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83 materials found

Target audience: Graduate students 


Infectious Disease Genomic Epidemiology 2018 Module 7-Data Visualization

Course providing an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools.

Infectious Disease Genomic Epidemiology 2018 Module 7-Data Visualization https://tess.elixir-europe.org/materials/infectious-disease-genomic-epidemiology-2018-module-7-data-visualization Course providing an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Infectious Disease Genomic Epidemiology 2018 Module 6-Emerging Pathogen Detection and Identification Using Metagenomics Samples

Course providing an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools.

Infectious Disease Genomic Epidemiology 2018 Module 6-Emerging Pathogen Detection and Identification Using Metagenomics Samples https://tess.elixir-europe.org/materials/infectious-disease-genomic-epidemiology-2018-module-6-emerging-pathogen-detection-and-identification-using-metagenomics-samples Course providing an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Infectious Disease Genomic Epidemiology 2018 Module 5-Phylogeographic Analysis

Course providing an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools.

Infectious Disease Genomic Epidemiology 2018 Module 5-Phylogeographic Analysis https://tess.elixir-europe.org/materials/infectious-disease-genomic-epidemiology-2018-module-5-phylogeographic-analysis Course providing an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools. Researchers Graduate students Biologists, Genomicists, Computer Scientists Post-Doctoral Fellows
Infectious Disease Genomic Epidemiology 2018 Module 4-Antimicrobial Resistance Genes

Course providing an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools.

Infectious Disease Genomic Epidemiology 2018 Module 4-Antimicrobial Resistance Genes https://tess.elixir-europe.org/materials/infectious-disease-genomic-epidemiology-2018-module-4-antimicrobial-resistance-genes Course providing an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Infectious Disease Genomic Epidemiology 2018 Module 2-Pathogen Genomic Analysis 1

Course providing an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools.

Infectious Disease Genomic Epidemiology 2018 Module 2-Pathogen Genomic Analysis 1 https://tess.elixir-europe.org/materials/infectious-disease-genomic-epidemiology-2018-module-2-pathogen-genomic-analysis-1 Course providing an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Infectious Disease Genomic Epidemiology 2018 Module 1-Introduction to Public Health Microbiology and Genomic Epidemiology

Course providing an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools.

Infectious Disease Genomic Epidemiology 2018 Module 1-Introduction to Public Health Microbiology and Genomic Epidemiology https://tess.elixir-europe.org/materials/infectious-disease-genomic-epidemiology-2018-module-1-introduction-to-public-health-microbiology-and-genomic-epidemiology Course providing an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Pathways and Network Analysis of -Omics data 2018 Module 6-Regulatory Network Analysis

Course covers the bioinformatics concepts and tools available for interpreting a gene list using pathway and network information.

Pathways and Network Analysis of -Omics data 2018 Module 6-Regulatory Network Analysis https://tess.elixir-europe.org/materials/pathways-and-network-analysis-of-omics-data-2018-module-6-regulatory-network-analysis Course covers the bioinformatics concepts and tools available for interpreting a gene list using pathway and network information. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Pathways and Network Analysis of -Omics data 2018 Module 5-Gene Function Prediction

Course covers the bioinformatics concepts and tools available for interpreting a gene list using pathway and network information.

Pathways and Network Analysis of -Omics data 2018 Module 5-Gene Function Prediction https://tess.elixir-europe.org/materials/pathways-and-network-analysis-of-omics-data-2018-module-5-gene-function-prediction Course covers the bioinformatics concepts and tools available for interpreting a gene list using pathway and network information. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Pathways and Network Analysis of -Omics data 2018 Module 3-Network Visualization and Analysis with Cytoscape

Course covers the bioinformatics concepts and tools available for interpreting a gene list using pathway and network information.

Pathways and Network Analysis of -Omics data 2018 Module 3-Network Visualization and Analysis with Cytoscape https://tess.elixir-europe.org/materials/pathways-and-network-analysis-of-omics-data-2018-module-3-network-visualization-and-analysis-with-cytoscape Course covers the bioinformatics concepts and tools available for interpreting a gene list using pathway and network information. Researchers Graduate students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists
Pathways and Network Analysis of -Omics Data 2018 Module 2-Finding Over-Represented Pathways

Course covers the bioinformatics concepts and tools available for interpreting a gene list using pathway and network information.

Pathways and Network Analysis of -Omics Data 2018 Module 2-Finding Over-Represented Pathways https://tess.elixir-europe.org/materials/pathways-and-network-analysis-of-omics-data-2018-module-2-finding-over-represented-pathways Course covers the bioinformatics concepts and tools available for interpreting a gene list using pathway and network information. Researchers Graduate students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists
Epigenomic Data Analysis 2018 Module 2-ChIP-Seq Alignment, Peak Calling, and Visualization

Course providing an introduction to histone ChiP-Seq and WGBS data analysis followed by integrated tutorials demonstrating the use of open source ChiP-Seq and WGBS analysis packages.

Epigenomic Data Analysis 2018 Module 2-ChIP-Seq Alignment, Peak Calling, and Visualization https://tess.elixir-europe.org/materials/epigenomic-data-analysis-2018-module-2-chip-seq-alignment-peak-calling-and-visualization Course providing an introduction to histone ChiP-Seq and WGBS data analysis followed by integrated tutorials demonstrating the use of open source ChiP-Seq and WGBS analysis packages. Researchers Graduate students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists
Bioinformatics of Genomic Medicine 2018 Module 7-Identifying Integrative Subtypes and Building Classifiers

Course will explore various aspects of genomic medicine, covering and teaching popular tools and methods in the field.

Bioinformatics of Genomic Medicine 2018 Module 7-Identifying Integrative Subtypes and Building Classifiers https://tess.elixir-europe.org/materials/bioinformatics-of-genomic-medicine-2018-module-7-identifying-integrative-subtypes-and-building-classifiers Course will explore various aspects of genomic medicine, covering and teaching popular tools and methods in the field. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Bioinformatics of Genomic Medicine 2018 Module 5-Available Epigenetics Data and Resources

Course will explore various aspects of genomic medicine, covering and teaching popular tools and methods in the field.

Bioinformatics of Genomic Medicine 2018 Module 5-Available Epigenetics Data and Resources https://tess.elixir-europe.org/materials/bioinformatics-of-genomic-medicine-2018-module-5-available-epigenetics-data-and-resources Course will explore various aspects of genomic medicine, covering and teaching popular tools and methods in the field. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Bioinformatics of Genomic Medicine 2018 Module 4-Translating Research Workflows into Clinical Tests

Course will explore various aspects of genomic medicine, covering and teaching popular tools and methods in the field.

Bioinformatics of Genomic Medicine 2018 Module 4-Translating Research Workflows into Clinical Tests https://tess.elixir-europe.org/materials/bioinformatic-of-genomic-medicine-2018-module-4-translating-research-workflows-into-clinical-tests Course will explore various aspects of genomic medicine, covering and teaching popular tools and methods in the field. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Bioinformatics of Genomic Medicine 2018 Module 2-Introduction to Tools, Computing Infrastructure, and Data

Course will explore various aspects of genomic medicine, covering and teaching popular tools and methods in the field.

Bioinformatics of Genomic Medicine 2018 Module 2-Introduction to Tools, Computing Infrastructure, and Data https://tess.elixir-europe.org/materials/bioinformatics-of-genomic-medicine-2018-module-2-introduction-to-tools-computing-infrastructure-and-data Course will explore various aspects of genomic medicine, covering and teaching popular tools and methods in the field. Researchers Graduate students Biologists, Genomicists, Computer Scientists Post-Doctoral Fellows
Informatics and Statistics for Metabolomics 2018 Module 6-Future of Metabolomics

Course covers many topics ranging from understanding metabolomics technologies, data collection and analysis, using pathway databases, performing pathway analysis, conducting univariate and multivariate statistics, working with metabolomics databases, and exploring chemical databases.

Informatics and Statistics for Metabolomics 2018 Module 6-Future of Metabolomics https://tess.elixir-europe.org/materials/informatics-and-statistics-for-metabolomics-2018-module-6-future-of-metabolomics Course covers many topics ranging from understanding metabolomics technologies, data collection and analysis, using pathway databases, performing pathway analysis, conducting univariate and multivariate statistics, working with metabolomics databases, and exploring chemical databases. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Informatics and Statistics for Metabolomics 2018 Module 2-Metabolite Identification and Annotation

Course covers many topics ranging from understanding metabolomics technologies, data collection and analysis, using pathway databases, performing pathway analysis, conducting univariate and multivariate statistics, working with metabolomics databases, and exploring chemical databases.

Informatics and Statistics for Metabolomics 2018 Module 2-Metabolite Identification and Annotation https://tess.elixir-europe.org/materials/informatics-and-statistics-for-metabolomics-2018-module-2-metabolite-identification-and-annotation Course covers many topics ranging from understanding metabolomics technologies, data collection and analysis, using pathway databases, performing pathway analysis, conducting univariate and multivariate statistics, working with metabolomics databases, and exploring chemical databases. Researchers Graduate students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists
Analysis of Metagenomic Data 2018 Module 5-Pulling Genomes from Metagenomes

Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools.

Analysis of Metagenomic Data 2018 Module 5-Pulling Genomes from Metagenomes https://tess.elixir-europe.org/materials/analysis-of-metagenomic-data-2018-module-5-pulling-genomes-from-metagenomes Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Analysis of Metagenomic Data 2018 Module 4-Metagenomic Taxonomic and Functional Composition

Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools.

Analysis of Metagenomic Data 2018 Module 4-Metagenomic Taxonomic and Functional Composition https://tess.elixir-europe.org/materials/analysis-of-metagenomic-data-2018-module-4-metagenomic-taxonomic-and-functional-composition Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Analysis of Metagenomic Data 2018 Module 3-PICRUSt

Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools.

Analysis of Metagenomic Data 2018 Module 3-PICRUSt https://tess.elixir-europe.org/materials/analysis-of-metagenomic-data-2018-module-3-picrust Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Analysis of Metagenomic Data 2018 Module 2-Marker Gene-Based Analysis

Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools.

Analysis of Metagenomic Data 2018 Module 2-Marker Gene-Based Analysis https://tess.elixir-europe.org/materials/analysis-of-metagenomic-data-2018-module-2-marker-gene-based-analysis Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools. Researchers Graduate students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists
Informatics for RNA-Seq Analysis 2018 Module 5-Genome Guided and Genome-free Transcriptome Assembly

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2018 Module 5-Genome Guided and Genome-free Transcriptome Assembly https://tess.elixir-europe.org/materials/informatics-for-rna-seq-analysis-2018-module-5-genome-guided-and-genome-free-transcriptome-assembly Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate students
Informatics for RNA-Seq Analysis 2018 Module 1-Introduction to RNA Sequencing Analysis

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2018 Module 1-Introduction to RNA Sequencing Analysis https://tess.elixir-europe.org/materials/informatics-for-rna-seq-analysis-2018-module-1-introduction-to-rna-sequencing-analysis Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages. Researchers Biologists, Genomicists, Computer Scientists Graduate students Post-Doctoral Fellows
Informatics on High-Throughput Sequencing Data 2018 Module 6-De Novo Assmebly

Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads.

Informatics on High-Throughput Sequencing Data 2018 Module 6-De Novo Assmebly https://tess.elixir-europe.org/materials/informatics-on-high-throughput-sequencing-data-2018-module-6-de-novo-assmebly Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate students
Informatics on High-Throughput Sequencing Data 2018 Module 5-Structural Variant Calling

Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads.

Informatics on High-Throughput Sequencing Data 2018 Module 5-Structural Variant Calling https://tess.elixir-europe.org/materials/informatics-on-high-throughput-sequencing-data-2018-module-5-structural-variant-calling Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads. Researchers Graduate students Biologists, Genomicists, Computer Scientists Post-Doctoral Fellows
Informatics on High-Throughput Sequencing Data 2018 Module 4-Small-Variant Calling and Annotation

Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads.

Informatics on High-Throughput Sequencing Data 2018 Module 4-Small-Variant Calling and Annotation https://tess.elixir-europe.org/materials/informatics-on-high-throughput-sequencing-data-2018-module-4-small-variant-calling-and-annotation Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate students
Informatics on High-Throughput Sequencing Data 2018 Module 3-Genome Alignment

Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads.

Informatics on High-Throughput Sequencing Data 2018 Module 3-Genome Alignment https://tess.elixir-europe.org/materials/informatics-on-high-throughput-sequencing-data-2018-module-3-genome-alignment Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads. Graduate students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Researchers
Informatics on High-Throughput Sequencing Data 2018 Module 2-Data Visualization

Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads.

Informatics on High-Throughput Sequencing Data 2018 Module 2-Data Visualization https://tess.elixir-europe.org/materials/informatics-on-high-throughput-sequencing-data-2018-module-2-data-visualization Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads. Researchers Graduate students Biologists, Genomicists, Computer Scientists Post-Doctoral Fellows
Informatics on High-Throughput Sequencing Data 2018 Module 1-Introduction to High-Throughput Sequencing

Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads.

Informatics on High-Throughput Sequencing Data 2018 Module 1-Introduction to High-Throughput Sequencing https://tess.elixir-europe.org/materials/informatics-on-high-throughput-sequencing-data-2018-module-1-introduction-to-high-throughput-sequencing Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads. Researchers Graduate students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists
Exploratory Analysis of Biological Data using R 2018

Course covered for this workshop are broadly relevant for many areas of modern, quantitative biology such as flow cytometry, expression profile analysis, function prediction and more.

Exploratory Analysis of Biological Data using R 2018 https://tess.elixir-europe.org/materials/exploratory-analysis-of-biological-data-using-r-2018 Course covered for this workshop are broadly relevant for many areas of modern, quantitative biology such as flow cytometry, expression profile analysis, function prediction and more. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate students