Target audience: Biologists
WEBINAR: Getting started with command line bioinformatics
22 June 2021
AustraliaWEBINAR: Getting started with command line bioinformatics https://www.biocommons.org.au/events/command-line https://tess.elixir-europe.org/events/webinar-getting-started-with-command-line-bioinformatics Bioinformatics skills are in demand like never before and biologists are stepping up to the challenge of learning to analyse large and ever growing datasets. Learning how to use the command line can open up many options for data analysis but getting started can be a little daunting for those without a background in computer science. Parice Brandies and Carolyn Hogg have recently put together [ten simple rules for getting started with command-line bioinformatics](https://doi.org/10.1371/journal.pcbi.1008645) to help biologists begin their computational journeys. In this webinar Parice will walk you through their hints and tips for getting started with the command line. She’ll cover topics like learning tech speak, evaluating your data and workflows, assessing computational requirements, computing options, the basics of software installation, curating and testing scripts, a bit of bash and keeping good records. The webinar will be followed by a short Q&A session. **Who the webinar is for** Aspiring bioinformaticians and command line users from a variety of biological fields. **Presenter**: Parice Brandies, School of Life and Environmental Sciences, The University of Sydney **Date/time:** 22 June 2021 - 12:00-13:00 AEST / 11:30 - 12:30 ACST / 10:00-11:00 AWST **How to join** This webinar is free to join but you must register for a place in advance. **[Register here](https://unimelb.zoom.us/webinar/register/WN_fkETrWTbQNe35O9ye9OC9Q)** 2021-06-22 12:00:00 UTC 2021-06-22 13:00:00 UTC Australian BioCommons Australia Australia Bioinformatics Australian Biocommons Melissa Burke firstname.lastname@example.org  Biologists 500 workshops_and_courses first_come_first_served Command lineBioinformaticsCoding
WEBINAR: Getting started with deep learning
21 July 2021
AustraliaWEBINAR: Getting started with deep learning https://www.biocommons.org.au/events/deep-learning-titus https://tess.elixir-europe.org/events/webinar-getting-started-with-deep-learning Are you wondering what deep learning is and how it might be useful in your research? This high level overview will introduce deep learning ‘in a nutshell’ and provide tips on which concepts and skills you will need to know to build a deep learning application. The presentation also provides pointers to various resources you can use to get started in deep learning. The webinar will be followed by a short Q&A session. **Who the webinar is for: **Complete beginners in machine learning, deep learning, or programming, who want to investigate the potential application of AI systems in their research. **Presenter**: Dr Titus Tang, Senior Deep Learning Engineer, Data Science and AI Platform, Monash University **Date/time:** 21 July 2021 - 12:00-13:00 AEST / 11:30 - 12:30 ACST / 10:00-11:00 AWST **How to join: **This webinar is free to join but you must register for a place in advance. **[Register here](https://unimelb.zoom.us/webinar/register/WN_jH3KjLZKQvatEil9PULIeA)** 2021-07-21 12:00:00 UTC 2021-07-21 13:00:00 UTC Australian BioCommons Australia Australia Australian Biocommons Melissa Burke email@example.com  Biologistsbioinformaticians 500 workshops_and_courses first_come_first_served Deep learningMachine Learning and Artificial Intelligence Course
27 September - 1 October 2021ZIDAS 2021 https://2021.zidas.org/ https://tess.elixir-europe.org/events/zidas-2021 # ZIDAS 2021: switZerland’s Image and Data Analysis School - When: 27th September-1st October 2021 - Where: Online event - **Application deadline: 2021-07-01 (23:59 CET)** - Website: [https://2021.zidas.org](https://2021.zidas.org) ## About the school: This one-week school provides a hands-on introduction to image processing and analysis, with an emphasis on biologically relevant examples. ## Lectures on - Image Formation - Denoising - Segmentation - Reproducibility & Ethics ## Hands-ons with - ImageJ/Fiji Macros - GoogleColab for Python notebooks - ZeroCostDL4Mic - Ilastik ## Further tools and topics - Each day will feature 3 parallel sessions with demos of the awesome tools developed by the BioImage Analysis community such as #QuPath, #CLIJ, #CellProfiler, #TrackMate, #FigureJ, #StarDist and more! - This year will have a strong "work on your own project" component, so you can take advantage of all our great trainers to help you work with your own data! **_Find us at [https://2021.zidas.org](https://2021.zidas.org)_** 2021-09-27 09:00:00 UTC 2021-10-01 17:00:00 UTC ETHZ, EPFL ETH ZurichEPFL Center for Experimental and Clinical Imaging Technologies Zurich (EXCITE Zurich) Life Science ResearchersBiologists workshops_and_courses registration_of_interest image processingbioinformatics
11 - 15 October 2021
Toulouse, FranceWorkflow4Experimenters https://workflow4metabolomics.org/w4e2021 https://tess.elixir-europe.org/events/workflow4experimenters-b965b444-1a71-4fd0-952a-5c41b68d50bb During this one-week course, participants will learn how to use the W4M infrastructure to analyze their own dataset. Morning sessions will be dedicated to methodology and tools. Afternoon sessions will be devoted to tutoring. 2021-10-11 12:00:00 UTC 2021-10-15 12:00:00 UTC Workflow4Metabolomics - IFB/ELIXIR-FR and MetaboHUB 180 chemin de Tournefeuille, Toulouse, France 180 chemin de Tournefeuille Toulouse Haute-Garonne France 31000 Metabolomics INRA firstname.lastname@example.org ELIXIR-FR/IFBMetaboHUBRFMFGenotoul BiologistsChemists 20 workshops_and_courses registration_of_interest GalaxyMetabolomics
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