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6 materials found

Contributors: Prof. Tom Freeman  or Emily Angiolini  or Nils Peder Willassen  or Dr. Sean I O’Donoghue  or Anil S. Thanki 


Hands-on workshop in Marine Metagenomics

Materials from the ELIXIR workshop “Hands-on workshop in Marine Metagenomics”, Nov 26-30 2018 at the Arctic University of Norway, Tromso, Norway

Scientific topics: Marine biology, Metagenomics, Genomics

Keywords: Marine Metagenomics, eLearning, EeLP

Resource type: course materials, Training materials, Slides

Hands-on workshop in Marine Metagenomics https://tess.elixir-europe.org/materials/hands-on-workshop-in-marine-metagenomics Materials from the ELIXIR workshop “Hands-on workshop in Marine Metagenomics”, Nov 26-30 2018 at the Arctic University of Norway, Tromso, Norway Erik Hjerde Nils Peder Willassen Espen Aberg Espen Mikal Robertsen Marine biology Metagenomics Genomics Marine Metagenomics, eLearning, EeLP Researchers Master students PhD students
Train the trainer

Train the Trainer course materials

Scientific topics: Bioinformatics, Computational biology

Keywords: training, pedagogy

Train the trainer https://tess.elixir-europe.org/materials/train-the-trainer Train the Trainer course materials Emily Angiolini Jamie Edwards Paul Yorke Bioinformatics Computational biology training, pedagogy Trainers
Visualizing Protein Structures and Features

Sean O'Donoghue (http://odonoghuelab.org) talks about molecular spatial data and the emerging issue of sequence-structure gap mainly due to experimental difficulties in obtaining reliable (or any) structure information for a given protein. In his talk, he also gives a brief demonstration of...

Keywords: Molecular

Resource type: Video

Visualizing Protein Structures and Features https://tess.elixir-europe.org/materials/visualizing-protein-structures-and-features Sean O'Donoghue (http://odonoghuelab.org) talks about molecular spatial data and the emerging issue of sequence-structure gap mainly due to experimental difficulties in obtaining reliable (or any) structure information for a given protein. In his talk, he also gives a brief demonstration of Aquaria (http://aquaria.ws), a web-based 3D molecular structure visualization tool that combines data from various databases and allows investigators to easily view and explore proteins and protein-protein interactions.This talk was presented at VIZBI 2013, an international conference series on visualizing biological data (http://vizbi.org). This video was filmed and distributed with permission under a Creative Commons license. Created at: VIZBI 2013. Dr. Sean I O’Donoghue Molecular 2017-01-31
Genomic Visualisations at TGAC

Anil S Thanki presents two visulaisation tools: TGAC Browser and Aequatus as 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting.

Keywords: Genome

Resource type: Video

Genomic Visualisations at TGAC https://tess.elixir-europe.org/materials/genomic-visualisations-at-tgac Anil S Thanki presents two visulaisation tools: TGAC Browser and Aequatus as 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting. Anil S. Thanki Genome 2017-02-02
BiVi theme: Pathways

Prof Tom Freeman discusses bio-visualisation within the Pathway theme at 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting.

Scientific topics: Pathway or network

Keywords: Pathway

Resource type: Video

BiVi theme: Pathways https://tess.elixir-europe.org/materials/bivi-theme-pathways Prof Tom Freeman discusses bio-visualisation within the Pathway theme at 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting. Prof. Tom Freeman Pathway or network Pathway 2017-02-02
Aequatus-vis

Anil Thanki describes the Aequatus-vis JavaScript plugin to visualise homologous genes through alignment and phylogeny information at 2nd BiVi in 2015. aequatus-vis preserves teh interactive functionality of Aequatus, an open-source web based tool to visualise homologous genes with phylogenetic...

Scientific topics: Phylogenetics

Keywords: Genome, Phylogenetics

Resource type: Slideshow

Aequatus-vis https://tess.elixir-europe.org/materials/aequatus-vis Anil Thanki describes the Aequatus-vis JavaScript plugin to visualise homologous genes through alignment and phylogeny information at 2nd BiVi in 2015. aequatus-vis preserves teh interactive functionality of Aequatus, an open-source web based tool to visualise homologous genes with phylogenetic tree . Created at: 2nd BiVi Annual Meeting. Anil S. Thanki Phylogenetics Genome, Phylogenetics 2017-02-03