RRegrs package
This tutorial explains how to use a collection of R regression tools for estimating the optimal model via a fully validated procedure.
Keywords: Regression Models
RRegrs package
https://enanomapper.github.io/tutorials/RRegrs/RRegrs.html
https://tess.elixir-europe.org/materials/rregrs-package
This tutorial explains how to use a collection of R regression tools for estimating the optimal model via a fully validated procedure.
Regression Models
PhD students
post-docs
How to use the AffyQC web tool of ArrayAnalysis.org for quality control and pre-processing of Affymetrix microarray data
This tutorial explains how to use the AffyQC web tool of ArrayAnalysis.org for quality control and pre-processing of Affymetrix microarray data.
Keywords: Microarray data analysis, Quality control and data pre-processing, Affymetrix microarrays, Systems biology, Pathway and network analyis
How to use the AffyQC web tool of ArrayAnalysis.org for quality control and pre-processing of Affymetrix microarray data
https://enanomapper.github.io/tutorials/QCandpreprocessing/QCandpreprocessing.html
https://tess.elixir-europe.org/materials/how-to-use-the-affyqc-web-tool-of-arrayanalysis-org-for-quality-control-and-pre-processing-of-affymetrix-microarray-data
This tutorial explains how to use the AffyQC web tool of ArrayAnalysis.org for quality control and pre-processing of Affymetrix microarray data.
Microarray data analysis, Quality control and data pre-processing, Affymetrix microarrays, Systems biology, Pathway and network analyis
PhD students
post-docs
How to use the statistics module of ArrayAnalysis.org for statistics analysis of microarray data
This tutorial how to statistically analyze microarray data with ArrayAnalysis.org website.
Keywords: ArrayAnalysis.org, microarray
How to use the statistics module of ArrayAnalysis.org for statistics analysis of microarray data
https://enanomapper.github.io/tutorials/Statistics/readme.html
https://tess.elixir-europe.org/materials/how-to-use-the-statistics-module-of-arrayanalysis-org-for-statistics-analysis-of-microarray-data
This tutorial how to statistically analyze microarray data with ArrayAnalysis.org website.
Anwesha Bohler
Egon Willighagen
Friederike Ehrhart
Lars Eijssen
Linda Rieswijk
Penny Nymark
ArrayAnalysis.org, microarray
post-docs
How to make a new pathway for WikiPathways using PathVisio
This tutorial explains how to a new pathway for WikiPathways using PathVisio.
Keywords: Systems biology, Pathway analysis, Network analysis, Microarray data analysis, Nanomaterials
How to make a new pathway for WikiPathways using PathVisio
https://enanomapper.github.io/tutorials/Pathway/Pathway.html
https://tess.elixir-europe.org/materials/how-to-make-a-new-pathway-for-wikipathways-using-pathvisio
This tutorial explains how to a new pathway for WikiPathways using PathVisio.
Systems biology, Pathway analysis, Network analysis, Microarray data analysis, Nanomaterials
PhD students
post-docs
Omics descriptors calculation R package
This tutorial explains how to generate a new set of GO descriptors using two novel created R packages.
Omics descriptors calculation R package
https://enanomapper.github.io/tutorials/Omics%20descriptors%20calculation/Omics%20descriptors%20calculation%20R%20package.html
https://tess.elixir-europe.org/materials/omics-descriptors-calculation-r-package
This tutorial explains how to generate a new set of GO descriptors using two novel created R packages.
Gene Ontology
PhD students
post-docs
Pathway module of ArrayAnalysis.org
This tutorial explains how to use the Pathway module of ArrayAnalysis.org for pathway analysis of microarray data.
Pathway module of ArrayAnalysis.org
https://enanomapper.github.io/tutorials/Pathway_analysis/Pathway%20analysis.html
https://tess.elixir-europe.org/materials/pathway-module-of-arrayanalysis-org
This tutorial explains how to use the Pathway module of ArrayAnalysis.org for pathway analysis of microarray data.
Gene Ontology
PhD students
post-docs
Entering and analysing nano safety data
Tutorial that covers various aspects of working with the eNanoMapper database. It discussed searching, adding, and downloading data from an eNanoMapper database.
Keywords: ontologies, enanomapper
Entering and analysing nano safety data
https://enanomapper.github.io/tutorials/Entering_and_analysing_nano_safety_data/readme.html
https://tess.elixir-europe.org/materials/entering-and-analysing-nano-safety-data
Tutorial that covers various aspects of working with the eNanoMapper database. It discussed searching, adding, and downloading data from an eNanoMapper database.
Egon Willighagen
Nina Jeliazkova
ontologies, enanomapper
Bioinformatician
PhD students
post-docs
Adding ontology terms
This tutorial describes how terms can be added to the eNanoMapper ontology.
Keywords: ontologies, enanomapper
Adding ontology terms
https://enanomapper.github.io/tutorials/Added%20ontology%20terms/README.html
https://tess.elixir-europe.org/materials/adding-ontology-terms
This tutorial describes how terms can be added to the eNanoMapper ontology.
Egon Willighagen
ontologies, enanomapper
post-docs
Browsing the eNanoMapper ontology with BioPortal, AberOWL and Protégé
This tutorial explains how the eNanoMapper ontology can be browsed with three tools, of which two are online.
Keywords: nanotoxicology, Ontologies, BioPortal, AberOWL, Protégé
Resource type: Tutorial
Browsing the eNanoMapper ontology with BioPortal, AberOWL and Protégé
https://enanomapper.github.io/tutorials/BrowseOntology/Tutorial%20browsing%20eNM%20ontology.html
https://tess.elixir-europe.org/materials/browsing-the-enanomapper-ontology-with-bioportal-aberowl-and-protege
This tutorial explains how the eNanoMapper ontology can be browsed with three tools, of which two are online.
Egon Willighagen
Friederike Ehrhart
Linda Rieswijk
nanotoxicology, Ontologies, BioPortal, AberOWL, Protégé
PhD students
post-docs
