Register training material
161 materials found

Resource type: Video 


Parameter Scanning and Sampling in COPASI

A video tutorial for the simulation software COPASI, showing how to create sequences of simulations that scan values of various parameters, or that sample those parameters at random.

COPASI logo

Scientific topics: Simulation experiment

Operations: Modelling and simulation, Analysis, Visualisation

Keywords: SystemsBiology, ComputationalBiology, Computational modelling, Kinetic modeling, COPASI

Resource type: Video

Metabolic Control Analysis in COPASI

A tutorial on Metabolic Control Analysis and how to apply it to kinetic models with the software COPASI.

COPASI logo

Scientific topics: Simulation experiment, Systems biology

Operations: Modelling and simulation, Analysis, Visualisation

Keywords: SystemsBiology, ComputationalBiology, Computational modelling, Kinetic modeling, COPASI

Resource type: Video

Steady State Analysis in COPASI

A short tutorial on how to carry out steady state simulations with the software COPASI.

COPASI logo

Scientific topics: Systems biology, Computational biology, Simulation experiment

Operations: Modelling and simulation, Visualisation

Resource type: Video

Time Course Simulation in COPASI

A short tutorial on how to carry out time course simulations based on ODEs with the software COPASI.

COPASI logo

Scientific topics: Simulation experiment

Operations: Modelling and simulation, Visualisation

Keywords: SystemsBiology, ComputationalBiology, Computational modelling, Kinetic modeling, COPASI

Resource type: Video

Model Creation using COPASI

A tutorial on how to create kinetic models with COPASI. Covers the basics of creating models, including definition of new rate laws, etc.

COPASI logo

Scientific topics: Simulation experiment

Operations: Modelling and simulation, Visualisation

Keywords: SystemsBiology, ComputationalBiology, Computational modelling, modeling, Biomodelling, Model, Kinetic modeling, COPASI

Resource type: Video

How to create a concept for the SPHN Dataset

How to create a concept for the SPHN Dataset is a training that was developed in the context of the Swiss Personalized Health Network (SPHN) initiative and is part of a series of trainings centred around the SPHN Interoperability Framework developed by the SPHN Data...

Scientific topics: Computer science, Data management, FAIR data, Medical informatics

Operations: Design, Standardisation and normalisation

Keywords: Clinical data, Semantic Framework, FAIR, Concepts design, Ontology, Semantic inheritance, SNOMED CT, Conceptualization

Resource type: Video, E-Learning

RDMbites | Characters to use and avoid in filenames

In this RDMbite I will show you which special characters to use and which to avoid in file names.
Even though we show examples of how to name files, this information applies to naming directories and folders also.

Keywords: Data management

Resource type: Video

RDMbites | Machine and human readable file naming

In this RDMbite I will show you how to name your files so that they can be read and interpreted by yourself and others.
This includes filenames that are both machine-readable and human-readable, also using punctuation to be able to order and group sets of files.
Although we use examples of how...

Keywords: Data management

Resource type: Video

RDMbites | REDCap: how to run data quality checks

In this video, I will show you how to create and run data quality checks in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to set missing data codes

In this video, I will show you how to set and disable missing data codes in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to add minimum/maximum and date/time formats

In this video, I will show you how to add parameters to your data collection, such as limits on minimum and maximum values, and specific date formats, on REDCap

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to disable selected multiple choice options

In this video, you will learn how to disable specific multiple choice options in REDCap, without deleting and recreating the whole field.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to build a medication table

In this video, I will show you how to build a table to capture data on medication in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to auto-fill dates and time

In this video, I will show you how to set date and time fields to auto-fill during data collection on REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: Introduction

In this video, you are going to learn what REDCap is, how you can get access to it, what it can be used for, and REDCap training resources.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to create a variable with an unknown number of responses

In this video, I will show/demonstrate how to create a question with an unknown number of responses in REDCap

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: How to disable auto-numbering

In this video, I will show you how to disable auto-numbering, edit a patient ID field, or create a secondary ID field on REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to find information for a project audit

In this video, I will show you how to find the necessary information you may need for a project audit in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to download PDFs of your surveys

In this video,I will show you how to download files of your surveys and questionnaires from REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to export your project files

In this video, I’ll show you how to export your project files from REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to build a report

In this video, I will show you how to build a report in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to use the randomization module

In this video, I will show you how to use the randomization module in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to export your data/subsets of data

In this video, I will show you how to export your data/subsets of your data from REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to backup your project

In this video,I will show you how to back-up your project in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to request an API token

In this video, I will show you how to request an API token in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to make changes to your live REDCap project

In this video, I will show you how to make changes to your REDCap project, such as changing existing fields or adding new fields for data collection, while it is live and collecting data.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to archive your project

In this video, I will show you how to archive your project in REDCap, once you have finished data collection.

Keywords: REDCap, clinical, sensitive data

Resource type: Video

RDMbites | What is a Data Steward?

An Introduction to what a Data Steward is

Keywords: Data Steward, Data management

Resource type: Video

RDMbites | Bioimage metadata – REMBI

In this RDMbite we will be speaking about REMBI and its relevance to annotating bioimage metadata

Keywords: REMBI, metadata

Resource type: Video

RDMbites | Bioimage metadata – REMBI: study

In this RDMbite we will be talking about the first aspect of the REMBI metadata guidelines for bioimaging data.

Keywords: REMBI, metadata

Resource type: Video