Register training material
7 materials found

Scientific topics: Functional genomics 


ArrayExpress in BioStudies

ArrayExpress is a collection in the BioStudies database for functional genomics data. This quick tour will walk you through how datasets are stored in ArrayExpress and will teach you how to effectively search for and retrieve data.

Scientific topics: Functional genomics, Genomics

Resource type: e-learning

Functional genomics

This course will introduce the field of functional genomics and provide an overview of the different resources at the EBI which are related to this field.

Scientific topics: Functional genomics, Gene expression

Keywords: Microarray, High-throughput sequencing

Resource type: e-learning

Functional genomics III

In this online course, we will look at why, when, where to submit your functional genomics data. 

Scientific topics: Functional genomics

Keywords: Metadata, Functional genomics resources, Data submission, Microarray, Next-generation sequencing, NGS

Resource type: e-learning

Functional genomics II

This online course introduces common technologies in functional genomics studies, including microarrays and next generation sequencing (NGS), with a special focus on RNA-sequencing (RNA-seq). We look at important considerations when designing your experiments, data analysis methods, and discuss...

Scientific topics: Functional genomics, Gene expression, Genotype and phenotype, Microarray experiment, RNA-Seq

Keywords: Next-generation sequencing, NGS, Real-time PCR, Microarray, Epigenetic modifications, Histone modifications, DNA-protein interaction, RNA-protein interaction

Resource type: e-learning

Functional genomics I

This online course will give you an introduction to functional genomics. We will introduce you to different types of functional genomics studies and discuss best practices when designing your own experiments. We will also explore some examples of how functional genomics is being applied to drug...

Scientific topics: Functional genomics, Gene expression, Genomics

Keywords: Introduction, Gramene database, Designing functional genomics experiments

Resource type: e-learning

PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics

PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics. It allows querying and visualising structural and functional annotations, gene families, protein domains, phylogenetic trees, and genome organization. PLAZA 4.0 is the latest iteration of the PLAZA...

Scientific topics: Genotype and phenotype, Phylogenomics, Evolutionary biology, Comparative genomics, Functional genomics, Plant biology

Operations: Comparison, Visualisation, Annotation

Keywords: plants, Plants bioinformatics, genomics, Visualisation, Annotation

Resource type: Training materials

ArrayExpress: Quick tour

This quick tour provides an overview of EMBL-EBI’s functional genomics database ArrayExpress.

This course was updated in December 2015.

An undergraduate-level understanding of biology is an advantage. You may wish to have a look at our Functional genomics: An introduction to EMBL-EBI...

Scientific topics: Functional genomics, Gene expression and microarray, Gene expression

Keywords: Gene Expression