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Related resources: Chipster
Single cell RNA-seq data analysis using Chipster
This course introduces single cell RNA-seq data analysis. It covers the processing of transcript counts from quality control and filtering to dimensional reduction, clustering, and differential expression analysis. You will also learn how to do integrated analysis of two samples. We use Seurat v3...
Keywords: scRNA-seq
Resource type: Slides, Training materials
Single cell RNA-seq data analysis using Chipster
https://www.csc.fi/web/training/-/single-cell-chipster-2019
https://tess.elixir-europe.org/materials/single-cell-rna-seq-data-analysis-using-chipster
This course introduces single cell RNA-seq data analysis. It covers the processing of transcript counts from quality control and filtering to dimensional reduction, clustering, and differential expression analysis. You will also learn how to do integrated analysis of two samples. We use Seurat v3 tools embedded in the user-friendly Chipster software.
Eija Korpelainen
Maria Lehtivaara
scRNA-seq
Biologists
bioinformaticians