1195 materials found

Informatics and Statistics for Metabolomics 2018 Module 3-Databases for Chemical, Spectral, and Biological Data

Course covers many topics ranging from understanding metabolomics technologies, data collection and analysis, using pathway databases, performing pathway analysis, conducting univariate and multivariate statistics, working with metabolomics databases, and exploring chemical databases.

Informatics and Statistics for Metabolomics 2018 Module 3-Databases for Chemical, Spectral, and Biological Data https://tess.elixir-europe.org/materials/informatics-and-statistics-for-metabolomics-2018-module-3-databases-for-chemical-spectral-and-biological-data Course covers many topics ranging from understanding metabolomics technologies, data collection and analysis, using pathway databases, performing pathway analysis, conducting univariate and multivariate statistics, working with metabolomics databases, and exploring chemical databases. Researchers Post-Doctoral Fellows Graduate Students Biologists, Genomicists, Computer Scientists
Informatics and Statistics for Metabolomics 2018 Module 2-Metabolite Identification and Annotation

Course covers many topics ranging from understanding metabolomics technologies, data collection and analysis, using pathway databases, performing pathway analysis, conducting univariate and multivariate statistics, working with metabolomics databases, and exploring chemical databases.

Informatics and Statistics for Metabolomics 2018 Module 2-Metabolite Identification and Annotation https://tess.elixir-europe.org/materials/informatics-and-statistics-for-metabolomics-2018-module-2-metabolite-identification-and-annotation Course covers many topics ranging from understanding metabolomics technologies, data collection and analysis, using pathway databases, performing pathway analysis, conducting univariate and multivariate statistics, working with metabolomics databases, and exploring chemical databases. Researchers Graduate students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists
Informatics and Statistics for Metabolomics 2018 Module 1-Introduction to Metabolomics

Course covers many topics ranging from understanding metabolomics technologies, data collection and analysis, using pathway databases, performing pathway analysis, conducting univariate and multivariate statistics, working with metabolomics databases, and exploring chemical databases.

Informatics and Statistics for Metabolomics 2018 Module 1-Introduction to Metabolomics https://tess.elixir-europe.org/materials/informatics-and-statistics-for-metabolomics-2018-module-1-introduction-to-metabolomics Course covers many topics ranging from understanding metabolomics technologies, data collection and analysis, using pathway databases, performing pathway analysis, conducting univariate and multivariate statistics, working with metabolomics databases, and exploring chemical databases. Researchers Graduate Students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists
InterMine user tutorial

A tutorial for end users of InterMine

Keywords: Data querying, Data analysis, Data download, FAIR

Resource type: Tutorial

InterMine user tutorial https://tess.elixir-europe.org/materials/intermine-user-tutorial A tutorial for end users of InterMine Data querying, Data analysis, Data download, FAIR Life Science Researchers Bioinformaticians
InterMine user manual

Documentation for end users on how to search for data, run simple and complex queries, analyse results and download data from any instance of InterMine.

Keywords: Data querying, data visualization, Data download, FAIR

Resource type: Documentation

InterMine user manual https://tess.elixir-europe.org/materials/intermine-user-manual Documentation for end users on how to search for data, run simple and complex queries, analyse results and download data from any instance of InterMine. Data querying, data visualization, Data download, FAIR Life Science Researchers Bioinformaticians
InterMine operator manual

Documentation on how to install, configure and operate an InterMine instance.

Keywords: Data integration, Data analysis, Data publishing, FAIR

Resource type: Documentation

InterMine operator manual https://tess.elixir-europe.org/materials/intermine-operator-manual Documentation on how to install, configure and operate an InterMine instance. Data integration, Data analysis, Data publishing, FAIR Bioinformaticians software engineers
Analysis of Metagenomic Data 2018 Module 8-Biomarkers and Bringing it all Together

Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools.

Analysis of Metagenomic Data 2018 Module 8-Biomarkers and Bringing it all Together https://tess.elixir-europe.org/materials/analysis-of-metagenomic-data-2018-module-8-biomarkers-and-bringing-it-all-together Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools. Researchers Post-Doctoral Fellows Graduate Students Biologists, Genomicists, Computer Scientists
Analysis of Metagenomic Data 2018 Module 7-Statistical Tests for Metagenomics

Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools.

Analysis of Metagenomic Data 2018 Module 7-Statistical Tests for Metagenomics https://tess.elixir-europe.org/materials/analysis-of-metagenomic-data-2018-module-7-statistical-tests-for-metagenomics Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools. Researchers Post-Doctoral Fellows Graduate Students Biologists, Genomicists, Computer Scientists
Analysis of Metagenomic Data 2018 Module 6-Metatranscriptomics

Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools.

Analysis of Metagenomic Data 2018 Module 6-Metatranscriptomics https://tess.elixir-europe.org/materials/analysis-of-metagenomic-data-2018-module-6-metatranscriptomics Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools. Researchers Biologists, Genomicists, Computer Scientists Graduate Students Post-Doctoral Fellows
Analysis of Metagenomic Data 2018 Module 5-Pulling Genomes from Metagenomes

Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools.

Analysis of Metagenomic Data 2018 Module 5-Pulling Genomes from Metagenomes https://tess.elixir-europe.org/materials/analysis-of-metagenomic-data-2018-module-5-pulling-genomes-from-metagenomes Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Analysis of Metagenomic Data 2018 Module 4-Metagenomic Taxonomic and Functional Composition

Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools.

Analysis of Metagenomic Data 2018 Module 4-Metagenomic Taxonomic and Functional Composition https://tess.elixir-europe.org/materials/analysis-of-metagenomic-data-2018-module-4-metagenomic-taxonomic-and-functional-composition Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Analysis of Metagenomic Data 2018 Module 3-PICRUSt

Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools.

Analysis of Metagenomic Data 2018 Module 3-PICRUSt https://tess.elixir-europe.org/materials/analysis-of-metagenomic-data-2018-module-3-picrust Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools. Researchers Post-Doctoral Fellows Graduate students Biologists, Genomicists, Computer Scientists
Analysis of Metagenomic Data 2018 Module 2-Marker Gene-Based Analysis

Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools.

Analysis of Metagenomic Data 2018 Module 2-Marker Gene-Based Analysis https://tess.elixir-europe.org/materials/analysis-of-metagenomic-data-2018-module-2-marker-gene-based-analysis Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools. Researchers Graduate students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists
Analysis of Metagenomic Data 2018 Module 1-Introduction to Metagenomics

Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools.

Analysis of Metagenomic Data 2018 Module 1-Introduction to Metagenomics https://tess.elixir-europe.org/materials/analysis-of-metagenomic-data-2018-module-1-introduction-to-metagenomics Course providing an introduction to metagenomic data analysis followed by hands-on practical tutorials demonstrating the use of metagenome analysis tools. Researchers Graduate Students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists
Informatics for RNA-Seq Analysis 2018 Module 6-Functional Annotation and Analysis of Transcripts

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2018 Module 6-Functional Annotation and Analysis of Transcripts https://tess.elixir-europe.org/materials/informatics-for-rna-seq-analysis-2018-module-6-functional-annotation-and-analysis-of-transcripts Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate Students
Informatics for RNA-Seq Analysis 2018 Module 5-Genome Guided and Genome-free Transcriptome Assembly

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2018 Module 5-Genome Guided and Genome-free Transcriptome Assembly https://tess.elixir-europe.org/materials/informatics-for-rna-seq-analysis-2018-module-5-genome-guided-and-genome-free-transcriptome-assembly Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate students
Informatics for RNA-Seq Analysis 2018 Module 4-Reference Free Alignment

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2018 Module 4-Reference Free Alignment https://tess.elixir-europe.org/materials/informatics-for-rna-seq-analysis-2018-module-4-reference-free-alignment Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate Students
Informatics for RNA-Seq Analysis 2018 Module 3-Expression and Differential Expression

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2018 Module 3-Expression and Differential Expression https://tess.elixir-europe.org/materials/informatics-for-rna-seq-analysis-2018-module-3-expression-and-differential-expression Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages. Researchers Biologists, Genomicists, Computer Scientists Graduate Students Post-Doctoral Fellows
Informatics for RNA-Seq Analysis 2018 Module 2-RNA-Seq Alignment and Visualization

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2018 Module 2-RNA-Seq Alignment and Visualization https://tess.elixir-europe.org/materials/informatics-for-rna-seq-analysis-2018-module-2-rna-seq-alignment-and-visualization Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages. Researchers Post-Doctoral Fellows Graduate Students Biologists, Genomicists, Computer Scientists
Informatics for RNA-Seq Analysis 2018 Module 1-Introduction to RNA Sequencing Analysis

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2018 Module 1-Introduction to RNA Sequencing Analysis https://tess.elixir-europe.org/materials/informatics-for-rna-seq-analysis-2018-module-1-introduction-to-rna-sequencing-analysis Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages. Researchers Biologists, Genomicists, Computer Scientists Graduate students Post-Doctoral Fellows
Informatics on High-Throughput Sequencing Data 2018 Module 6-De Novo Assmebly

Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads.

Informatics on High-Throughput Sequencing Data 2018 Module 6-De Novo Assmebly https://tess.elixir-europe.org/materials/informatics-on-high-throughput-sequencing-data-2018-module-6-de-novo-assmebly Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate students
Informatics on High-Throughput Sequencing Data 2018 Module 5-Structural Variant Calling

Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads.

Informatics on High-Throughput Sequencing Data 2018 Module 5-Structural Variant Calling https://tess.elixir-europe.org/materials/informatics-on-high-throughput-sequencing-data-2018-module-5-structural-variant-calling Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads. Researchers Graduate students Biologists, Genomicists, Computer Scientists Post-Doctoral Fellows
Informatics on High-Throughput Sequencing Data 2018 Module 4-Small-Variant Calling and Annotation

Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads.

Informatics on High-Throughput Sequencing Data 2018 Module 4-Small-Variant Calling and Annotation https://tess.elixir-europe.org/materials/informatics-on-high-throughput-sequencing-data-2018-module-4-small-variant-calling-and-annotation Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate students
Informatics on High-Throughput Sequencing Data 2018 Module 3-Genome Alignment

Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads.

Informatics on High-Throughput Sequencing Data 2018 Module 3-Genome Alignment https://tess.elixir-europe.org/materials/informatics-on-high-throughput-sequencing-data-2018-module-3-genome-alignment Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads. Graduate students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Researchers
Informatics on High-Throughput Sequencing Data 2018 Module 2-Data Visualization

Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads.

Informatics on High-Throughput Sequencing Data 2018 Module 2-Data Visualization https://tess.elixir-europe.org/materials/informatics-on-high-throughput-sequencing-data-2018-module-2-data-visualization Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads. Researchers Graduate students Biologists, Genomicists, Computer Scientists Post-Doctoral Fellows
Informatics on High-Throughput Sequencing Data 2018 Module 1-Introduction to High-Throughput Sequencing

Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads.

Informatics on High-Throughput Sequencing Data 2018 Module 1-Introduction to High-Throughput Sequencing https://tess.elixir-europe.org/materials/informatics-on-high-throughput-sequencing-data-2018-module-1-introduction-to-high-throughput-sequencing Course covers the bioinformatics tools available for managing and interpreting high-throughput sequencing data, where the focus is on Illumina reads although information is applicable to all sequencer reads. Researchers Graduate students Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists
Exploratory Analysis of Biological Data using R 2018

Course covered for this workshop are broadly relevant for many areas of modern, quantitative biology such as flow cytometry, expression profile analysis, function prediction and more.

Exploratory Analysis of Biological Data using R 2018 https://tess.elixir-europe.org/materials/exploratory-analysis-of-biological-data-using-r-2018 Course covered for this workshop are broadly relevant for many areas of modern, quantitative biology such as flow cytometry, expression profile analysis, function prediction and more. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate students
Introduction to R 2018

Course introduces essential ideas and tools of R, and covers statistical tests in R.

Introduction to R 2018 https://tess.elixir-europe.org/materials/introduction-to-r-2018 Course introduces essential ideas and tools of R, and covers statistical tests in R. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate students
Bioinformatics for Cancer Genomics 2018 Module 15-Clinical Data Integration

Course covers the key bioinformatics concepts and tools required to analyze cancer genomic data sets and access and work with data sets in the cloud.

Bioinformatics for Cancer Genomics 2018 Module 15-Clinical Data Integration https://tess.elixir-europe.org/materials/bioinformatics-for-cancer-genomics-2018-module-15-clinical-data-integration Course covers the key bioinformatics concepts and tools required to analyze cancer genomic data sets and access and work with data sets in the cloud. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate Students
Bioinformatics for Cancer Genomics 2018 Module 14-Variants to Networks

Course covers the key bioinformatics concepts and tools required to analyze cancer genomic data sets and access and work with data sets in the cloud.

Bioinformatics for Cancer Genomics 2018 Module 14-Variants to Networks https://tess.elixir-europe.org/materials/bioinformatics-for-cancer-genomics-2018-module-14-variants-to-networks Course covers the key bioinformatics concepts and tools required to analyze cancer genomic data sets and access and work with data sets in the cloud. Researchers Post-Doctoral Fellows Biologists, Genomicists, Computer Scientists Graduate Students