6 training materials found
RDMbites | FASTQ format

In this RDMbite you will learn about the data stored within FASTQ files

Keywords: FASTQ, Data storage

Resource type: Video

RDMbites | FASTQ files in colorspace

FASTQ files derived from colorspace sequencing.

Keywords: FastQ, Data sharing

Resource type: Video

RDMbites | RNAseq expression data

In this RDMbite you will learn about common units for gene, or transcript, expression, including some which you could argue could be retired but are still very common in databases and publications. We’ll discuss the drawbacks of some metrics, and make the case for using TPMs as standard.

Keywords: RNAseq, data

Resource type: Video

RDMbites | Sequencing Data QC: causes and consequences

Learning the importance of performing quality control on high-throughput sequencing data.

Keywords: Sequencing, FastQC, QC, data

Resource type: Video

RDMbites | Sequencing Data QC: FastQC metrics

Sequencing data quality control metrics generated by the widely used program FastQC.

Keywords: Sequencing, data, FastQC

Resource type: Video

RDMbites | Sequencing data QC: trimming

Sequencing data QC, trimming raw sequencing reads

Keywords: sequencing data, FastQC

Resource type: Video

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