Target audience: life scientists
Best practices for writing reproducible data-analysis
Creating a reproducible and re-usable data-analysis environment with Rstudio
Input: https://github.com/vibbits/RDM-LS
Output: https://github.com/vibbits/RDM-LS-solution
Scientific topics: Data management, Data architecture, analysis and design
Keywords: Data analysis
Resource type: Presentation
- Data security
- Encryption
- Passwords
Scientific topics: Data management, Data security
Keywords: data encryption
Resource type: Presentation
Valorisation and IP
- Basics of Tech Transfer and IPR from an academic perspective
- Insights as to:
- Why is it important when handling and managing research data?
- How do IP rights fit in FAIR data principles
- When to safeguard data for proprietary protection?
- Where/how...
Scientific topics: Data management
Keywords: intellectual property protection
Resource type: Presentation
- why preserve data
- what data should be preserved
- how share data
- where to deposit your data
- Fairsharing, re3data
- ELIXIR Core Resources
- Data Formats
- Generic archives
Scientific topics: Data management, Data submission, annotation, and curation
Keywords: data formats, ELIXIR Core resources, FAIR data submission
Resource type: Presentation
- how to find existing data (OmicsDI, pubmed, BioStudies, Google Data search, Data Management Hub)
- licenses
- datasets as first-class research products
- research software as first-class research products
- data citations
Scientific topics: Data management
Keywords: data licenses, software licenses, data journal
Resource type: Presentation
“Documentation is a love letter that you write to your future self.”
Damian Conway (2005)
Make your data as useful as possible for “your future self” and others
Never forget what you did or how or why you did it
Always find beck your precious data (easily)
Make data understandable,...
Scientific topics: Data management
Keywords: data documentation, metadata
Resource type: Presentation
dmponline.be - creating data management plans
why, what to cover, examples and self-assessment grids
Keywords: Data management planning
Resource type: Presentation
- The basics
- Planning your research from a GDPR point of view
- From planning to collecting your data
- Structuring and analyzing your data
- Sharing, publishing, archiving and destroying your data
Scientific topics: Data management
Keywords: GDPR
Resource type: Presentation
Paula Oset - Research funders and journal policies
Scientific topics: Data management
Keywords: journal policies, research funding
Resource type: Presentation
RESEARCH DATA MANAGEMENT IN LIFE SCIENCES
Introduction to RDM & data lifecycle
Thomas Van de Velde (Data steward team Ghent University)
Keywords: research data, data management
Resource type: Presentation
This is an online tutorial where you can learn how to write tool wrappers and workflows using the Common Workflow Language (CWL). The materials provided here describe the first stable version of the CWL - Version 1.0. The tutorial is hosted on the [ELIXIR-SI eLearning...
Scientific topics: Workflows
Keywords: commonwl, common workflow language, CWL, Workflows, eLearning, EeLP
Resource type: Installation instructions, Manual
This is an online tutorial where you can learn how to install the Beacon application and "light a beacon" (i.e. deploy the Beacon application) on your data.
The tutorial is hosted on the ELIXIR-SI eLearning Platform (EeLP). The main part of the tutorial are learning materials with...
Scientific topics: Genomics
Keywords: genomics, open access, eLearning, EeLP
Resource type: Video, Manual, Slides, Installation instructions
Materials from the ELIXIR workshop “Galaxy Proteomics workshop Prague 2018”, Oct 4-5 2018 at the IOCB, Prague, Czech Republic
Scientific topics: Proteomics
Keywords: Galaxy, training, proteomics, eLearning, EeLP
Resource type: course materials, Training materials, Slides
Materials from the ELIXIR workshop “ELIXIR TtR course: Basic genomics using advanced analysis tools”, Nov 5-6 2018 at the University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia
Scientific topics: Genomics
Keywords: Galaxy, training, Genomics, eLearning, EeLP
Resource type: course materials, Training materials, Slides
The Ontology Lookup Service (OLS) provides access to over 150 public biomedical ontologies. You can use OLS to search and visualise ontologies, and an API is also provided for programmatic access. Ontologies provide standard terminology for describing data that help us integrate and analyse data....
Scientific topics: Ontology and terminology
Resource type: Webinar
Claire O'Donovan, leader of the Protein Function Content team at EMBL-EBI, gives an introduction into biocuration and talks about what it is like to work as a biocurator and the skill sets you need.
This webinar was recorded on 2 March 2016 and is best viewed using Google Chrome and in...
Keywords: Biocuration
