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Standard database or policy: IntAct molecular interactio...  or BpForms Grammar 


BpForms tutorial

BpForms is a toolkit for unambiguously describing the molecular structure (atoms and bonds) of DNA, RNA, and proteins, including non-canonical monomeric forms (subunits which compose polymers), crosslinks, nicks, and circular topologies. By concretely describing the molecular structure of...

Scientific topics: Systems biology, Protein modifications, Proteomics, Transcriptomics, Epigenomics

Operations: Validation

Keywords: RNA modification, protein modification, DNA repair, DNA damage, crosslink, nick

Resource type: Jupyter notebook

BpForms tutorial https://tess.elixir-europe.org/materials/bpforms-tutorial BpForms is a toolkit for unambiguously describing the molecular structure (atoms and bonds) of DNA, RNA, and proteins, including non-canonical monomeric forms (subunits which compose polymers), crosslinks, nicks, and circular topologies. By concretely describing the molecular structure of biopolymers, BpForms aims to help epigenomics, transcriptomics, proteomics, systems biology, and synthetic biology researchers share and integrate information about DNA modification, post-transcriptional modification, post-translational modification, expanded genetic codes, and synthetic parts. This tutorial provides an introduction to BpForms. Systems biology Protein modifications Proteomics Transcriptomics Epigenomics RNA modification, protein modification, DNA repair, DNA damage, crosslink, nick genomics researchers computational biologists bioinformaticians systems biologists
IntAct: The molecular interactions database at EMBL-EBI: webinar

IntAct: The molecular interactions database at EMBL-EBI: webinar from http://www.ebi.ac.uk/training/online/course/intact-molecular-interactions-database-embl-ebi-we.

Keywords: Systems, Proteins

IntAct: The molecular interactions database at EMBL-EBI: webinar https://tess.elixir-europe.org/materials/intact-the-molecular-interactions-database-at-embl-ebi-webinar IntAct: The molecular interactions database at EMBL-EBI: webinar from http://www.ebi.ac.uk/training/online/course/intact-molecular-interactions-database-embl-ebi-we. Systems, Proteins 2016-06-14
IntAct: Quick tour

IntAct: Quick tour from http://www.ebi.ac.uk/training/online/course/intact-quick-tour.

Keywords: Systems, Proteins

IntAct: Quick tour https://tess.elixir-europe.org/materials/intact-quick-tour IntAct: Quick tour from http://www.ebi.ac.uk/training/online/course/intact-quick-tour. Systems, Proteins 2016-06-14
IntAct: Molecular interactions at EMBL-EBI

IntAct: Molecular interactions at EMBL-EBI from http://www.ebi.ac.uk/training/online/course/intact-molecular-interactions-ebi.

Keywords: Systems, Proteins

IntAct: Molecular interactions at EMBL-EBI https://tess.elixir-europe.org/materials/intact-molecular-interactions-at-embl-ebi IntAct: Molecular interactions at EMBL-EBI from http://www.ebi.ac.uk/training/online/course/intact-molecular-interactions-ebi. Systems, Proteins 2016-06-14