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47 materials found

Keywords: Exploratory-analysis  or Descriptive statistics  or Chemical biology  or Gene Expression 


EMBL-EBI Train Online

If you work in the life sciences, you may find that you’re spending less time doing experiments and more time analysing huge amounts of biological data. Train online is here to help you do this quickly and efficiently.

Scientific topics: Bioinformatics

Keywords: Bioinformatics, Chemical biology, Cross domain, Dna rna, Gene expression, Literature, Ontologies, Proteins, Structures, Systems

EMBL-EBI Train Online https://tess.elixir-europe.org/materials/embl-ebi-train-online If you work in the life sciences, you may find that you’re spending less time doing experiments and more time analysing huge amounts of biological data. Train online is here to help you do this quickly and efficiently. Bioinformatics Bioinformatics, Chemical biology, Cross domain, Dna rna, Gene expression, Literature, Ontologies, Proteins, Structures, Systems Beginner informatics Life sciences 2018-05-11
RNA-seq module Frederik Coppens

Material concerning RNA-seq analysis, with an emphasis on the statistical aspects.

Keywords: FASTQ, Alignment, BAM, Differential-expression, Statistical-model, Exploratory-analysis

RNA-seq module Frederik Coppens https://tess.elixir-europe.org/materials/rna-seq-module-frederik-coppens-4a328fa8-0bef-471c-84e4-b0d89d216128 Material concerning RNA-seq analysis, with an emphasis on the statistical aspects. FASTQ, Alignment, BAM, Differential-expression, Statistical-model, Exploratory-analysis
Functional genomics (III): Submitting your data and functional genomics databases

Functional genomics (III): Submitting your data and functional genomics databases from http://www.ebi.ac.uk/training/online/course/functional-genomics-iii-submitting-your-data-and-f.

Keywords: Gene Expression

Functional genomics (III): Submitting your data and functional genomics databases https://tess.elixir-europe.org/materials/functional-genomics-iii-submitting-your-data-and-functional-genomics-databases Functional genomics (III): Submitting your data and functional genomics databases from http://www.ebi.ac.uk/training/online/course/functional-genomics-iii-submitting-your-data-and-f. Gene Expression 2016-06-14
Functional genomics (II): Common technologies and data analysis methods

Functional genomics (II): Common technologies and data analysis methods from http://www.ebi.ac.uk/training/online/course/functional-genomics-ii-common-technologies-and-dat.

Keywords: Gene Expression

Functional genomics (II): Common technologies and data analysis methods https://tess.elixir-europe.org/materials/functional-genomics-ii-common-technologies-and-data-analysis-methods Functional genomics (II): Common technologies and data analysis methods from http://www.ebi.ac.uk/training/online/course/functional-genomics-ii-common-technologies-and-dat. Gene Expression 2016-06-14
Functional genomics (I): Introduction and designing experiments

Functional genomics (I): Introduction and designing experiments from http://www.ebi.ac.uk/training/online/course/functional-genomics-i-introduction-and-designing-e.

Keywords: Gene Expression

Functional genomics (I): Introduction and designing experiments https://tess.elixir-europe.org/materials/functional-genomics-i-introduction-and-designing-experiments Functional genomics (I): Introduction and designing experiments from http://www.ebi.ac.uk/training/online/course/functional-genomics-i-introduction-and-designing-e. Gene Expression 2016-06-14
Sal's old statistics videos

This tutorial covers central tendency and dispersion. It is redundant with the other tutorials on this topic, but it has the benefit of messy handwriting and a cheap microphone. This is Sal circa 2007 so take it all with a grain of salt (or just skip it altogether).

Keywords: Descriptive statistics

Sal's old statistics videos https://tess.elixir-europe.org/materials/sal-s-old-statistics-videos This tutorial covers central tendency and dispersion. It is redundant with the other tutorials on this topic, but it has the benefit of messy handwriting and a cheap microphone. This is Sal circa 2007 so take it all with a grain of salt (or just skip it altogether). Descriptive statistics 2016-08-14
Variance and standard deviation

We have tools (like the arithmetic mean) to measure central tendency and are now curious about representing how much the data in a set varies from that central tendency. In this tutorial we introduce the variance and standard deviation (which is just the square root of the variance) as two...

Keywords: Descriptive statistics

Variance and standard deviation https://tess.elixir-europe.org/materials/variance-and-standard-deviation We have tools (like the arithmetic mean) to measure central tendency and are now curious about representing how much the data in a set varies from that central tendency. In this tutorial we introduce the variance and standard deviation (which is just the square root of the variance) as two commonly used tools for doing this. Descriptive statistics 2016-08-14
Box-and-whisker plots

Whether you're looking at scientific data or stock price charts, box-and-whisker plots can show up in your life. This tutorial covers what they are, how to read them and how to construct them. We'd consider this tutorial very optional, but it is a good application of dealing with medians and...

Keywords: Descriptive statistics

Box-and-whisker plots https://tess.elixir-europe.org/materials/box-and-whisker-plots Whether you're looking at scientific data or stock price charts, box-and-whisker plots can show up in your life. This tutorial covers what they are, how to read them and how to construct them. We'd consider this tutorial very optional, but it is a good application of dealing with medians and ranges. Descriptive statistics 2016-08-14
Measures of central tendency

This is the foundational tutorial for the rest of statistics. We start thinking about how you can represent a set of numbers with one number that somehow represents the "center". We then talk about the differences between populations, samples, parameters and statistics.

Keywords: Descriptive statistics

Measures of central tendency https://tess.elixir-europe.org/materials/measures-of-central-tendency This is the foundational tutorial for the rest of statistics. We start thinking about how you can represent a set of numbers with one number that somehow represents the "center". We then talk about the differences between populations, samples, parameters and statistics. Descriptive statistics 2016-08-14
PDBe: Searching for biological macromolecular structures

PDBe: Searching for biological macromolecular structures from http://www.ebi.ac.uk/training/online/course/pdbe-searching-biological-macromolecular-structure.

Keywords: Proteins, Chemical biology, Structures

PDBe: Searching for biological macromolecular structures https://tess.elixir-europe.org/materials/pdbe-searching-for-biological-macromolecular-structures PDBe: Searching for biological macromolecular structures from http://www.ebi.ac.uk/training/online/course/pdbe-searching-biological-macromolecular-structure. Proteins, Chemical biology, Structures 2016-05-26
Druggability and the druggable genome

Druggability and the druggable genome from http://www.ebi.ac.uk/training/online/course/druggability-and-druggable-genome.

Keywords: Chemical biology

Druggability and the druggable genome https://tess.elixir-europe.org/materials/druggability-and-the-druggable-genome Druggability and the druggable genome from http://www.ebi.ac.uk/training/online/course/druggability-and-druggable-genome. Chemical biology 2016-06-14
Drug repurposing

Drug repurposing from http://www.ebi.ac.uk/training/online/course/drug-repurposing.

Keywords: Chemical biology

Drug repurposing https://tess.elixir-europe.org/materials/drug-repurposing Drug repurposing from http://www.ebi.ac.uk/training/online/course/drug-repurposing. Chemical biology 2016-06-14
Computational chemistry in drug discovery

Computational chemistry in drug discovery from http://www.ebi.ac.uk/training/online/course/computational-chemistry-drug-discovery.

Keywords: Chemical biology

Computational chemistry in drug discovery https://tess.elixir-europe.org/materials/computational-chemistry-in-drug-discovery Computational chemistry in drug discovery from http://www.ebi.ac.uk/training/online/course/computational-chemistry-drug-discovery. Chemical biology 2016-06-14
ArrayExpress: Discover functional genomics data quickly and easily

ArrayExpress: Discover functional genomics data quickly and easily from http://www.ebi.ac.uk/training/online/course/arrayexpress-discover-functional-genomics-data-qui.

Keywords: Gene Expression

ArrayExpress: Discover functional genomics data quickly and easily https://tess.elixir-europe.org/materials/arrayexpress-discover-functional-genomics-data-quickly-and-easily ArrayExpress: Discover functional genomics data quickly and easily from http://www.ebi.ac.uk/training/online/course/arrayexpress-discover-functional-genomics-data-qui. Gene Expression 2016-06-14
PDBeChem: Searching for small molecules and small molecule fragments

PDBeChem: Searching for small molecules and small molecule fragments from http://www.ebi.ac.uk/training/online/course/pdbechem-searching-small-molecules-and-small-molec.

Scientific topics: Small molecules

Keywords: Proteins, Chemical biology, Structures

PDBeChem: Searching for small molecules and small molecule fragments https://tess.elixir-europe.org/materials/pdbechem-searching-for-small-molecules-and-small-molecule-fragments PDBeChem: Searching for small molecules and small molecule fragments from http://www.ebi.ac.uk/training/online/course/pdbechem-searching-small-molecules-and-small-molec. Small molecules Proteins, Chemical biology, Structures 2016-04-22
PDBe: Searching the Protein Data Bank

PDBe: Searching the Protein Data Bank from http://www.ebi.ac.uk/training/online/course/pdbe-searching-protein-data-bank.

Keywords: Proteins, Chemical biology, Structures

PDBe: Searching the Protein Data Bank https://tess.elixir-europe.org/materials/pdbe-searching-the-protein-data-bank PDBe: Searching the Protein Data Bank from http://www.ebi.ac.uk/training/online/course/pdbe-searching-protein-data-bank. Proteins, Chemical biology, Structures 2016-05-26
PDBe: Exploring a Protein Data Bank (PDB) entry

PDBe: Exploring a Protein Data Bank (PDB) entry from http://www.ebi.ac.uk/training/online/course/pdbe-exploring-protein-data-bank-pdb-entry.

Keywords: Proteins, Chemical biology, Structures

PDBe: Exploring a Protein Data Bank (PDB) entry https://tess.elixir-europe.org/materials/pdbe-exploring-a-protein-data-bank-pdb-entry PDBe: Exploring a Protein Data Bank (PDB) entry from http://www.ebi.ac.uk/training/online/course/pdbe-exploring-protein-data-bank-pdb-entry. Proteins, Chemical biology, Structures 2016-06-14
myChEMBL: webinar

myChEMBL: webinar from http://www.ebi.ac.uk/training/online/course/mychembl-webinar.

Keywords: Chemical biology

myChEMBL: webinar https://tess.elixir-europe.org/materials/mychembl-webinar myChEMBL: webinar from http://www.ebi.ac.uk/training/online/course/mychembl-webinar. Chemical biology 2016-06-14
PDBe: An introduction to search and entry pages: webinar

PDBe: An introduction to search and entry pages: webinar from http://www.ebi.ac.uk/training/online/course/pdbe-introduction-search-and-entry-pages-webinar.

Keywords: Proteins, Chemical biology, Structures

PDBe: An introduction to search and entry pages: webinar https://tess.elixir-europe.org/materials/pdbe-an-introduction-to-search-and-entry-pages-webinar PDBe: An introduction to search and entry pages: webinar from http://www.ebi.ac.uk/training/online/course/pdbe-introduction-search-and-entry-pages-webinar. Proteins, Chemical biology, Structures 2016-04-14
Metabolomics: An introduction

Metabolomics: An introduction from http://www.ebi.ac.uk/training/online/course/introduction-metabolomics.

Keywords: Systems, Chemical biology

Metabolomics: An introduction https://tess.elixir-europe.org/materials/metabolomics-an-introduction Metabolomics: An introduction from http://www.ebi.ac.uk/training/online/course/introduction-metabolomics. Systems, Chemical biology 2016-06-14
MetaboLights: Quick tour

MetaboLights: Quick tour from http://www.ebi.ac.uk/training/online/course/metabolights-quick-tour-0.

Keywords: Systems, Chemical biology

MetaboLights: Quick tour https://tess.elixir-europe.org/materials/metabolights-quick-tour MetaboLights: Quick tour from http://www.ebi.ac.uk/training/online/course/metabolights-quick-tour-0. Systems, Chemical biology 2016-06-14
Functional genomics: An introduction to EMBL-EBI resources

Functional genomics: An introduction to EMBL-EBI resources from http://www.ebi.ac.uk/training/online/course/functional-genomics-introduction-embl-ebi-resource-1.

Keywords: Gene Expression

Functional genomics: An introduction to EMBL-EBI resources https://tess.elixir-europe.org/materials/functional-genomics-an-introduction-to-embl-ebi-resources Functional genomics: An introduction to EMBL-EBI resources from http://www.ebi.ac.uk/training/online/course/functional-genomics-introduction-embl-ebi-resource-1. Gene Expression 2016-06-14
Expression Atlas: Quick tour

Expression Atlas: Quick tour from http://www.ebi.ac.uk/training/online/course/expression-atlas-quick-tour-0.

Keywords: Gene Expression

Expression Atlas: Quick tour https://tess.elixir-europe.org/materials/expression-atlas-quick-tour Expression Atlas: Quick tour from http://www.ebi.ac.uk/training/online/course/expression-atlas-quick-tour-0. Gene Expression 2016-06-14
Enzyme Portal: Quick tour

Enzyme Portal: Quick tour from http://www.ebi.ac.uk/training/online/course/enzyme-portal-quick-tour-0.

Keywords: Proteins, Chemical biology

Enzyme Portal: Quick tour https://tess.elixir-europe.org/materials/enzyme-portal-quick-tour Enzyme Portal: Quick tour from http://www.ebi.ac.uk/training/online/course/enzyme-portal-quick-tour-0. Proteins, Chemical biology 2016-06-14
EMBO Practical Course on Analysis of High-Throughput Sequencing Data

EMBO Practical Course on Analysis of High-Throughput Sequencing Data from http://www.ebi.ac.uk/training/online/course/embo-practical-course-analysis-high-throughput-seq.

Keywords: Gene Expression

EMBO Practical Course on Analysis of High-Throughput Sequencing Data https://tess.elixir-europe.org/materials/embo-practical-course-on-analysis-of-high-throughput-sequencing-data EMBO Practical Course on Analysis of High-Throughput Sequencing Data from http://www.ebi.ac.uk/training/online/course/embo-practical-course-analysis-high-throughput-seq. Gene Expression 2016-06-14
EBI: Next Generation Sequencing Practical Course

EBI: Next Generation Sequencing Practical Course from http://www.ebi.ac.uk/training/online/course/ebi-next-generation-sequencing-practical-course.

Scientific topics: Sequencing

Keywords: DNA RNA, Gene Expression

EBI: Next Generation Sequencing Practical Course https://tess.elixir-europe.org/materials/ebi-next-generation-sequencing-practical-course EBI: Next Generation Sequencing Practical Course from http://www.ebi.ac.uk/training/online/course/ebi-next-generation-sequencing-practical-course. Sequencing DNA RNA, Gene Expression 2016-06-14
diXa data warehouse: Exploring data from toxicogenomics studies

diXa data warehouse: Exploring data from toxicogenomics studies from http://www.ebi.ac.uk/training/online/course/dixa-data-warehouse-exploring-data-toxicogenomics.

Keywords: Gene Expression, Ontologies, Chemical biology

diXa data warehouse: Exploring data from toxicogenomics studies https://tess.elixir-europe.org/materials/dixa-data-warehouse-exploring-data-from-toxicogenomics-studies diXa data warehouse: Exploring data from toxicogenomics studies from http://www.ebi.ac.uk/training/online/course/dixa-data-warehouse-exploring-data-toxicogenomics. Gene Expression, Ontologies, Chemical biology 2016-06-14
ChEMBL: Quick tour

ChEMBL: Quick tour from http://www.ebi.ac.uk/training/online/course/chembl-quick-tour.

Keywords: Chemical biology

ChEMBL: Quick tour https://tess.elixir-europe.org/materials/chembl-quick-tour ChEMBL: Quick tour from http://www.ebi.ac.uk/training/online/course/chembl-quick-tour. Chemical biology 2016-06-14
ChEMBL: Exploring bioactive drug-like molecules

ChEMBL: Exploring bioactive drug-like molecules from http://www.ebi.ac.uk/training/online/course/chembl-exploring-bioactive-drug-molecules.

Keywords: Chemical biology, Structures

ChEMBL: Exploring bioactive drug-like molecules https://tess.elixir-europe.org/materials/chembl-exploring-bioactive-drug-like-molecules ChEMBL: Exploring bioactive drug-like molecules from http://www.ebi.ac.uk/training/online/course/chembl-exploring-bioactive-drug-molecules. Chemical biology, Structures 2016-06-14
ChEMBL walkthrough: webinar

ChEMBL walkthrough: webinar from http://www.ebi.ac.uk/training/online/course/chembl-walkthrough-webinar.

Keywords: Chemical biology

ChEMBL walkthrough: webinar https://tess.elixir-europe.org/materials/chembl-walkthrough-webinar ChEMBL walkthrough: webinar from http://www.ebi.ac.uk/training/online/course/chembl-walkthrough-webinar. Chemical biology 2016-06-14