FAIR data - Module 4 (share and publish data)
Partager et diffuser les données. Le cadre juridique, les entrepôts et les licences sur les données
Scientific topics: Data management, Biology, Bioinformatics
Keywords: data sharing, Data publishing, legal framework, data warehouse, licensing, data reuse
Resource type: Slides
FAIR data - Module 4 (share and publish data)
https://ifb-elixirfr.github.io/IFB-FAIR-data-training/modules/module4.html
https://tess.elixir-europe.org/materials/fair-data-module-4-share-and-publish-data
Partager et diffuser les données. Le cadre juridique, les entrepôts et les licences sur les données
Frédéric de Lamotte
Paulette Lieby
Lionel Maurel
Hélène Chiapello
Thomas Denecker
Jean-François Dufayard
Gautier Sarah
Julien Seiler
Data management
Biology
Bioinformatics
data sharing, Data publishing, legal framework, data warehouse, licensing, data reuse
Biologists
bioinformaticians
Biomedical researchers
FAIR data - Module 1 (research data)
Research data and their centrality in the research process.
This material is mostly in French.
Keywords: metadata, Data Life Cycle, Reproducibility, Data management plan
Resource type: Slides
FAIR data - Module 1 (research data)
https://ifb-elixirfr.github.io/IFB-FAIR-data-training/modules/module1.html
https://tess.elixir-europe.org/materials/fair-data-module-1
Research data and their centrality in the research process.
This material is mostly in French.
Frédéric de Lamotte
Gautier Sarah
Hélène Chiapello
Jean-François Dufayard
Julien Seiler
Lionel Maurel
Paulette Lieby
Thomas Denecker
metadata, Data Life Cycle, Reproducibility, Data management plan
Biologists
bioinformaticians
Biomedical researchers
IFB Shiny training
Shiny package training (in french)
Keywords: R-programming, Reproducible Science
IFB Shiny training
https://ifb-elixirfr.github.io/IFB_Shiny_training/
https://tess.elixir-europe.org/materials/ifb-shiny-training
Shiny package training (in french)
Frederic Schütz
Cédric Midoux
Christophe Malabat
Hélène Chiapello
Jacques van Helden
R-programming, Reproducible Science
bioinformaticians
statisticians
FAIR principles applied to bioinformatics
Content of the training material:
- Introduction to reproducibility
- encapsulate a work environment (docker)
- design and execute workflows (snakemake)
- IFB infrastructure (Slurm cluster)
- managing software versions (git)
- managing software environments (conda)
- ensure...
Keywords: FAIR, Reproducible Science, Open science, Data analysis, Data processing
Resource type: Training materials
FAIR principles applied to bioinformatics
https://github.com/IFB-ElixirFr/IFB-FAIR-bioinfo-training
https://tess.elixir-europe.org/materials/fair-principles-applied-to-bioinformatics
Content of the training material:
- Introduction to reproducibility
- encapsulate a work environment (docker)
- design and execute workflows (snakemake)
- IFB infrastructure (Slurm cluster)
- managing software versions (git)
- managing software environments (conda)
- ensure the traceability of analysis using Notebooks.
The training material is in french
Thomas Denecker
Claire Toffano-Nioche
Céline Hernandez
Julien Seiler
Gildas Le Corguillé
Hélène Chiapello
FAIR, Reproducible Science, Open science, Data analysis, Data processing
bioinformaticians
software developers, bioinformaticians
computational scientists
Researchers
Implementation of Data Management Plans & Data Stewardship in practice
Materials from the ELIXIR workshop “Implementation of Data Management Plans & Data Stewardship in practice”, Sept 11, 2018 at ECCB2018, Athens, Greece.
Scientific topics: Data submission, annotation, and curation, Data management
Keywords: data management, data stewardship, eLearning, EeLP
Resource type: course materials, Training materials, Slides
Implementation of Data Management Plans & Data Stewardship in practice
https://elixir.mf.uni-lj.si/course/view.php?id=40
https://tess.elixir-europe.org/materials/implementation-of-data-management-plans-data-stewardship-in-practice
Materials from the ELIXIR workshop “Implementation of Data Management Plans & Data Stewardship in practice”, Sept 11, 2018 at ECCB2018, Athens, Greece.
Celia van Gelder
Mateusz Kuzak
Roland Krause
Marko Vidak
Celia van Gelder
Roland Krause
Mateusz Kuzak
Brane Leskosek
Marko Vidak
Robert Pergl
Marek Suchanek
Jan Slifka
Vojtech Knaisl
Data submission, annotation, and curation
Data management
data management, data stewardship, eLearning, EeLP
bioinformaticians
data stewards