9 materials found

Content provider: EMBL-ABR 


NGS overview

This course covers: Sequencing technologies Applications Categories of analysis Sample preparation Potential services in NGS Appendix

Scientific topics: Sequencing, High-throughput sequencing

Keywords: bioinformatics, Australia

NGS overview https://tess.elixir-europe.org/materials/ngs-overview This course covers: Sequencing technologies Applications Categories of analysis Sample preparation Potential services in NGS Appendix Vicky Schneider Sequencing High-throughput sequencing bioinformatics, Australia Biologists
Python Overview

Introduction to Python

Keywords: bioinformatics, Australia

Python Overview https://tess.elixir-europe.org/materials/python-overview Introduction to Python Vicky Schneider bioinformatics, Australia Biologists
Galaxy workflows

This workshop/tutorial will familiarise you with the Galaxy workflow engine. It will cover the following topics: Logging in to the server How to construct and use a workflow by various methods How to share a workflow

Scientific topics: Workflows

Keywords: bioinformatics

Galaxy workflows https://tess.elixir-europe.org/materials/galaxy-workflows This workshop/tutorial will familiarise you with the Galaxy workflow engine. It will cover the following topics: Logging in to the server How to construct and use a workflow by various methods How to share a workflow Vicky Schneider Workflows bioinformatics Biologists
What is GenomeSpace?

GenomeSpace is a cloud-based interoperability framework to support integrative genomics analysis through an easy-to-use Web interface. GenomeSpace provides access to a diverse range of bioinformatics tools, and bridges the gaps between the tools, making it easy to leverage the available analyses...

Keywords: bioinformatics, GVL

What is GenomeSpace? https://tess.elixir-europe.org/materials/what-is-genomespace GenomeSpace is a cloud-based interoperability framework to support integrative genomics analysis through an easy-to-use Web interface. GenomeSpace provides access to a diverse range of bioinformatics tools, and bridges the gaps between the tools, making it easy to leverage the available analyses and visualizations in each of them. The tools retain their native look and feel, with GenomeSpace providing frictionless conduits between them through a lightweight interoperability layer. Vicky Schneider bioinformatics, GVL Biologists
Introduction to Galaxy

Basic Introduction to Galaxy

Keywords: bioinformatics

Introduction to Galaxy https://tess.elixir-europe.org/materials/introduction-to-galaxy Basic Introduction to Galaxy Vicky Schneider bioinformatics Biologists
Researcher Training Day for Life Scientists_ Rad-seq with Stacks in Galaxy

This materials are associated to the Galaxy Australasia Meeting 2017 kicks off on Friday 3rd February with the Researcher Training Day. This event targets life scientists working with Next-Generation Sequencing data, in particular RNA-Seq, RAD-Seq, and microbial genomes.

Keywords: bioinformatics

Researcher Training Day for Life Scientists_ Rad-seq with Stacks in Galaxy https://tess.elixir-europe.org/materials/researcher-training-day-for-life-scientists_-rad-seq-with-stacks-in-galaxy This materials are associated to the Galaxy Australasia Meeting 2017 kicks off on Friday 3rd February with the Researcher Training Day. This event targets life scientists working with Next-Generation Sequencing data, in particular RNA-Seq, RAD-Seq, and microbial genomes. Pip Griffin Sonika Tyagi bioinformatics Biologists
EMBL-ABR workshop on Open Source and Software Development Best Practice

This workshop will provide an interactive forum to discuss, review and gain an overview of Open Source and Software Development and will be based on content from the ELIXIR Software Development Best Practices group and aims to explore how to harmonise EMBL-ABR efforts in this area

Scientific topics: Software engineering

Keywords: bioinformatics

EMBL-ABR workshop on Open Source and Software Development Best Practice https://tess.elixir-europe.org/materials/embl-abr-workshop-on-open-source-and-software-development-best-practice This workshop will provide an interactive forum to discuss, review and gain an overview of Open Source and Software Development and will be based on content from the ELIXIR Software Development Best Practices group and aims to explore how to harmonise EMBL-ABR efforts in this area Rafael C Jimenez Jason Williams Software engineering bioinformatics software developers, bioinformaticians
EMBL-ABR/ELIXIR/CyVerse workshop: Registries in Bioinformatics

This workshop will provide an introduction to existing solutions and methods for registries across a variety of areas relevant to bioinformatics, such as tools, datasets, standards, events and training.

Keywords: bioinformatics

EMBL-ABR/ELIXIR/CyVerse workshop: Registries in Bioinformatics https://tess.elixir-europe.org/materials/embl-abr-elixir-cyverse-workshop-registries-in-bioinformatics This workshop will provide an introduction to existing solutions and methods for registries across a variety of areas relevant to bioinformatics, such as tools, datasets, standards, events and training. Rafael C Jimenez Jason Williams Sonika Tyagi bioinformatics bioinformaticians
EMBL-ABR Best Practice workshop series: the data life-cycle

From 24-28 October 2016, the EMBL-ABR Hub ran a week-long Best Practice workshop series focussing on the Data Life Cycle for biological and bioinformatics data. International and local faculty members joined highly engaged participants from around Australia: students, postdocs, lecturers, other...

Scientific topics: Data types and objects, Data management

Keywords: bioinformatics, data

EMBL-ABR Best Practice workshop series: the data life-cycle https://tess.elixir-europe.org/materials/embl-abr-best-practice-workshop-series-the-data-life-cycle From 24-28 October 2016, the EMBL-ABR Hub ran a week-long Best Practice workshop series focussing on the Data Life Cycle for biological and bioinformatics data. International and local faculty members joined highly engaged participants from around Australia: students, postdocs, lecturers, other scientists, research assistants and research data managers. Jyoti Khadake Sandra Orchard Dan Bolser Suzanna Lewis Data types and objects Data management bioinformatics, data Biologists bioinformaticians