Register training material
8 materials found

Contributors: Prof. Tom Freeman  or Emily Angiolini  or Prof. Michael J E Sternberg  or Chris Evelo  or Derek Wright 


A network biology workflow to study transcriptomics data of the diabetic liver

Description of a network biology workflow for pathway and network analysis methods to study the rewiring of the diabetic liver.

Keywords: Biological networks, Network Visualization

A network biology workflow to study transcriptomics data of the diabetic liver https://tess.elixir-europe.org/materials/a-network-biology-workflow-to-study-transcriptomics-data-of-the-diabetic-liver Description of a network biology workflow for pathway and network analysis methods to study the rewiring of the diabetic liver. Susan Coort Martina Kutmon Chris Evelo Biological networks, Network Visualization
Train the trainer

Train the Trainer course materials

Scientific topics: Bioinformatics, Computational biology

Keywords: training, pedagogy

Train the trainer https://tess.elixir-europe.org/materials/train-the-trainer Train the Trainer course materials Emily Angiolini Jamie Edwards Paul Yorke Bioinformatics Computational biology training, pedagogy Trainers
BiVi theme: Molecular

Prof Michael Sternberg introduces bio-visualisation in the Molecular theme from a user perspective at 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting.

Keywords: Molecular

Resource type: Video

BiVi theme: Molecular https://tess.elixir-europe.org/materials/bivi-theme-molecular Prof Michael Sternberg introduces bio-visualisation in the Molecular theme from a user perspective at 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting. Prof. Michael J E Sternberg Molecular 2017-02-01
BioLayout Express 3D

Derek Wright discusses the BioLayout Express visualisation tool at 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting.

Scientific topics: Pathway or network

Keywords: Cells and Organisms, Genome, Pathway

Resource type: Video

BioLayout Express 3D https://tess.elixir-europe.org/materials/biolayout-express-3d Derek Wright discusses the BioLayout Express visualisation tool at 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting. Derek Wright Pathway or network Cells and Organisms, Genome, Pathway 2017-02-02
BiVi theme: Pathways

Prof Tom Freeman discusses bio-visualisation within the Pathway theme at 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting.

Scientific topics: Pathway or network

Keywords: Pathway

Resource type: Video

BiVi theme: Pathways https://tess.elixir-europe.org/materials/bivi-theme-pathways Prof Tom Freeman discusses bio-visualisation within the Pathway theme at 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting. Prof. Tom Freeman Pathway or network Pathway 2017-02-02
BiVi theme: Molecular - Structural molecular graphics

Prof Michael Sternberg introduces the Molecular bio-visualsation session at 2nd BiVi in 2015. Created at: 2nd BiVi Annual Meeting.

Keywords: Molecular

Resource type: Slideshow

BiVi theme: Molecular - Structural molecular graphics https://tess.elixir-europe.org/materials/bivi-theme-molecular-structural-molecular-graphics Prof Michael Sternberg introduces the Molecular bio-visualsation session at 2nd BiVi in 2015. Created at: 2nd BiVi Annual Meeting. Prof. Michael J E Sternberg Molecular 2017-02-03
EzMol and BioBlox: From Resources for Protein Modelling to Educational Computer Games

In this talk Michael Sternberg of Imperial reports how their research on protein modelling has led to the development of computer games with a role in scientific education. At Imperial, Chris Reynolds has developed a web-based molecular graphics resource EzMol which is a simple-to-use display of...

Keywords: Molecular

Resource type: Video

EzMol and BioBlox: From Resources for Protein Modelling to Educational Computer Games https://tess.elixir-europe.org/materials/ezmol-and-bioblox-from-resources-for-protein-modelling-to-educational-computer-games In this talk Michael Sternberg of Imperial reports how their research on protein modelling has led to the development of computer games with a role in scientific education. At Imperial, Chris Reynolds has developed a web-based molecular graphics resource EzMol which is a simple-to-use display of protein structures. In collaboration with Frederic Fol Leymarie, William Latham and their team at Goldsmiths, we have developed the BioBlox suite of scientific-based computer games based around protein docking. BioBox3D is a serious crowd-sourced game for predicting protein/protein docking. BioBlox2D is a fun-to-play game with scientific content for phone/tablet inspired by the recognition between proteins and small molecules. Finally, BioBloxVR is a virtual reality environment for protein docking inspired by BioBlox3D. We are exploring the opportunities for EzMol and BioBlox as educational resources. The projects were supported by the BBSRC. Created at: 3rd BiVi Annual Meeting (2017). Prof. Michael J E Sternberg Molecular 2017-05-15
Web-based Tools for Integrative Analysis of Pancreatic Cancer Data

Poster presentation at 3rd BiVi in April 2017.Presenitng a suite of web applications, developed for the PRECISION-Parc initiative, to provide integrative analyses of genomic and transcription data from patient primary samples, cell lines and xenografts, as well as clinical data on patient...

Scientific topics: Pathway or network

Keywords: Genome, Pathway

Resource type: Poster

Web-based Tools for Integrative Analysis of Pancreatic Cancer Data https://tess.elixir-europe.org/materials/web-based-tools-for-integrative-analysis-of-pancreatic-cancer-data Poster presentation at 3rd BiVi in April 2017.Presenitng a suite of web applications, developed for the PRECISION-Parc initiative, to provide integrative analyses of genomic and transcription data from patient primary samples, cell lines and xenografts, as well as clinical data on patient survival. Created at: 3rd BiVi Annual Meeting (2017). Derek Wright Pathway or network Genome, Pathway 2017-05-30