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31 materials found

Keywords: Experimental-design  or DNA RNA 


Bioinformática con Ñ

"Bioinformática con Ñ" is a project born in 2013 aimed to provide specialized educational bibliography on Bioinformatics for Spanish speakers. The first release, published in 2014 and edited by Álvaro Sebastián and Alberto Pascual-García, consists on more than 500 pages where the following...

Scientific topics: Systems biology, Bioinformatics

Keywords: introduction to bioinformatics, structural biology, biomolecular databases, Systems biology, phylogenetics, Programming, Sequence Analysis, DNA RNA, Virtual Screening, molecular evolution, molecular dynamics, Molecular docking, normal modes analysis, Proteins, protein folding, protein structure alignment, chromatin structure, intrinsically disordered proteins, data minning, R-programming, parallel computing, bibliography management

Resource type: Book

Bioinformática con Ñ https://tess.elixir-europe.org/materials/bioinformatica-con-n "Bioinformática con Ñ" is a project born in 2013 aimed to provide specialized educational bibliography on Bioinformatics for Spanish speakers. The first release, published in 2014 and edited by Álvaro Sebastián and Alberto Pascual-García, consists on more than 500 pages where the following matters are covered: biomedical databases, sequence analysis, phylogeny and evolution, structural biology, including diverse topics such as docking, virtual screening or molecular dynamics, statistics and R, systems biology, programming skills, data mining, parallel computation, bibliography management and science article writing. Portada: Enrique Sahagún Systems biology Bioinformatics introduction to bioinformatics, structural biology, biomolecular databases, Systems biology, phylogenetics, Programming, Sequence Analysis, DNA RNA, Virtual Screening, molecular evolution, molecular dynamics, Molecular docking, normal modes analysis, Proteins, protein folding, protein structure alignment, chromatin structure, intrinsically disordered proteins, data minning, R-programming, parallel computing, bibliography management Anyone interested in bioinformatics
ChIP-seq analysis using R - Experimental design and peak calling.

This lecture is an introduction to ChIP-seq experiments and data. It provides a theoretical background to experimental design and peak calling.

Keywords: ChIP-Seq, Experimental-design, Peak-calling, Visualisation

ChIP-seq analysis using R - Experimental design and peak calling. https://tess.elixir-europe.org/materials/chip-seq-analysis-using-r-experimental-design-and-peak-calling-cfd4c18f-6c86-45ae-ab0b-630422c76af6 This lecture is an introduction to ChIP-seq experiments and data. It provides a theoretical background to experimental design and peak calling. ChIP-Seq, Experimental-design, Peak-calling, Visualisation
ChIP-seq analysis using R

ChIP-seq is the most commonly used technique to study binding profiles of chromatin proteins, such as TFs or histone modification patterns. This course is an introduction to ChIP-seq data, and data analysis mainly using R, some command line based peak-callers and online software. It provides a...

Keywords: ChIP-Seq, Experimental-design, Peak-calling, Differential-binding, Visualisation, Annotation, Homo-sapiens, R-programming

ChIP-seq analysis using R https://tess.elixir-europe.org/materials/chip-seq-analysis-using-r-5049bc9c-9bbb-4a6b-9244-37ed3980da0e ChIP-seq is the most commonly used technique to study binding profiles of chromatin proteins, such as TFs or histone modification patterns. This course is an introduction to ChIP-seq data, and data analysis mainly using R, some command line based peak-callers and online software. It provides a theoretical background and the means to perform peak calling and differential binding analysis. ChIP-Seq, Experimental-design, Peak-calling, Differential-binding, Visualisation, Annotation, Homo-sapiens, R-programming
ChIP-seq analysis using R - Experimental design and peak calling.

This lecture is an introduction to ChIP-seq experiments and data. It provides a theoretical background to experimental design and peak calling.

Keywords: ChIP-Seq, Experimental-design, Peak-calling, Visualisation

ChIP-seq analysis using R - Experimental design and peak calling. https://tess.elixir-europe.org/materials/chip-seq-analysis-using-r-experimental-design-and-peak-calling This lecture is an introduction to ChIP-seq experiments and data. It provides a theoretical background to experimental design and peak calling. ChIP-Seq, Experimental-design, Peak-calling, Visualisation
ChIP-seq analysis using R - Quality Control

This practical illustrates steps that can be undertaken to assess the quality of the sequencing data. We will start from the fastq files and assess their quality in respect to potential contamination and technical artifacts.

Scientific topics: RNA-Seq

Keywords: ChIP-Seq, RNA-Seq, QC, Data-format, Experimental-design

ChIP-seq analysis using R - Quality Control https://tess.elixir-europe.org/materials/chip-seq-analysis-using-r-quality-control This practical illustrates steps that can be undertaken to assess the quality of the sequencing data. We will start from the fastq files and assess their quality in respect to potential contamination and technical artifacts. RNA-Seq ChIP-Seq, RNA-Seq, QC, Data-format, Experimental-design
ChIP-seq analysis using R - File formats and QC

This lecture introduces the file formats of sequencing data before alignment and covers the general quality control of sequencing data focussing on RNA-Seq and ChIP-Seq.

Scientific topics: RNA-Seq

Keywords: ChIP-Seq, RNA-Seq, QC, Data-format, Experimental-design

ChIP-seq analysis using R - File formats and QC https://tess.elixir-europe.org/materials/chip-seq-analysis-using-r-file-formats-and-qc This lecture introduces the file formats of sequencing data before alignment and covers the general quality control of sequencing data focussing on RNA-Seq and ChIP-Seq. RNA-Seq ChIP-Seq, RNA-Seq, QC, Data-format, Experimental-design
ChIP-seq analysis using R - Quality Control Walkthrough

This practical illustrates steps that can be undertaken to assess the quality of the sequencing data. We will start from the fastq files and assess their quality in respect to potential contamination and technical artifacts.

Scientific topics: RNA-Seq

Keywords: ChIP-Seq, RNA-Seq, QC, Data-format, Experimental-design

ChIP-seq analysis using R - Quality Control Walkthrough https://tess.elixir-europe.org/materials/chip-seq-analysis-using-r-quality-control-walkthrough This practical illustrates steps that can be undertaken to assess the quality of the sequencing data. We will start from the fastq files and assess their quality in respect to potential contamination and technical artifacts. RNA-Seq ChIP-Seq, RNA-Seq, QC, Data-format, Experimental-design
Phylogenetics: An introduction

Phylogenetics: An introduction from http://www.ebi.ac.uk/training/online/course/introduction-phylogenetics, added automatically.

Scientific topics: Phylogenetics

Keywords: DNA RNA

Phylogenetics: An introduction https://tess.elixir-europe.org/materials/phylogenetics-an-introduction Phylogenetics: An introduction from http://www.ebi.ac.uk/training/online/course/introduction-phylogenetics, added automatically. Phylogenetics DNA RNA 2016-03-05
Locus Reference Genomic (LRG) resource: webinar

Locus Reference Genomic (LRG) resource: webinar from http://www.ebi.ac.uk/training/online/course/locus-reference-genomic-lrg-resource-webinar.

Keywords: DNA RNA

Locus Reference Genomic (LRG) resource: webinar https://tess.elixir-europe.org/materials/locus-reference-genomic-lrg-resource-webinar Locus Reference Genomic (LRG) resource: webinar from http://www.ebi.ac.uk/training/online/course/locus-reference-genomic-lrg-resource-webinar. DNA RNA 2016-06-14
Genomics: An introduction to EMBL-EBI resources

Genomics: An introduction to EMBL-EBI resources from http://www.ebi.ac.uk/training/online/course/genomics-introduction-ebi-resources.

Keywords: DNA RNA

Genomics: An introduction to EMBL-EBI resources https://tess.elixir-europe.org/materials/genomics-an-introduction-to-embl-ebi-resources Genomics: An introduction to EMBL-EBI resources from http://www.ebi.ac.uk/training/online/course/genomics-introduction-ebi-resources. DNA RNA 2016-06-14
Genomics resources: webinar

Genomics resources: webinar from http://www.ebi.ac.uk/training/online/course/resources-genomics-webinar.

Keywords: DNA RNA

Genomics resources: webinar https://tess.elixir-europe.org/materials/genomics-resources-webinar Genomics resources: webinar from http://www.ebi.ac.uk/training/online/course/resources-genomics-webinar. DNA RNA 2016-06-14
European Nucleotide Archive: Using the primary nucleotide sequence resource

European Nucleotide Archive: Using the primary nucleotide sequence resource from http://www.ebi.ac.uk/training/online/course/european-nucleotide-archive-using-primary-nucleoti.

Keywords: DNA RNA

European Nucleotide Archive: Using the primary nucleotide sequence resource https://tess.elixir-europe.org/materials/european-nucleotide-archive-using-the-primary-nucleotide-sequence-resource European Nucleotide Archive: Using the primary nucleotide sequence resource from http://www.ebi.ac.uk/training/online/course/european-nucleotide-archive-using-primary-nucleoti. DNA RNA 2016-06-14
European Nucleotide Archive: Quick tour

European Nucleotide Archive: Quick tour from http://www.ebi.ac.uk/training/online/course/european-nucleotide-archive-quick-tour.

Keywords: DNA RNA

European Nucleotide Archive: Quick tour https://tess.elixir-europe.org/materials/european-nucleotide-archive-quick-tour European Nucleotide Archive: Quick tour from http://www.ebi.ac.uk/training/online/course/european-nucleotide-archive-quick-tour. DNA RNA 2016-06-14
European Nucleotide Archive (ENA): An introduction: webinar

European Nucleotide Archive (ENA): An introduction: webinar from http://www.ebi.ac.uk/training/online/course/european-nucleotide-archive-ena-introduction-webin.

Keywords: DNA RNA

European Nucleotide Archive (ENA): An introduction: webinar https://tess.elixir-europe.org/materials/european-nucleotide-archive-ena-an-introduction-webinar European Nucleotide Archive (ENA): An introduction: webinar from http://www.ebi.ac.uk/training/online/course/european-nucleotide-archive-ena-introduction-webin. DNA RNA 2016-06-14
Ensembl: Quick tour

Ensembl: Quick tour from http://www.ebi.ac.uk/training/online/course/ensembl-quick-tour-0.

Keywords: DNA RNA

Ensembl: Quick tour https://tess.elixir-europe.org/materials/ensembl-quick-tour Ensembl: Quick tour from http://www.ebi.ac.uk/training/online/course/ensembl-quick-tour-0. DNA RNA 2016-06-14
Ensembl: Filmed browser workshop

Ensembl: Filmed browser workshop from http://www.ebi.ac.uk/training/online/course/ensembl-filmed-browser-workshop.

Keywords: DNA RNA

Ensembl: Filmed browser workshop https://tess.elixir-europe.org/materials/ensembl-filmed-browser-workshop Ensembl: Filmed browser workshop from http://www.ebi.ac.uk/training/online/course/ensembl-filmed-browser-workshop. DNA RNA 2016-06-14
Ensembl: Filmed API workshop

Ensembl: Filmed API workshop from http://www.ebi.ac.uk/training/online/course/ensembl-filmed-api-workshop.

Keywords: DNA RNA

Ensembl: Filmed API workshop https://tess.elixir-europe.org/materials/ensembl-filmed-api-workshop Ensembl: Filmed API workshop from http://www.ebi.ac.uk/training/online/course/ensembl-filmed-api-workshop. DNA RNA 2016-06-14
Ensembl: Browsing chordate genomes

Ensembl: Browsing chordate genomes from http://www.ebi.ac.uk/training/online/course/ensembl-browsing-chordate-genomes.

Keywords: DNA RNA

Ensembl: Browsing chordate genomes https://tess.elixir-europe.org/materials/ensembl-browsing-chordate-genomes Ensembl: Browsing chordate genomes from http://www.ebi.ac.uk/training/online/course/ensembl-browsing-chordate-genomes. DNA RNA 2016-06-14
Ensembl Variant Effect Predictor (VEP): webinar

Ensembl Variant Effect Predictor (VEP): webinar from http://www.ebi.ac.uk/training/online/course/ensembl-variant-effect-predictor-vep-webinar.

Keywords: DNA RNA

Ensembl Variant Effect Predictor (VEP): webinar https://tess.elixir-europe.org/materials/ensembl-variant-effect-predictor-vep-webinar Ensembl Variant Effect Predictor (VEP): webinar from http://www.ebi.ac.uk/training/online/course/ensembl-variant-effect-predictor-vep-webinar. DNA RNA 2016-06-14
Ensembl tools: webinar

Ensembl tools: webinar from http://www.ebi.ac.uk/training/online/course/ensembl-tools-webinar.

Keywords: DNA RNA

Ensembl tools: webinar https://tess.elixir-europe.org/materials/ensembl-tools-webinar Ensembl tools: webinar from http://www.ebi.ac.uk/training/online/course/ensembl-tools-webinar. DNA RNA 2016-06-14
Ensembl browser webinar series (2016)

Ensembl browser webinar series (2016) from http://www.ebi.ac.uk/training/online/course/ensembl-browser-webinar-series-2016.

Keywords: DNA RNA

Ensembl browser webinar series (2016) https://tess.elixir-europe.org/materials/ensembl-browser-webinar-series-2016 Ensembl browser webinar series (2016) from http://www.ebi.ac.uk/training/online/course/ensembl-browser-webinar-series-2016. DNA RNA 2016-06-14
Ensembl Genomes (non-chordates): Quick tour

Ensembl Genomes (non-chordates): Quick tour from http://www.ebi.ac.uk/training/online/course/ensembl-genomes-non-chordates-quick-tour.

Keywords: DNA RNA

Ensembl Genomes (non-chordates): Quick tour https://tess.elixir-europe.org/materials/ensembl-genomes-non-chordates-quick-tour Ensembl Genomes (non-chordates): Quick tour from http://www.ebi.ac.uk/training/online/course/ensembl-genomes-non-chordates-quick-tour. DNA RNA 2016-06-14
EGA: Quick tour

EGA: Quick tour from http://www.ebi.ac.uk/training/online/course/ega-quick-tour.

Keywords: DNA RNA

EGA: Quick tour https://tess.elixir-europe.org/materials/ega-quick-tour EGA: Quick tour from http://www.ebi.ac.uk/training/online/course/ega-quick-tour. DNA RNA 2016-06-14
EBI: Next Generation Sequencing Practical Course

EBI: Next Generation Sequencing Practical Course from http://www.ebi.ac.uk/training/online/course/ebi-next-generation-sequencing-practical-course.

Scientific topics: Sequencing

Keywords: DNA RNA, Gene Expression

EBI: Next Generation Sequencing Practical Course https://tess.elixir-europe.org/materials/ebi-next-generation-sequencing-practical-course EBI: Next Generation Sequencing Practical Course from http://www.ebi.ac.uk/training/online/course/ebi-next-generation-sequencing-practical-course. Sequencing DNA RNA, Gene Expression 2016-06-14
EBI Metagenomics portal: Submitting metagenomics data to the European Nucleotide Archive

EBI Metagenomics portal: Submitting metagenomics data to the European Nucleotide Archive from http://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-submitting-metagenomics-da.

Keywords: DNA RNA

EBI Metagenomics portal: Submitting metagenomics data to the European Nucleotide Archive https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-submitting-metagenomics-data-to-the-european-nucleotide-archive EBI Metagenomics portal: Submitting metagenomics data to the European Nucleotide Archive from http://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-submitting-metagenomics-da. DNA RNA 2016-06-14
EBI Metagenomics portal: Quick tour

EBI Metagenomics portal: Quick tour from http://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-quick-tour.

Scientific topics: Metagenomics

Keywords: DNA RNA

EBI Metagenomics portal: Quick tour https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-quick-tour EBI Metagenomics portal: Quick tour from http://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-quick-tour. Metagenomics DNA RNA 2016-06-14
DGVa: Quick tour

DGVa: Quick tour from http://www.ebi.ac.uk/training/online/course/dgva-quick-tour.

Keywords: DNA RNA

DGVa: Quick tour https://tess.elixir-europe.org/materials/dgva-quick-tour DGVa: Quick tour from http://www.ebi.ac.uk/training/online/course/dgva-quick-tour. DNA RNA 2016-06-14
BioSamples: Quick tour

BioSamples: Quick tour from http://www.ebi.ac.uk/training/online/course/biosamples-quick-tour.

Keywords: DNA RNA, Gene Expression, Ontologies, Proteins

BioSamples: Quick tour https://tess.elixir-europe.org/materials/biosamples-quick-tour BioSamples: Quick tour from http://www.ebi.ac.uk/training/online/course/biosamples-quick-tour. DNA RNA, Gene Expression, Ontologies, Proteins 2016-06-14
BioSamples Database RDF: webinar

BioSamples Database RDF: webinar from http://www.ebi.ac.uk/training/online/course/biosamples-database-rdf-webinar.

Keywords: DNA RNA, Gene Expression, Ontologies, Proteins

BioSamples Database RDF: webinar https://tess.elixir-europe.org/materials/biosamples-database-rdf-webinar BioSamples Database RDF: webinar from http://www.ebi.ac.uk/training/online/course/biosamples-database-rdf-webinar. DNA RNA, Gene Expression, Ontologies, Proteins 2016-06-14
ChIP-Seq

No description available

Keywords: ChIP-Seq, Experimental-design, QC, ChIP-Seq-QC, Data-format, Alignment, Peak-calling, Differential-binding, Annotation

ChIP-Seq https://tess.elixir-europe.org/materials/chip-seq No description available ChIP-Seq, Experimental-design, QC, ChIP-Seq-QC, Data-format, Alignment, Peak-calling, Differential-binding, Annotation