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5 materials found

Content provider: ELIXIR 

FAIRify your data: data documentation and metadata

“Documentation is a love letter that you write to your future self.”
Damian Conway (2005)

Make your data as useful as possible for “your future self” and others
Never forget what you did or how or why you did it
Always find beck your precious data (easily)
Make data understandable,...

Scientific topics: Data management

Keywords: data documentation, metadata

Resource type: Presentation

The Turing Way

The Turing Way is a lightly opinionated guide to reproducible data science.

Our goal is to provide all the information that researchers need at the start of their projects to ensure that they are easy to reproduce at the end.

This also means making sure PhD students, postdocs, PIs, and...

Keywords: Data Science, Reproducibility, Version control, Reproducible Environment, Continuous integration

Resource type: e-learning


This set of course material was designed in the context of the ELIXIR EXCELERATE Train the Trainer programme. It covers four sessions:

  • Learning principles and how they apply to training and teaching
  • Teaching techniques that can be used to enhance learner engagement and participation *...

Keywords: Train the trainer, Pedagogy, Course development, Course design

Resource type: Training materials

PacBio de novo genome assembly - Hands on exercise

  • Produce an assembled genomes from read file(s).
  • Produce genomes with : --– the awaited length, – few errors (INDELs).
  • Use different software packages to produce the genomes.
  • Understand the command line structure and some of the parameters used by the assemblers.
  • Polish the genome...

Resource type: PDF

Genome assembly with long reads

  • News
  • PacBio read production and error patterns
  • Nanopore read production and error patterns
  • Assembly strategies
  • Assembly results
  • Conclusions

Resource type: PDF