Keywords: genomics
Develop your understanding of bioinformatics and SARS-CoV-2 data analysis:
Although testing and sequencing capacity has improved, in low-and-middle-income countries (LMICs) bioinformatics analyses still represent a bottleneck in the implementation of effective viral surveillance...
Keywords: bioinformatics, NGS bioinformatics, Next generation sequencing data analysis, covid-19, sars-cov-2, coronavirus, data-analysis, data visualization, genomics, Genomic data, pipelines, Galaxy, nexstrain
Resource type: FREE online course
Discover how sample strategies can affect scientific research and results:
Sampling is a critical part of research in any field. In studying a disease such as Covid-19, it’s imperative that your sample and sampling methods are best-suited to reflect accurate results.
Supported by expert...
Keywords: metadata, Sequencing, genomics, Genomic data, data quality, scientific quality assurance, data sharing, ethics, data ethics, public health, coronavirus, sars-cov-2, covid-19, data linkage
Resource type: FREE online course
Explore genome sequencing and the SARS-CoV-2 genome:
The course starts with a review of how viruses cause diseases and pandemics, examining the factors that can lead to a public health emergency.
You’ll also get a comprehensive introduction to the SARS-CoV-2 genome structure, and learn...
Keywords: coronavirus, covid-19, sars-cov-2, mutations, Variant calling, Sequencing, pandemic, surveillance, genomics, public health, Genomic data
Resource type: FREE online course
Datanator is an integrated database of genomic and biochemical data designed to help investigators find data about specific molecules and reactions in specific organisms and specific environments for meta-analyses and mechanistic models. Datanator currently includes metabolite concentrations, RNA...
Scientific topics: Omics, Bioinformatics, Systems biology, Cell biology, Molecular biology
Operations: Filtering, Query and retrieval
Keywords: genomics, Proteomics, transcriptomics, Metabolomics, reaction kinetics, Kinetic modeling, meta analysis
Resource type: Tutorial
This is an online tutorial where you can learn how to install the Beacon application and "light a beacon" (i.e. deploy the Beacon application) on your data.
The tutorial is hosted on the ELIXIR-SI eLearning Platform (EeLP). The main part of the tutorial are learning materials with...
Scientific topics: Genomics
Keywords: genomics, open access, eLearning, EeLP
Resource type: Video, Manual, Slides, Installation instructions
PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics. It allows querying and visualising structural and functional annotations, gene families, protein domains, phylogenetic trees, and genome organization. PLAZA 4.0 is the latest iteration of the PLAZA...
Scientific topics: Plant biology, Functional genomics, Comparative genomics, Evolutionary biology, Phylogenomics, Genotype and phenotype
Operations: Annotation, Visualisation, Comparison
Keywords: plants, Plants bioinformatics, genomics, Visualisation, Annotation
Resource type: Training materials