in most demand from our community. These are some of the training courses we are running online in 2021 and 2022. Our plan is to deliver these courses online until further notice, and we hope to be running workshops in person in future. Registration closes on Monday at noon 2 weeks prior to the start of each course; selected attendees are then invited to confirm their attendance. If you have not heard from us then, please check your spam folder in case the message is there. /system/content_providers/images/000/000/638/original/neof.png?1644251203 -
Danish National Health Data Science Sandbox
The Health Data Science Sandbox is a national project coordinated by the Center for Health Data Science at the University of Copenhagen. Advisors and project data scientists are located at five Danish universities. We are building a data science sandbox for students and...
5 training materialsDanish National Health Data Science Sandbox https://hds-sandbox.github.io https://tess.elixir-europe.org/content_providers/danish-national-health-data-science-sandbox The Health Data Science Sandbox is a national project coordinated by the [Center for Health Data Science](https://heads.ku.dk/) at the University of Copenhagen. Advisors and project data scientists are located at five Danish universities. We are building a data science sandbox for students and researchers that contains non-person-sensitive datasets spanning key health data domains – electronic health records, omics data such as genomics and transcriptomics, images, and wearable device data. Datasets are sourced from public databases or generated via privacy-preserving approaches to synthetic health data. We are building modules that pair topical datasets with recommended analysis tools, pipelines, and learning materials/tutorials in a portable, containerized format. Our initial aim is to support university courses and programs in health data science and personal medicine, with broader environment access for researchers and university students planned in the future. Our sandbox for exploring health data science techniques will allow low-stakes guided learning and development followed by a smooth transition to a secure environment where users’ knowledge and tools can be applied to sensitive data. The sandbox environment is hosted on Danish supercomputers providing compute power while modules are publicly accessible on [GitHub](https://github.com/hds-sandbox). We thank the Novo Nordisk Foundation for funding support via the Data Science Research Infrastructure initiative. /system/content_providers/images/000/000/669/original/logo.png?1678825482 -
LIPID MAPS
LIPID Metabolites And Pathways Strategy (LIPID MAPS®) is a multi-institutional supported website and database that provides access to a large number of globally used lipidomics resources. LIPID MAPS® has internationally led the field of lipid curation, classification, and nomenclature since 2003....
5 training materials0 events (1 past event)LIPID MAPS https://www.lipidmaps.org/ https://tess.elixir-europe.org/content_providers/lipid-maps-8d2f062e-3051-4752-ba8d-0626399e2e91 LIPID Metabolites And Pathways Strategy (LIPID MAPS®) is a multi-institutional supported website and database that provides access to a large number of globally used lipidomics resources. LIPID MAPS® has internationally led the field of lipid curation, classification, and nomenclature since 2003. We strive to produce new open-access databases, informatics tools and lipidomics-focused training activities will be generated and made publicly available for researchers studying lipids in health and disease. LIPID MAPS® Lipidomics Gateway was created in 2003 via an NIH “Glue Grant” to provide access to lipid nomenclature, databases, tools, protocols, standards, tutorials, meetings, publications, and other resources to serve the international lipid research community. LIPID MAPS® is currently funded by a multi-institutional grant from Wellcome, held jointly by Cardiff University, University of California San Diego, the Babraham Institute Cambridge, and Swansea University, as well as an Innovation Study funded by ELIXIR. LIPID MAPS® supports researchers to conduct integrative systems-level analyses of lipidomics in physiology and pathophysiology. /system/content_providers/images/000/000/672/original/LM_logo.jpg?1681981489 -
Proteomics Academy
EuPA Educational Committee
The EuPA Educational Committee supports educational initiatives in proteomics. Our aim is to make proteomics techniques affordable to all. We designed this website to provide the scientific community with free and open educational material.
EuBICThe European...
4 training materials0 events (1 past event)Proteomics Academy http://www.proteomics-academy.org/ https://tess.elixir-europe.org/content_providers/proteomics-academy EuPA Educational Committee The EuPA Educational Committee supports educational initiatives in proteomics. Our aim is to make proteomics techniques affordable to all. We designed this website to provide the scientific community with free and open educational material. EuBIC The European Bioinformatics Community (EuBIC) is a EuPA initiative for user-oriented bioinformatics. Our aim is to improve bioinformatics through the set-up of community driven dynamics improving the funding, publication, and work in user-oriented bioinformatics. In order to better disseminate bioinformatics among the scientific community, we also distribute educational material freely through this website, organize teaching, and a yearly conference. We function on a spontaneous voluntary basis, anyone is free to join, just contact us to stay tuned on the latest events! The Proteomics Academy is a joint effort of the European Proteomics Association (EuPA) educational committee and the European Bioinformatics Community (EuBIC) initiative. Our aim is to foster interaction between scientists interested in proteomics in an open, constructive, and collaborative way. We will be happy to answer your questions, receive your suggestions, and we welcome anyone wanting to join this community effort! /system/content_providers/images/000/000/064/original/97d05c_c3fb133973c34e318b81d122091dd238.png?1484056294 -
COG-Train
COG-Train is an international educational initiative providing open-access learning in SARS-CoV-2 genomics. It aims to facilitate an increase in global genome sequencing and analysis capacity, reduce sequencing inequality and enhance pathogen surveillance.
The programme’s training courses and...
4 training materialsCOG-Train https://www.cogconsortium.uk/priority-areas/training/ https://tess.elixir-europe.org/content_providers/cog-train COG-Train is an international educational initiative providing open-access learning in SARS-CoV-2 genomics. It aims to facilitate an increase in global genome sequencing and analysis capacity, reduce sequencing inequality and enhance pathogen surveillance. The programme’s training courses and development are built around our core concept of partnering with international researchers, public health experts and surveillance networks and providing open-access FREE training for all. COG-Train is funded by Wellcome Trust and the Foreign, Commonwealth & Development Office and led jointly by COVID-19 Genomics UK (COG-UK) consortium and Wellcome Connecting Science (WCS). Whole Viral Genome sequencing is an essential tool to identify and track the emergence and spread of SARS-CoV-2 variants as the COVID-19 pandemic progresses. Sequence data informs public health interventions and the further development of diagnostics, therapeutics and vaccines. There is inequity of access to pathogen sequencing worldwide, and COG-Train is committed to contributing towards efforts that close this gap. By building global partnerships with sequencing networks and scientists around the world, we hope to build a truly inclusive training programme that shares the many challenges faced in sequencing efforts, as well as highlighting the numerous success stories, and facilitating knowledge sharing. Outputs include a series of massive online, open-access courses on all aspects of SARS-CoV-2 sequencing based on WCS’s successful use of the FutureLearn platform, as well as week-long intensive virtual training courses, short expert workshops and concurrent distributed Classrooms, the latter of which utilises blended training. The distributed classroom model will be used to increase reach and impact of the learning materials, with training being delivered simultaneously in multiple classrooms across many countries. The training programme includes train-the-trainer components to help further build capacity in-country, rather than rely on a one-hit train and leave model. The COG-Train educational programme builds on the COG-UK values of data sharing, open collaboration, value for money, inclusivity and the prioritisation of public health impact. /system/content_providers/images/000/000/644/original/COG-Train_Logo.png?1657104279