Register training material
10 materials found

Contributors: Michael Ball  or Vicky Schneider  or Sandra Orchard  or Anil S. Thanki  or Jaime Morris 


MATHEMATICS BOOT CAMP: Introduction to Complex Systems Tools

This repository contains didactic material used in an introductory course of mathematics at the Center for Complex Systems and Brain Sciences in Florida Atlantic University by Viktor K. Jirsa.

Scientific topics: Computational biology, Mathematics

Keywords: ComputationalBiology, Neuroscience, complex systems, Mathematics

Resource type: Notes, Scripts

MATHEMATICS BOOT CAMP: Introduction to Complex Systems Tools https://tess.elixir-europe.org/materials/mathematics-boot-camp-introduction-to-complex-systems-tools This repository contains didactic material used in an introductory course of mathematics at the Center for Complex Systems and Brain Sciences in Florida Atlantic University by Viktor K. Jirsa. Felix Almonte Collins Assisi Frederick Carver Gautam Vallabha Jaime Morris Ajay Pillai Armin Fuchs Computational biology Mathematics ComputationalBiology, Neuroscience, complex systems, Mathematics Undergraduate students
BBSRC: Data and Data Visualisation

Michael Ball from BBSRC's closing remarks on Data and Data Visualisation from 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting.

Scientific topics: Phylogenetics, Pathway or network

Keywords: Anatomy Physiology and Atlases, Cells and Organisms, Genome, Molecular, Pathway, Phylogenetics, Populations, Information visualisation

Resource type: Video

BBSRC: Data and Data Visualisation https://tess.elixir-europe.org/materials/bbsrc-data-and-data-visualisation Michael Ball from BBSRC's closing remarks on Data and Data Visualisation from 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting. Michael Ball Phylogenetics Pathway or network Anatomy Physiology and Atlases, Cells and Organisms, Genome, Molecular, Pathway, Phylogenetics, Populations, Information visualisation 2017-02-01
Genomic Visualisations at TGAC

Anil S Thanki presents two visulaisation tools: TGAC Browser and Aequatus as 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting.

Keywords: Genome

Resource type: Video

Genomic Visualisations at TGAC https://tess.elixir-europe.org/materials/genomic-visualisations-at-tgac Anil S Thanki presents two visulaisation tools: TGAC Browser and Aequatus as 1st BiVi in 2014. Created at: 1st BiVi Annual Meeting. Anil S. Thanki Genome 2017-02-02
Aequatus-vis

Anil Thanki describes the Aequatus-vis JavaScript plugin to visualise homologous genes through alignment and phylogeny information at 2nd BiVi in 2015. aequatus-vis preserves teh interactive functionality of Aequatus, an open-source web based tool to visualise homologous genes with phylogenetic...

Scientific topics: Phylogenetics

Keywords: Genome, Phylogenetics

Resource type: Slideshow

Aequatus-vis https://tess.elixir-europe.org/materials/aequatus-vis Anil Thanki describes the Aequatus-vis JavaScript plugin to visualise homologous genes through alignment and phylogeny information at 2nd BiVi in 2015. aequatus-vis preserves teh interactive functionality of Aequatus, an open-source web based tool to visualise homologous genes with phylogenetic tree . Created at: 2nd BiVi Annual Meeting. Anil S. Thanki Phylogenetics Genome, Phylogenetics 2017-02-03
NGS overview

This course covers: Sequencing technologies Applications Categories of analysis Sample preparation Potential services in NGS Appendix

Scientific topics: Sequencing, High-throughput sequencing

Keywords: bioinformatics, Australia

NGS overview https://tess.elixir-europe.org/materials/ngs-overview This course covers: Sequencing technologies Applications Categories of analysis Sample preparation Potential services in NGS Appendix Vicky Schneider Sequencing High-throughput sequencing bioinformatics, Australia Biologists
Python Overview

Introduction to Python

Keywords: bioinformatics, Australia

Python Overview https://tess.elixir-europe.org/materials/python-overview Introduction to Python Vicky Schneider bioinformatics, Australia Biologists
Galaxy workflows

This workshop/tutorial will familiarise you with the Galaxy workflow engine. It will cover the following topics: Logging in to the server How to construct and use a workflow by various methods How to share a workflow

Scientific topics: Workflows

Keywords: bioinformatics

Galaxy workflows https://tess.elixir-europe.org/materials/galaxy-workflows This workshop/tutorial will familiarise you with the Galaxy workflow engine. It will cover the following topics: Logging in to the server How to construct and use a workflow by various methods How to share a workflow Vicky Schneider Workflows bioinformatics Biologists
What is GenomeSpace?

GenomeSpace is a cloud-based interoperability framework to support integrative genomics analysis through an easy-to-use Web interface. GenomeSpace provides access to a diverse range of bioinformatics tools, and bridges the gaps between the tools, making it easy to leverage the available analyses...

Keywords: bioinformatics, GVL

What is GenomeSpace? https://tess.elixir-europe.org/materials/what-is-genomespace GenomeSpace is a cloud-based interoperability framework to support integrative genomics analysis through an easy-to-use Web interface. GenomeSpace provides access to a diverse range of bioinformatics tools, and bridges the gaps between the tools, making it easy to leverage the available analyses and visualizations in each of them. The tools retain their native look and feel, with GenomeSpace providing frictionless conduits between them through a lightweight interoperability layer. Vicky Schneider bioinformatics, GVL Biologists
Introduction to Galaxy

Basic Introduction to Galaxy

Keywords: bioinformatics

Introduction to Galaxy https://tess.elixir-europe.org/materials/introduction-to-galaxy Basic Introduction to Galaxy Vicky Schneider bioinformatics Biologists
EMBL-ABR Best Practice workshop series: the data life-cycle

From 24-28 October 2016, the EMBL-ABR Hub ran a week-long Best Practice workshop series focussing on the Data Life Cycle for biological and bioinformatics data. International and local faculty members joined highly engaged participants from around Australia: students, postdocs, lecturers, other...

Scientific topics: Data types and objects, Data management

Keywords: bioinformatics, data

EMBL-ABR Best Practice workshop series: the data life-cycle https://tess.elixir-europe.org/materials/embl-abr-best-practice-workshop-series-the-data-life-cycle From 24-28 October 2016, the EMBL-ABR Hub ran a week-long Best Practice workshop series focussing on the Data Life Cycle for biological and bioinformatics data. International and local faculty members joined highly engaged participants from around Australia: students, postdocs, lecturers, other scientists, research assistants and research data managers. Jyoti Khadake Sandra Orchard Dan Bolser Suzanna Lewis Data types and objects Data management bioinformatics, data Biologists bioinformaticians