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39 events found

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  • Metabolomics: Understanding Metabolism in the 21st Century

    8 March - 2 April 2021

    Elixir node event
    Metabolomics: Understanding Metabolism in the 21st Century https://tess.elixir-europe.org/events/metabolomics-understanding-metabolism-in-the-21st-century-80ad2e1d-0a63-4498-bed5-47217f02b095 #Course Overview Metabolomics is an emerging field that aims to measure the complement of metabolites (the metabolome) in living organisms. The metabolome represents the downstream effect of an organism’s genome and its interaction with the environment. Metabolomics has a wide application area across the medical and biological sciences. The course provides an introduction to metabolomics, describes the tools and techniques we use to study the metabolome and explains why we want to study it. By the end of the course you will understand how metabolomics can revolutionise our understanding of metabolism. This course is designed as a 4-week course and the Educators will support discussions and learning in weeks 1 to 4 responding to questions and comments. The course will remain open for 12 weeks in total; if you join the course after week 5 we encourage you to read posts / comments on the platform to aid your learning. The Educators will answer comments and questions at a lower frequency in weeks 5 to 12. #Topics Covered * Metabolism and the interaction of the metabolome with the genome, proteome and the environment * The advantages of studying the metabolome * The application of hypothesis generating studies versus the use of traditional hypothesis directed research * The use of targeted and non-targeted studies in metabolomics * An interdisciplinary approach with case-studies from clinical and environmental scientific areas * Important considerations in studying the metabolome * Experimental design and sample preparation * The application of mass spectrometry in metabolomics * An introduction to data processing and analysis * Metabolite identification 2021-03-08 09:00:00 UTC 2021-04-02 23:59:00 UTC Birmingham Metabolomics Training Centre Metabolomics University of Birmingham bmtc@contacts.bham.ac.uk [] Undergraduate studentsMasters studentsPhD studentsAnyone interested in learning about metabolomics workshops_and_courses [] Metabolomics
  • Data Management Planning workshop for Life Science Projects - Ås

    9 - 10 March 2021

    Elixir node event
    Data Management Planning workshop for Life Science Projects - Ås https://tess.elixir-europe.org/events/data-management-planning-workshop-for-life-science-projects-as We are pleased to announce the Data Management planning workshop for Life Scientists organised in Ås by ELIXIR Norway, Digital Life Norway and the NMBU Research Support Office. The intended audience are researchers (PhD candidates, Post Doctoral Fellows, Researchers, Associate Professors and Professors) that are planning to submit a grant application for a research project. Max. number of participants is 35. How-to generate a data management plan for a Life Science research project that will meet the requirements of the funding organisations? Looking forward to see you at the workshop, Solveig Fossum-Raunehaug (NMBU Research Support Office) and Korbinian Bösl (UiB/ELIXIR-Norway/Centre for Digital Life Norway) 09.03.2021 0900 - 0915 Introduction 0915 - 0945 Requirements from institutions & funding bodies NMBU H2020/ERC Research Council Norway 0945 - 1015 Information on national and local storage infrastructures NMBU Storage resources NeLS/StoreBioInfo NIRD TSD 1015 - 1030 Short break 1030 - 1230 Relevant deposition repositories/ data archives domain specific archives (ELIXIR/EMBL-EBI, NCBI) NMBU Open Research Data/Dataverse NO NIRD archive NSD 10.03.2021 0900 - 1000 Key legal requirements for research in the GDPR and Health research act Personal Data Act Health Research Act 1000 - 1015 Short break 1015 - 1045 Licensing of data, biological material and software 1045 - 1300 Hands on training and assistance to generate a data management plan Requirements: Join us online and bring your research project if you have one. You will get the opportunity to set up a data management plan for your project with help of the Data Steward Wizard tool using a structured and detailed questionnaire with references to relevant resources. Register before 2nd of March 2021 2021-03-09 09:00:00 UTC 2021-03-10 13:00:00 UTC ELIXIR Norway, Centre for Digital Life Norway and NMBU Research Support Office Data management Data security Data submission, annotation and curation Norwegian University of Life Sciences korbinian.bosl@uib.no Centre for Digital Life Norway (DLN) PhD studentsPost DocsProfessorsAll postgraduates 35 workshops_and_courses first_come_first_served DMPData management plan
  • Long-read sequence analysis - streamed

    11 - 12 March 2021

    Streamed from Bern, Switzerland

    Elixir node event
    Long-read sequence analysis - streamed https://tess.elixir-europe.org/events/long-read-and-rna This course is now full with a waiting list. Overview For the last few years, research in DNA and RNA has been dominated by short-read sequencing. Although this has revolutionized the way we answer biological questions, it has its limitations. 2021-03-11 09:00:00 UTC 2021-03-12 00:00:00 UTC SIB, Streamed from Bern, Switzerland SIB Streamed from Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • NGS bioinformatics quality control and variant annotation for cancer diagnosis - streamed

    15 March 2021

    Streamed from Geneva, Switzerland

    Elixir node event
    NGS bioinformatics quality control and variant annotation for cancer diagnosis - streamed https://tess.elixir-europe.org/events/ngs-bioinformatics-quality-control-and-variant-annotation-for-cancer-diagnosis-streamed-7590fb55-85fd-4255-bcec-e7ca90e894e3 This course is organised by SIB Swiss Institute of Bioinformatics, in collaboration with the Clinical Pathology Division of the University Hospital of Geneva (HUG). 2021-03-15 09:00:00 UTC 2021-03-15 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • NGS bioinformatics quality control and variant annotation for cancer diagnosis - streamed

    15 March 2021

    Streamed from Geneva, Switzerland

    Elixir node event
    NGS bioinformatics quality control and variant annotation for cancer diagnosis - streamed https://tess.elixir-europe.org/events/ngs-bioinformatics-quality-control-and-variant-annotation-for-cancer-diagnosis-streamed-8bd19839-1f59-4180-bac8-160d55ea27cb This course is organised by SIB Swiss Institute of Bioinformatics, in collaboration with the Clinical Pathology Division of the University Hospital of Geneva (HUG). 2021-03-15 09:00:00 UTC 2021-03-15 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Best practices in High-Perfomance Computing (sciCORE cluster) - streamed

    17 March 2021

    Streamed from Basel, Switzerland

    Elixir node event
    Best practices in High-Perfomance Computing (sciCORE cluster) - streamed https://tess.elixir-europe.org/events/best-practices-in-high-perfomance-computing-scicore-cluster-streamed This course will be streamed only for the registered participants. Registered participants will receive specific information directly from the respective course’s organizers. 2021-03-17 09:00:00 UTC 2021-03-17 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps with Python in Life Sciences - streamed

    22 - 24 March 2021

    Streamed from Basel, Switzerland

    Elixir node event
    First Steps with Python in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-python-in-life-sciences-440ebe81-e125-459a-8249-c99636c80aeb This course will be streamed only for registered participants. Registered participants will receive information from the course organizer in due time. 2021-03-22 09:00:00 UTC 2021-03-24 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps with Python in Life Sciences - streamed

    22 - 24 March 2021

    Streamed from Basel, Switzerland

    Elixir node event
    First Steps with Python in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-python-in-life-sciences-streamed This course is now full with a long waiting list. 2021-03-22 09:00:00 UTC 2021-03-24 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to R Shiny

    29 March 2021

    Bern, Switzerland

    Elixir node event
    Introduction to R Shiny https://tess.elixir-europe.org/events/introduction-to-r-shiny-7c523dd5-326e-4c63-8885-097e76e33af5 Overview Shiny is an open-source R package that allows building interactive web applications from R, and without knowledge of web-development, enabling data scientists to make their data or analysis interactively explorable and accessible to 2021-03-29 09:00:00 UTC 2021-03-29 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to R Shiny - streamed

    29 March 2021

    Streamed from Lausanne, Switzerland

    Elixir node event
    Introduction to R Shiny - streamed https://tess.elixir-europe.org/events/introduction-to-r-shiny-91e31089-6657-47e5-abc3-190c0e66ffa2 This course is oversubscribed with a long waiting list. 2021-03-29 09:00:00 UTC 2021-03-29 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • NGS - Genome variant analysis - streamed

    30 - 31 March 2021

    Streamed from Bern, Switzerland

    Elixir node event
    NGS - Genome variant analysis - streamed https://tess.elixir-europe.org/events/ngs-genome-variant-analysis-65d385b7-2a1d-4b26-a539-5f7e71eacf04 This course is now full with a waiting list. This course will be streamed only for the registered participants. Registered participants will receive specific information directly from the respective course’s organizers. 2021-03-30 09:00:00 UTC 2021-03-31 00:00:00 UTC SIB, Streamed from Bern, Switzerland SIB Streamed from Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Protein sequence databases and sequence annotation at UniProtKB - streamed

    12 April 2021

    Streamed from Geneva, Switzerland

    Elixir node event
    Protein sequence databases and sequence annotation at UniProtKB - streamed https://tess.elixir-europe.org/events/protein-sequence-databases-and-sequence-annotation-at-uniprotkb-streamed This course will be streamed only for registered participants. Registered participants will receive information from the course organizer in due time. 2021-04-12 09:00:00 UTC 2021-04-12 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Protein sequence databases and sequence annotation at UniProtKB - streamed

    12 April 2021

    Streamed from Geneva, Switzerland

    Elixir node event
    Protein sequence databases and sequence annotation at UniProtKB - streamed https://tess.elixir-europe.org/events/protein-sequence-databases-and-sequence-annotation-at-uniprotkb-streamed-b2c66668-6301-46f4-b90d-8661aaeba3b5 This course will be streamed only for registered participants. Registered participants will receive information from the course organizer in due time. 2021-04-12 09:00:00 UTC 2021-04-12 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Docker and Singularity for reproducible research: getting started with containers

    13 April 2021

    Streamed from Bern, Switzerland

    Elixir node event
    Docker and Singularity for reproducible research: getting started with containers https://tess.elixir-europe.org/events/docker-and-singularity-for-reproducible-research-getting-started-with-containers This course is now full with a waiting list. Overview Reproducible analysis in bioinformatics goes beyond good documentation and sharing code. Often, analyses depend on an entire environment with many different programs, libraries and settings. 2021-04-13 09:00:00 UTC 2021-04-13 00:00:00 UTC SIB, Streamed from Bern, Switzerland SIB Streamed from Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First steps with R in Life Sciences - streamed

    15 - 16 April 2021

    Streamed from Lausanne, Switzerland

    Elixir node event
    First steps with R in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-r-in-life-sciences-207ad345-2097-436a-b1ad-35f807673310 Overview R is a complete, flexible and open source system for statistical analysis and graphics, which has become a tool of choice for biologists and biomedical scientists who need to analyse and visualise large amounts of data. 2021-04-15 09:00:00 UTC 2021-04-16 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First steps with R in Life Sciences - streamed

    15 - 16 April 2021

    Streamed from Lausanne and Basel, Switzerland

    Elixir node event
    First steps with R in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-r-in-life-sciences-streamed This course is now full with a long waiting list. 2021-04-15 09:00:00 UTC 2021-04-16 00:00:00 UTC SIB, Streamed from Lausanne and Basel, Switzerland SIB Streamed from Lausanne and Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Intermediate statistics: data analysis in practice - streamed

    21 - 22 April 2021

    Streamed from Lausanne, Switzerland

    Elixir node event
    Intermediate statistics: data analysis in practice - streamed https://tess.elixir-europe.org/events/intermediate-statistics-data-analysis-in-practice This course will be streamed only for the registered participants. Registered participants will receive specific information directly from the respective course’s organizers. 2021-04-21 09:00:00 UTC 2021-04-22 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps with UNIX in Life Sciences - streamed

    27 April 2021

    Streamed from Lausanne, Switzerland

    Elixir node event
    First Steps with UNIX in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-unix-in-life-sciences-c676cc79-09c9-4114-903f-4747ab562e6e This course will be streamed only for the registered participants. Registered participants will receive specific information directly from the respective course’s organizers. 2021-04-27 09:00:00 UTC 2021-04-27 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Galaxy introduction for life scientists

    28 - 29 April 2021

    Lausanne, Switzerland

    Galaxy introduction for life scientists https://tess.elixir-europe.org/events/galaxy-introduction-for-life-scientists-f44d2ef2-64d6-4aef-829c-749f6474e5db This course will take place in Lausanne with rules complying to COVID situation (distances and hygiene). 2021-04-28 09:00:00 UTC 2021-04-29 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] Lucille Delisle, Hans-Rudolf Hotz [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Galaxy introduction for life scientists

    28 April 2021

    Lausanne, Switzerland

    Galaxy introduction for life scientists https://tess.elixir-europe.org/events/galaxy-introduction-for-life-scientists-d6939b7d-d28b-4f21-9149-6ad453838a4c This course will take place in Lausanne with rules complying to COVID situation (distances and hygiene). 2021-04-28 09:00:00 UTC 2021-04-28 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • UNIX scripting for Life Scientists

    3 - 4 May 2021

    Lausanne, Switzerland

    Elixir node event
    UNIX scripting for Life Scientists https://tess.elixir-europe.org/events/unix-scripting-for-life-scientists-6e464e37-4b13-4d4f-bb4b-ded7d0e11136 This course will take place in Lausanne with rules complying to COVID situation (distances and hygiene). 2021-05-03 09:00:00 UTC 2021-05-04 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • UNIX scripting for Life Scientists

    3 - 4 May 2021

    Lausanne, Switzerland

    Elixir node event
    UNIX scripting for Life Scientists https://tess.elixir-europe.org/events/unix-scripting-for-life-scientists-f2bcec9a-dc55-4807-8792-1486996a4f95 This course will take place in Lausanne with rules complying to COVID situation (distances and hygiene). 2021-05-03 09:00:00 UTC 2021-05-04 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps with Python in Life Sciences

    10 - 12 May 2021

    Lausanne, Switzerland

    Elixir node event
    First Steps with Python in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-python-in-life-sciences-2cd36cd5-4588-482e-a6e8-bf14002e8287 Overview Have you ever been stuck with a file format that doesn't precisely conform to your needs, found yourself doing annoyingly repetitive data manipulations, or struggled to efficiently manage and explore your data? Python to the rescue! 2021-05-10 09:00:00 UTC 2021-05-12 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • NGS - Quality control, Alignment, Visualisation

    17 - 19 May 2021

    Bern, Switzerland

    Elixir node event
    NGS - Quality control, Alignment, Visualisation https://tess.elixir-europe.org/events/ngs-quality-control-alignment-visualisation-streamed This course will take place in Bern with rules complying to COVID situation (distances and hygiene). 2021-05-17 09:00:00 UTC 2021-05-19 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps in Parallelization with OpenMP - streamed

    20 May 2021

    Streamed from Basel, Switzerland

    Elixir node event
    First Steps in Parallelization with OpenMP - streamed https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp-5fa982ae-9a8b-462d-b71b-4e643bf5b5b2 This course is susceptible to be streamed to the registered participants, depending on the evolution of the sanitary sintuation Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. 2021-05-20 09:00:00 UTC 2021-05-20 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Intermediate Python - streamed

    27 - 28 May 2021

    Streamed from Basel, Switzerland

    Elixir node event
    Intermediate Python - streamed https://tess.elixir-europe.org/events/intermediate-python More information coming soon... 2021-05-27 09:00:00 UTC 2021-05-28 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to openBIS - streamed

    1 June 2021

    Streamed from Basel and Zurich, Switzerland

    Elixir node event
    Introduction to openBIS - streamed https://tess.elixir-europe.org/events/introduction-to-openbis-streamed Overview This course provides a general overview of openBIS, followed by a practical training session. openBIS is a combined data management platform, Electronic Laboratory Notebook, and Inventory Management System. 2021-06-01 09:00:00 UTC 2021-06-01 00:00:00 UTC SIB, Streamed from Basel and Zurich, Switzerland SIB Streamed from Basel and Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to openBIS - streamed

    1 June 2021

    Streamed from Basel and Zurich, Switzerland

    Elixir node event
    Introduction to openBIS - streamed https://tess.elixir-europe.org/events/introduction-to-openbis-streamed-2106b5cf-f4ac-452e-9371-8ddb652e916b Overview This course provides a general overview of openBIS, followed by a practical training session. openBIS is a combined data management platform, Electronic Laboratory Notebook, and Inventory Management System. 2021-06-01 09:00:00 UTC 2021-06-01 00:00:00 UTC SIB, Streamed from Basel and Zurich, Switzerland SIB Streamed from Basel and Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to Machine Learning

    7 - 8 June 2021

    Lausanne, Switzerland

    Elixir node event
    Introduction to Machine Learning https://tess.elixir-europe.org/events/introduction-to-machine-learning-with-r-a58eebd8-9b7d-4828-937e-620dcfaa2e2e More information coming soon... 2021-06-07 09:00:00 UTC 2021-06-08 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to Machine Learning

    7 - 8 June 2021

    Lausanne, Switzerland

    Elixir node event
    Introduction to Machine Learning https://tess.elixir-europe.org/events/introduction-to-machine-learning-c2bf20e9-c8c9-49ef-a8b9-59ff0bf182af More information coming soon... 2021-06-07 09:00:00 UTC 2021-06-08 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

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