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1541 materials found

Ensembl Genomes (non-chordates): Quick tour

Ensembl Genomes (non-chordates): Quick tour from http://www.ebi.ac.uk/training/online/course/ensembl-genomes-non-chordates-quick-tour.

Keywords: DNA RNA

Ensembl Genomes (non-chordates): Quick tour https://tess.elixir-europe.org/materials/ensembl-genomes-non-chordates-quick-tour Ensembl Genomes (non-chordates): Quick tour from http://www.ebi.ac.uk/training/online/course/ensembl-genomes-non-chordates-quick-tour. DNA RNA 2016-06-14
EMBO Practical Course on Analysis of High-Throughput Sequencing Data

EMBO Practical Course on Analysis of High-Throughput Sequencing Data from http://www.ebi.ac.uk/training/online/course/embo-practical-course-analysis-high-throughput-seq.

Keywords: Gene Expression

EMBO Practical Course on Analysis of High-Throughput Sequencing Data https://tess.elixir-europe.org/materials/embo-practical-course-on-analysis-of-high-throughput-sequencing-data EMBO Practical Course on Analysis of High-Throughput Sequencing Data from http://www.ebi.ac.uk/training/online/course/embo-practical-course-analysis-high-throughput-seq. Gene Expression 2016-06-14
EMBL-EBI resources: An introduction

EMBL-EBI resources: An introduction from http://www.ebi.ac.uk/training/online/course/introduction-embl-ebi-resources-webinar.

Keywords: Cross domain

EMBL-EBI resources: An introduction https://tess.elixir-europe.org/materials/embl-ebi-resources-an-introduction EMBL-EBI resources: An introduction from http://www.ebi.ac.uk/training/online/course/introduction-embl-ebi-resources-webinar. Cross domain 2016-06-14
EGA: Quick tour

EGA: Quick tour from http://www.ebi.ac.uk/training/online/course/ega-quick-tour.

Keywords: DNA RNA

EGA: Quick tour https://tess.elixir-europe.org/materials/ega-quick-tour EGA: Quick tour from http://www.ebi.ac.uk/training/online/course/ega-quick-tour. DNA RNA 2016-06-14
EBI: Next Generation Sequencing Practical Course

EBI: Next Generation Sequencing Practical Course from http://www.ebi.ac.uk/training/online/course/ebi-next-generation-sequencing-practical-course.

Scientific topics: Sequencing

Keywords: DNA RNA, Gene Expression

EBI: Next Generation Sequencing Practical Course https://tess.elixir-europe.org/materials/ebi-next-generation-sequencing-practical-course EBI: Next Generation Sequencing Practical Course from http://www.ebi.ac.uk/training/online/course/ebi-next-generation-sequencing-practical-course. Sequencing DNA RNA, Gene Expression 2016-06-14
EBI Metagenomics portal: Submitting metagenomics data to the European Nucleotide Archive

EBI Metagenomics portal: Submitting metagenomics data to the European Nucleotide Archive from http://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-submitting-metagenomics-da.

Keywords: DNA RNA

EBI Metagenomics portal: Submitting metagenomics data to the European Nucleotide Archive https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-submitting-metagenomics-data-to-the-european-nucleotide-archive EBI Metagenomics portal: Submitting metagenomics data to the European Nucleotide Archive from http://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-submitting-metagenomics-da. DNA RNA 2016-06-14
EBI Metagenomics portal: Quick tour

EBI Metagenomics portal: Quick tour from http://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-quick-tour.

Scientific topics: Metagenomics

Keywords: DNA RNA

EBI Metagenomics portal: Quick tour https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-quick-tour EBI Metagenomics portal: Quick tour from http://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-quick-tour. Metagenomics DNA RNA 2016-06-14
diXa data warehouse: Exploring data from toxicogenomics studies

diXa data warehouse: Exploring data from toxicogenomics studies from http://www.ebi.ac.uk/training/online/course/dixa-data-warehouse-exploring-data-toxicogenomics.

Keywords: Gene Expression, Ontologies, Chemical biology

diXa data warehouse: Exploring data from toxicogenomics studies https://tess.elixir-europe.org/materials/dixa-data-warehouse-exploring-data-from-toxicogenomics-studies diXa data warehouse: Exploring data from toxicogenomics studies from http://www.ebi.ac.uk/training/online/course/dixa-data-warehouse-exploring-data-toxicogenomics. Gene Expression, Ontologies, Chemical biology 2016-06-14
DGVa: Quick tour

DGVa: Quick tour from http://www.ebi.ac.uk/training/online/course/dgva-quick-tour.

Keywords: DNA RNA

DGVa: Quick tour https://tess.elixir-europe.org/materials/dgva-quick-tour DGVa: Quick tour from http://www.ebi.ac.uk/training/online/course/dgva-quick-tour. DNA RNA 2016-06-14
Complex Portal: webinar

Complex Portal: webinar from http://www.ebi.ac.uk/training/online/course/complex-portal-webinar.

Keywords: Systems, Ontologies, Proteins, Structures

Complex Portal: webinar https://tess.elixir-europe.org/materials/complex-portal-webinar Complex Portal: webinar from http://www.ebi.ac.uk/training/online/course/complex-portal-webinar. Systems, Ontologies, Proteins, Structures 2016-06-14
ChEMBL: Quick tour

ChEMBL: Quick tour from http://www.ebi.ac.uk/training/online/course/chembl-quick-tour.

Keywords: Chemical biology

ChEMBL: Quick tour https://tess.elixir-europe.org/materials/chembl-quick-tour ChEMBL: Quick tour from http://www.ebi.ac.uk/training/online/course/chembl-quick-tour. Chemical biology 2016-06-14
Complex Portal: Quick tour

Complex Portal: Quick tour from http://www.ebi.ac.uk/training/online/course/complex-portal-quick-tour.

Keywords: Systems, Ontologies, Proteins, Structures

Complex Portal: Quick tour https://tess.elixir-europe.org/materials/complex-portal-quick-tour Complex Portal: Quick tour from http://www.ebi.ac.uk/training/online/course/complex-portal-quick-tour. Systems, Ontologies, Proteins, Structures 2016-06-14
ChEMBL: Exploring bioactive drug-like molecules

ChEMBL: Exploring bioactive drug-like molecules from http://www.ebi.ac.uk/training/online/course/chembl-exploring-bioactive-drug-molecules.

Keywords: Chemical biology, Structures

ChEMBL: Exploring bioactive drug-like molecules https://tess.elixir-europe.org/materials/chembl-exploring-bioactive-drug-like-molecules ChEMBL: Exploring bioactive drug-like molecules from http://www.ebi.ac.uk/training/online/course/chembl-exploring-bioactive-drug-molecules. Chemical biology, Structures 2016-06-14
ChEMBL walkthrough: webinar

ChEMBL walkthrough: webinar from http://www.ebi.ac.uk/training/online/course/chembl-walkthrough-webinar.

Keywords: Chemical biology

ChEMBL walkthrough: webinar https://tess.elixir-europe.org/materials/chembl-walkthrough-webinar ChEMBL walkthrough: webinar from http://www.ebi.ac.uk/training/online/course/chembl-walkthrough-webinar. Chemical biology 2016-06-14
ChEBI: The online chemical dictionary for small molecules

ChEBI: The online chemical dictionary for small molecules from http://www.ebi.ac.uk/training/online/course/chebi-online-chemical-dictionary-small-molecules.

Scientific topics: Small molecules

Keywords: Chemical biology

ChEBI: The online chemical dictionary for small molecules https://tess.elixir-europe.org/materials/chebi-the-online-chemical-dictionary-for-small-molecules ChEBI: The online chemical dictionary for small molecules from http://www.ebi.ac.uk/training/online/course/chebi-online-chemical-dictionary-small-molecules. Small molecules Chemical biology 2016-06-14
ChEBI: Quick tour

ChEBI: Quick tour from http://www.ebi.ac.uk/training/online/course/chebi-quick-tour.

Keywords: Chemical biology

ChEBI: Quick tour https://tess.elixir-europe.org/materials/chebi-quick-tour ChEBI: Quick tour from http://www.ebi.ac.uk/training/online/course/chebi-quick-tour. Chemical biology 2016-06-14
Cellular Microscopy Phenotype Ontology (CMPO): Quick tour

Cellular Microscopy Phenotype Ontology (CMPO): Quick tour from http://www.ebi.ac.uk/training/online/course/cellular-microscopy-phenotype-ontology-cmpo-quick.

Keywords: Ontologies, Cross domain

Cellular Microscopy Phenotype Ontology (CMPO): Quick tour https://tess.elixir-europe.org/materials/cellular-microscopy-phenotype-ontology-cmpo-quick-tour Cellular Microscopy Phenotype Ontology (CMPO): Quick tour from http://www.ebi.ac.uk/training/online/course/cellular-microscopy-phenotype-ontology-cmpo-quick. Ontologies, Cross domain 2016-06-14
BioSamples: Quick tour

BioSamples: Quick tour from http://www.ebi.ac.uk/training/online/course/biosamples-quick-tour.

Keywords: DNA RNA, Gene Expression, Ontologies, Proteins

BioSamples: Quick tour https://tess.elixir-europe.org/materials/biosamples-quick-tour BioSamples: Quick tour from http://www.ebi.ac.uk/training/online/course/biosamples-quick-tour. DNA RNA, Gene Expression, Ontologies, Proteins 2016-06-14
BioSamples Database RDF: webinar

BioSamples Database RDF: webinar from http://www.ebi.ac.uk/training/online/course/biosamples-database-rdf-webinar.

Keywords: DNA RNA, Gene Expression, Ontologies, Proteins

BioSamples Database RDF: webinar https://tess.elixir-europe.org/materials/biosamples-database-rdf-webinar BioSamples Database RDF: webinar from http://www.ebi.ac.uk/training/online/course/biosamples-database-rdf-webinar. DNA RNA, Gene Expression, Ontologies, Proteins 2016-06-14
BioModels Database: Quick tour

BioModels Database: Quick tour from http://www.ebi.ac.uk/training/online/course/biomodels-database-quick-tour.

Keywords: Systems

BioModels Database: Quick tour https://tess.elixir-europe.org/materials/biomodels-database-quick-tour BioModels Database: Quick tour from http://www.ebi.ac.uk/training/online/course/biomodels-database-quick-tour. Systems 2016-06-14
Biomedical data: Ethical, legal and social implications

Biomedical data: Ethical, legal and social implications from http://www.ebi.ac.uk/training/online/course/biomedical-data-ethical-legal-and-social-implicati.

Keywords: Cross domain

Biomedical data: Ethical, legal and social implications https://tess.elixir-europe.org/materials/biomedical-data-ethical-legal-and-social-implications Biomedical data: Ethical, legal and social implications from http://www.ebi.ac.uk/training/online/course/biomedical-data-ethical-legal-and-social-implicati. Cross domain 2016-06-14
Biomacromolecular structures: An introduction to EMBL-EBI resources

Biomacromolecular structures: An introduction to EMBL-EBI resources from http://www.ebi.ac.uk/training/online/course/biomacromolecular-structures-introduction-ebi-reso.

Keywords: Proteins

Biomacromolecular structures: An introduction to EMBL-EBI resources https://tess.elixir-europe.org/materials/biomacromolecular-structures-an-introduction-to-embl-ebi-resources Biomacromolecular structures: An introduction to EMBL-EBI resources from http://www.ebi.ac.uk/training/online/course/biomacromolecular-structures-introduction-ebi-reso. Proteins 2016-06-14
Biocuration: An introduction

Biocuration: An introduction from http://www.ebi.ac.uk/training/online/course/biocuration-introduction.

Keywords: Proteins, Cross domain

Biocuration: An introduction https://tess.elixir-europe.org/materials/biocuration-an-introduction Biocuration: An introduction from http://www.ebi.ac.uk/training/online/course/biocuration-introduction. Proteins, Cross domain 2016-06-14
ArrayExpress: Quick tour

This quick tour provides an overview of EMBL-EBI’s functional genomics database ArrayExpress. This course was updated in December 2015. An undergraduate-level understanding of biology is an advantage. You may wish to have a look at our Functional genomics: An introduction to EMBL-EBI...

Scientific topics: Gene expression, Gene expression and microarray, Functional genomics

Keywords: Gene Expression

ArrayExpress: Quick tour https://tess.elixir-europe.org/materials/arrayexpress-quick-tour This quick tour provides an overview of EMBL-EBI’s functional genomics database ArrayExpress. This course was updated in December 2015. An undergraduate-level understanding of biology is an advantage. You may wish to have a look at our Functional genomics: An introduction to EMBL-EBI resources before taking this course. Gene expression Gene expression and microarray Functional genomics Gene Expression Beginners 2016-06-14
Variant-calling

No description available

Keywords: Alignment, Annotation, BAM, BCF, De-novo-transcriptome-assembly, Exploratory-analysis, FASTQ, Pre-processing, QC, Statistical-model, Variant-calling, VCF

Variant-calling https://tess.elixir-europe.org/materials/variant-calling No description available Alignment, Annotation, BAM, BCF, De-novo-transcriptome-assembly, Exploratory-analysis, FASTQ, Pre-processing, QC, Statistical-model, Variant-calling, VCF
Guide to R swirl interactive lessons

This handout describes how to download the swirl package and start the basic interactive lessons to learn R.

Keywords: R-programming

Guide to R swirl interactive lessons https://tess.elixir-europe.org/materials/guide-to-r-swirl-interactive-lessons This handout describes how to download the swirl package and start the basic interactive lessons to learn R. R-programming
Day 4 - RNA-Seq Analysis

Day 4 focuses on the final steps after production of significant gene lists, including gene clustering, visualization, and annotation.

Keywords: Exploratory-analysis, Differential-expression, Statistical-model, Annotation

Day 4 - RNA-Seq Analysis https://tess.elixir-europe.org/materials/day-4-rna-seq-analysis Day 4 focuses on the final steps after production of significant gene lists, including gene clustering, visualization, and annotation. Exploratory-analysis, Differential-expression, Statistical-model, Annotation
Statistics and RNA-Seq

This lecture and optional practical introduce the relevant statistical concepts along with its computational counterparts used on a common RNA-Seq data analysis workflow.

Keywords: FASTQ, Alignment, BAM, Differential-expression, Statistical-model, Exploratory-analysis

Statistics and RNA-Seq https://tess.elixir-europe.org/materials/statistics-and-rna-seq This lecture and optional practical introduce the relevant statistical concepts along with its computational counterparts used on a common RNA-Seq data analysis workflow. FASTQ, Alignment, BAM, Differential-expression, Statistical-model, Exploratory-analysis
Introduction to RNA-seq analysis 2014

This lecture gives an overview how to perform an RNA-seq experiment. A general RNA-seq workflow is outlined when a good quality genome sequence is available for your species.

Keywords: Alignment, Differential-expression, Feature-summarisation, Pre-processing, QC

Introduction to RNA-seq analysis 2014 https://tess.elixir-europe.org/materials/introduction-to-rna-seq-analysis-2014 This lecture gives an overview how to perform an RNA-seq experiment. A general RNA-seq workflow is outlined when a good quality genome sequence is available for your species. Alignment, Differential-expression, Feature-summarisation, Pre-processing, QC
Introduction to R practice codes

These codes give an overview of R object types and programming language structure.

Keywords: R-programming

Introduction to R practice codes https://tess.elixir-europe.org/materials/introduction-to-r-practice-codes These codes give an overview of R object types and programming language structure. R-programming