Scientific topics: Functional genomics
ArrayExpress is a collection in the BioStudies database for functional genomics data. This quick tour will walk you through how datasets are stored in ArrayExpress and will teach you how to effectively search for and retrieve data.
This online course introduces common technologies in functional genomics studies, including microarrays and next generation sequencing (NGS), with a special focus on RNA-sequencing (RNA-seq). We look at important considerations when designing your experiments, data analysis methods, and discuss...
Scientific topics: Functional genomics, Gene expression, Genotype and phenotype, Microarray experiment, RNA-Seq
Keywords: Next-generation sequencing, NGS, Real-time PCR, Microarray, Epigenetic modifications, Histone modifications, DNA-protein interaction, RNA-protein interaction
Resource type: e-learning
This online course will give you an introduction to functional genomics. We will introduce you to different types of functional genomics studies and discuss best practices when designing your own experiments. We will also explore some examples of how functional genomics is being applied to drug...
PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics. It allows querying and visualising structural and functional annotations, gene families, protein domains, phylogenetic trees, and genome organization. PLAZA 4.0 is the latest iteration of the PLAZA...
Scientific topics: Genotype and phenotype, Phylogenomics, Evolutionary biology, Comparative genomics, Functional genomics, Plant biology
Operations: Comparison, Visualisation, Annotation
Keywords: plants, Plants bioinformatics, genomics, Visualisation, Annotation
Resource type: Training materials
This quick tour provides an overview of EMBL-EBI’s functional genomics database ArrayExpress.
This course was updated in December 2015.
An undergraduate-level understanding of biology is an advantage. You may wish to have a look at our Functional genomics: An introduction to EMBL-EBI...