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7 materials found

Authors: Obi Griffith  or natefoo 


Informatics for RNA-Seq Analysis 2018 Module 3-Expression and Differential Expression

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2018 Module 3-Expression and Differential Expression https://tess.elixir-europe.org/materials/informatics-for-rna-seq-analysis-2018-module-3-expression-and-differential-expression Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages. Researchers Biologists, Genomicists, Computer Scientists Graduate Students Post-Doctoral Fellows
Informatics for RNA-Seq Analysis 2017 Module 3-Expression and Differential Expression

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2017 Module 3-Expression and Differential Expression https://tess.elixir-europe.org/materials/informatics-for-rna-seq-analysis-2017-module-3-expression-and-differential-expression Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages. Researchers Graduate Students Biologists, Genomicists, Computer Scientists Post-Doctoral Fellows
High-Throughput Biology 2017 Module 9-Expression and Differential Expression

Course covers the key bioinformatics concepts and tools required to analyze DNA- and RNA- sequence reads using a reference genome.

High-Throughput Biology 2017 Module 9-Expression and Differential Expression https://tess.elixir-europe.org/materials/high-throughput-biology-2017-module-9-expression-and-differential-expression Course covers the key bioinformatics concepts and tools required to analyze DNA- and RNA- sequence reads using a reference genome. Graduate students Post-Doctoral Fellows Researchers Biologists, Genomicists, Computer Scientists
Galaxy Server administration - Connecting Galaxy to a compute cluster

Resources related to configuration and maintenance of Galaxy servers Questions of the tutorial: - How to connect Galaxy to a compute cluster? - How can I configure job dependent resources, like cores, memory for my DRM? Objectives of the tutorial: - Be familiar with the basics of installing,...

Resource type: Tutorial

Galaxy Server administration - Connecting Galaxy to a compute cluster https://tess.elixir-europe.org/materials/galaxy-server-administration-connecting-galaxy-to-a-compute-cluster Resources related to configuration and maintenance of Galaxy servers Questions of the tutorial: - How to connect Galaxy to a compute cluster? - How can I configure job dependent resources, like cores, memory for my DRM? Objectives of the tutorial: - Be familiar with the basics of installing, configuring, and using Slurm - Understand all components of the Galaxy job running stack - Understand how the `job_conf.xml` file controls Galaxy's jobs subsystem - Have a strong understanding of Galaxy job destinations - Know how to map tools to job destinations - Be able to use the dynamic job runner to make arbitrary destination mappings - Understand the job resource selector config and dynamic rule creation
Galaxy Server administration - Server Monitoring and Maintenance

Resources related to configuration and maintenance of Galaxy servers Questions of the tutorial: - How to monitor a Galaxy service? - What are the best practices to maintain a Galaxy server? Objectives of the tutorial: - Learn about different monitoring strategies. - Setup and start the...

Resource type: Tutorial

Galaxy Server administration - Server Monitoring and Maintenance https://tess.elixir-europe.org/materials/galaxy-server-administration-server-monitoring-and-maintenance Resources related to configuration and maintenance of Galaxy servers Questions of the tutorial: - How to monitor a Galaxy service? - What are the best practices to maintain a Galaxy server? Objectives of the tutorial: - Learn about different monitoring strategies. - Setup and start the Galaxy reports app.
Galaxy Server administration - User, Group and Quota managment

Resources related to configuration and maintenance of Galaxy servers Questions of the tutorial: - How does Galaxy manage users and groups? - How can I assign Quotas to specific users/groups? Objectives of the tutorial: - Learn the Galaxy user/group management and assign Quotas. - Understand...

Resource type: Slides

Galaxy Server administration - User, Group and Quota managment https://tess.elixir-europe.org/materials/galaxy-server-administration-user-group-and-quota-managment Resources related to configuration and maintenance of Galaxy servers Questions of the tutorial: - How does Galaxy manage users and groups? - How can I assign Quotas to specific users/groups? Objectives of the tutorial: - Learn the Galaxy user/group management and assign Quotas. - Understand the Role Based Access Control (RBAC) of Galaxy.
Galaxy Server administration - Deployment and Platform options

Resources related to configuration and maintenance of Galaxy servers Questions of the tutorial: - What options to deploy Galaxy do I have? - Which platforms are supported by Galaxy? - What requirements does Galaxy have? Objectives of the tutorial: - Learn about different options about Galaxy...

Resource type: Slides

Galaxy Server administration - Deployment and Platform options https://tess.elixir-europe.org/materials/galaxy-server-administration-deployment-and-platform-options Resources related to configuration and maintenance of Galaxy servers Questions of the tutorial: - What options to deploy Galaxy do I have? - Which platforms are supported by Galaxy? - What requirements does Galaxy have? Objectives of the tutorial: - Learn about different options about Galaxy deployment. - Make an educated decision about your preferred deployment model.