Using the Norwegian e-infrastructure for Life Science and usegalaxy.no
Online course on using the Norwegian e-infrastructure for Life Science (NeLS) and the national supported Galaxy (usegalaxy.no). The course will consist of lessons covering the necessary topics alternating with hands-on sessions to gain practical experience.
Keywords: NeLS, Data storage, data sharing, Data analysis
Using the Norwegian e-infrastructure for Life Science and usegalaxy.no
https://elixir.mf.uni-lj.si/enrol/index.php?id=59
https://tess.elixir-europe.org/materials/using-the-norwegian-e-infrastructure-for-life-science-and-usegalaxy-no
Online course on using the Norwegian e-infrastructure for Life Science (NeLS) and the national supported Galaxy (usegalaxy.no). The course will consist of lessons covering the necessary topics alternating with hands-on sessions to gain practical experience.
Erik Hjerde
NeLS, Data storage, data sharing, Data analysis
PhD
postdocs
Researchers
Data Management Planning workshop for new Life Science Projects
Slides from Data Management Planning online workshop for Life Science Projects for researchers
Scientific topics: Data management
Operations: Data retrieval, Data handling, Deposition
Keywords: data management plan, NeLS, TSD, metadata, sensitive, data publication, data protection, storage, identifiers, DMP, licensing, Compliance, data life cycle - collect, data life cycle - reuse, data life cycle - analyse, data life cycle - process, data life cycle - preserve, data life cycle - share, data life cycle - plan
Resource type: Slides
Data Management Planning workshop for new Life Science Projects
https://doi.org/10.5281/zenodo.4971754
https://tess.elixir-europe.org/materials/data-management-planning-workshop-for-new-life-science-projects
Slides from Data Management Planning online workshop for Life Science Projects for researchers
Erik Hjerde
Marta Eide
Korbinian Bösl
Jenny Ostrop
Ingrid Heggland
Solveig Fossum-Raunehaug
Agata Bochynska
Lars Figenschou
Nazeefa Fatima
Espen Åberg
Eivind Coward
Federico Bianchini
Data management
data management plan, NeLS, TSD, metadata, sensitive, data publication, data protection, storage, identifiers, DMP, licensing, Compliance, data life cycle - collect, data life cycle - reuse, data life cycle - analyse, data life cycle - process, data life cycle - preserve, data life cycle - share, data life cycle - plan
Professor
PhD candidate
Postdoctoral researcher
Researcher
data steward / data manager
data manager
Senior scientist/ Principal investigator
Life sciences
Hands-on workshop in Marine Metagenomics
Materials from the ELIXIR workshop “Hands-on workshop in Marine Metagenomics”, Nov 26-30 2018 at the Arctic University of Norway, Tromso, Norway
Scientific topics: Marine biology, Metagenomics, Genomics
Keywords: Marine Metagenomics, eLearning, EeLP
Resource type: course materials, Training materials, Slides
Hands-on workshop in Marine Metagenomics
https://elixir.mf.uni-lj.si/course/view.php?id=43
https://tess.elixir-europe.org/materials/hands-on-workshop-in-marine-metagenomics
Materials from the ELIXIR workshop “Hands-on workshop in Marine Metagenomics”, Nov 26-30 2018 at the Arctic University of Norway, Tromso, Norway
Erik Hjerde
Nils Peder Willassen
Espen Aberg
Espen Mikal Robertsen
Erik Hjerde
Nils Peder Willassen
Espen Aberg
Espen Mikal Robertsen
Marine biology
Metagenomics
Genomics
Marine Metagenomics, eLearning, EeLP
Researchers
Master students
PhD students
Metagenomics data analysis
This course covers metagenomics analysis from quality control, filtering and assembly to taxonomic classification, functional assignment and comparative metagenomics. In addition to covering the analysis of whole genome shotgun sequencing data, the course has also module on community analysis of...
Scientific topics: Metagenomics
Resource type: Video, course materials
Metagenomics data analysis
https://www.csc.fi/web/training/-/metagenomics
https://tess.elixir-europe.org/materials/metagenomics-data-analysis
This course covers metagenomics analysis from quality control, filtering and assembly to taxonomic classification, functional assignment and comparative metagenomics. In addition to covering the analysis of whole genome shotgun sequencing data, the course has also module on community analysis of amplicon sequencing data (16S rRNA). Finally, international databases and standards for storing the data are introduced. The course material includes slides, exercises and lecture videos.
The workshop is organized in collaboration with the ELIXIR EXCELERATE project and PRACE, and it is part of the PRACE Advanced Training Centre activity.
Eija Korpelainen
Nils Peder Willassen
Espen Mikal Robertsen
Erik Hjerde
Rob Finn
Anu Mikkonen
Jenni Hultman
Petri Auvinen
Kimmo Mattila
Maria Lehtivaara
Jarno Tuimala
Eija Korpelainen
Metagenomics