Bioinformatics and Virtual Machines
We introduce the concept of the virtual machine, what they can be used for and the advantages and disadvantages of using them.
Keywords: VM, IFR, Institute of Food Research, Quadram Institute, Bioinformatics
Bioinformatics and Virtual Machines
http://moodle.ifr.ac.uk/moodle/course/view.php?id=5
https://tess.elixir-europe.org/materials/bioinformatics-and-virtual-machines
We introduce the concept of the virtual machine, what they can be used for and the advantages and disadvantages of using them.
Mark Fernandes
VM, IFR, Institute of Food Research, Quadram Institute, Bioinformatics
LXDE RStudio with support for bioconductor tools
An LXDE Rstudio with pre-loaded Bioconductor tools for rna-seq DE analysis & visualisation
Keywords: RNA-Seq, IFR, Institute of Food Research, Quadram Institute
LXDE RStudio with support for bioconductor tools
https://hub.docker.com/r/foodresearch/ifr_rstudio_bioc/
https://tess.elixir-europe.org/materials/lxde-rstudio-with-support-for-bioconductor-tools
An LXDE Rstudio with pre-loaded Bioconductor tools for rna-seq DE analysis & visualisation
Mark Fernandes
RNA-Seq, IFR, Institute of Food Research, Quadram Institute
IFR Dockerised version of the EBI's Introduction to RNA-seq course
This is basically the EBI RNA-seq course bundled up in a Docker container using LXDE via TightVNC to provide a graphical environment. The material has been repackaged to use an Ipython Notebook as the learning environment which can be annotated by the learner.
Keywords: RNA-Seq, IFR, Institute of Food Research, Quadram Institute
IFR Dockerised version of the EBI's Introduction to RNA-seq course
https://hub.docker.com/r/foodresearch/ifr_rnaseq_course/
https://tess.elixir-europe.org/materials/ifr-dockerised-version-of-the-ebi-s-introduction-to-rna-seq-course
This is basically the EBI RNA-seq course bundled up in a Docker container using LXDE via TightVNC to provide a graphical environment. The material has been repackaged to use an Ipython Notebook as the learning environment which can be annotated by the learner.
Mark Fernandes
RNA-Seq, IFR, Institute of Food Research, Quadram Institute
Docker version of Welsh Gene Park NGS course
Docker version of Welsh Gene Park NGS course
Keywords: NGS, IFR, Institute of Food Research, Quadram Institute
Docker version of Welsh Gene Park NGS course
https://hub.docker.com/r/foodresearch/ngs_intro/
https://tess.elixir-europe.org/materials/docker-version-of-welsh-gene-park-ngs-course
Docker version of Welsh Gene Park NGS course
Mark Fernandes
Welsh Gene Park
NGS, IFR, Institute of Food Research, Quadram Institute
IFR Dockerised version of the Welsh Genepark's Introduction to Command-line NGS Analysis
The IFR Dockerised version of the Welsh Genepark's
Introduction to Command-line NGS Analysis course
Keywords: NGS, Command line, IFR, Institute of Food Research, Quadram Institute
IFR Dockerised version of the Welsh Genepark's Introduction to Command-line NGS Analysis
https://hub.docker.com/r/foodresearch/bppc/
https://tess.elixir-europe.org/materials/ifr-dockerised-version-of-the-welsh-genepark-s-introduction-to-command-line-ngs-analysis
The IFR Dockerised version of the Welsh Genepark's
Introduction to Command-line NGS Analysis course
Mark Fernandes
Welsh Gene Park
NGS, Command line, IFR, Institute of Food Research, Quadram Institute
