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50 events found

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  • Transcriptome Analysis for Non-Model Organisms (ONLINE LIVE TRAINING)

    1 - 5 March 2021

    Cambridge, United Kingdom

    Elixir node event
    Transcriptome Analysis for Non-Model Organisms (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/transcriptome-analysis-for-non-model-organisms-online-live-training PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. RNA-Seq technology has been transformative in our ability to explore gene content and gene expression in all realms of biology, and de novo transcriptome assembly has enabled opportunities to expand transcriptome analysis to non-model organisms. This course provides an overview of modern applications of transcriptome sequencing and popular tools, and algorithms, for exploring transcript reconstruction and expression analysis in a genome-free manner. Attendees will perform quality assessment and upstream analysis of both Illumina and long reads single molecule sequencing data; the derived transcriptomes will be compared, annotated and used as reference for quantifying transcript expression, leveraging on Bioconductor tools for differential expression analysis. Additional methods will be explored for characterising the assembled transcriptome and revealing biological findings. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3803220&course-title=Transcriptome%20Analysis%20for%20Non-Model%20Organisms).'' 2021-03-01 09:30:00 UTC 2021-03-05 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR RNA-Seq Data mining Transcriptomics Data visualisation Functional genomics Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Single-cell Transcriptomics - streamed

    2 - 4 March 2021

    Streamed from Lausanne, Switzerland

    Elixir node event
    Single-cell Transcriptomics - streamed https://tess.elixir-europe.org/events/single-cell-transcriptomics-874b3216-acb9-4363-b47f-0d5b0c98629d The course is now full with a long waiting list. 2021-03-02 09:00:00 UTC 2021-03-04 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • An Introduction to Machine Learning (ONLINE LIVE TRAINING)

    8 - 10 March 2021

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Machine Learning (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/an-introduction-to-machine-learning-online-live-training-cb6fa31e-53e7-4e78-9ebb-ab470eb47192 PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. Machine learning gives computers the ability to learn without being explicitly programmed. It encompasses a broad range of approaches to data analysis with applicability across the biological sciences. Lectures will introduce commonly used algorithms and provide insight into their theoretical underpinnings. In the practicals students will apply these algorithms to real biological data-sets using the R language and environment. Please be aware that the course syllabus is currently being updated following feedback from the last event; therefore the agenda below will be subject to changes. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3732957&course-title=An%20Introduction%20to%20Machine%20Learning).'' 2021-03-08 09:30:00 UTC 2021-03-10 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Machine learning Data mining University of Cambridge Bioinformatics Training [] This is aimed at life scientists with little or no experience in machine learning and that are looking at implementing these approaches in their research.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Long-read sequence analysis - streamed

    11 - 12 March 2021

    Streamed from Bern, Switzerland

    Elixir node event
    Long-read sequence analysis - streamed https://tess.elixir-europe.org/events/long-read-and-rna This course is now full with a waiting list. Overview For the last few years, research in DNA and RNA has been dominated by short-read sequencing. Although this has revolutionized the way we answer biological questions, it has its limitations. 2021-03-11 09:00:00 UTC 2021-03-12 00:00:00 UTC SIB, Streamed from Bern, Switzerland SIB Streamed from Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to Linear Modelling with R (Online)

    12 March 2021

    Cambridge, United Kingdom

    Elixir node event
    Introduction to Linear Modelling with R (Online) https://tess.elixir-europe.org/events/introduction-to-linear-modelling-with-r-online PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. The course will cover ANOVA, linear regression and some extensions. It will be a mixture of lectures and hands-on time using RStudio to analyse data. This event is part of a series of training courses organized in collaboration with the Bioinformatics Core Facility at [CRUK Cambridge Institute](http://www.cruk.cam.ac.uk/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3730565&course-title=Introduction%20to%20Linear%20Modelling%20With%20R).'' 2021-03-12 09:45:00 UTC 2021-03-12 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • NGS bioinformatics quality control and variant annotation for cancer diagnosis - streamed

    15 March 2021

    Streamed from Geneva, Switzerland

    Elixir node event
    NGS bioinformatics quality control and variant annotation for cancer diagnosis - streamed https://tess.elixir-europe.org/events/ngs-bioinformatics-quality-control-and-variant-annotation-for-cancer-diagnosis-streamed-7590fb55-85fd-4255-bcec-e7ca90e894e3 This course is organised by SIB Swiss Institute of Bioinformatics, in collaboration with the Clinical Pathology Division of the University Hospital of Geneva (HUG). 2021-03-15 09:00:00 UTC 2021-03-15 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • NGS bioinformatics quality control and variant annotation for cancer diagnosis - streamed

    15 March 2021

    Streamed from Geneva, Switzerland

    Elixir node event
    NGS bioinformatics quality control and variant annotation for cancer diagnosis - streamed https://tess.elixir-europe.org/events/ngs-bioinformatics-quality-control-and-variant-annotation-for-cancer-diagnosis-streamed-8bd19839-1f59-4180-bac8-160d55ea27cb This course is organised by SIB Swiss Institute of Bioinformatics, in collaboration with the Clinical Pathology Division of the University Hospital of Geneva (HUG). 2021-03-15 09:00:00 UTC 2021-03-15 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Extracting biological information from gene lists (ONLINE LIVE TRAINING)

    15 March 2021

    Cambridge, United Kingdom

    Elixir node event
    Extracting biological information from gene lists (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/extracting-biological-information-from-gene-lists-online-live-training-d0278754-5f41-4b1c-82e6-eadb23f9ca28 PLEASE NOTE that until further notice, due to the evolving situation with Coronavirus no courses will be offered as classroom based at the Training Facility. The Bioinformatics Team will be teaching the course live online in conjunction with the presenters. Many experimental designs end up producing lists of hits, usually based around genes or transcripts. Sometimes these lists are small enough that they can be examined individually, but often it is useful to do a more structured functional analysis to try to automatically determine any interesting biological themes which turn up in the lists. This course looks at the various software packages, databases and statistical methods which may be of use in performing such an analysis. As well as being a practical guide to performing these types of analysis the course will also look at the types of artefacts and bias which can lead to false conclusions about functionality and will look at the appropriate ways to both run the analysis and present the results for publication. Course materials are available [here](https://www.bioinformatics.babraham.ac.uk/training.html#fagl). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3748734&course-title=Extracting%20biological%20information%20from%20gene%20lists).'' 2021-03-15 09:30:00 UTC 2021-03-15 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Biology Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Best practices in High-Perfomance Computing (sciCORE cluster) - streamed

    17 March 2021

    Streamed from Basel, Switzerland

    Elixir node event
    Best practices in High-Perfomance Computing (sciCORE cluster) - streamed https://tess.elixir-europe.org/events/best-practices-in-high-perfomance-computing-scicore-cluster-streamed This course will be streamed only for the registered participants. Registered participants will receive specific information directly from the respective course’s organizers. 2021-03-17 09:00:00 UTC 2021-03-17 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Managing your Research Data (Online)

    19 March 2021

    Cambridge, United Kingdom

    Elixir node event
    Managing your Research Data (Online) https://tess.elixir-europe.org/events/managing-your-research-data-online-5bc7a95c-ab27-40ca-b077-6cbed40277f1 PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. How much data would you lose if your laptop was stolen? Have you ever emailed your colleague a file named 'final_final_versionEDITED'? Have you ever struggled to import your spreadsheets into R? Would you be able to write a Data Management Plan as part of a grant proposal? As a researcher, you will encounter research data in many forms, ranging from measurements, numbers and images to documents and publications. Whether you create, receive or collect data, you will certainly need to organise it at some stage of your project. This workshop will provide an overview of some basic principles on how we can work with data more effectively. We will discuss the best practices for research data management and organisation so that our research is auditable and reproducible by ourselves, and others, in the future. Course materials are available [here](https://datachampcam.github.io/avoid-data-disaster/) This event is part of a series of training courses organized in collaboration with the Bioinformatics Core Facility at [CRUK Cambridge Institute](http://www.cruk.cam.ac.uk/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3730088&course-title=Managing%20your%20Research%20Data).'' 2021-03-19 10:00:00 UTC 2021-03-19 16:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • First Steps with Python in Life Sciences - streamed

    22 - 24 March 2021

    Streamed from Basel, Switzerland

    Elixir node event
    First Steps with Python in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-python-in-life-sciences-440ebe81-e125-459a-8249-c99636c80aeb This course will be streamed only for registered participants. Registered participants will receive information from the course organizer in due time. 2021-03-22 09:00:00 UTC 2021-03-24 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps with Python in Life Sciences - streamed

    22 - 24 March 2021

    Streamed from Basel, Switzerland

    Elixir node event
    First Steps with Python in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-python-in-life-sciences-streamed This course is now full with a long waiting list. 2021-03-22 09:00:00 UTC 2021-03-24 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Analysis of bulk RNA-seq data (ONLINE LIVE TRAINING)

    22 - 24 March 2021

    Cambridge, United Kingdom

    Elixir node event
    Analysis of bulk RNA-seq data (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/analysis-of-bulk-rna-seq-data-online-live-training-ee05caa6-487f-4a18-b800-2dca60520065 PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. The aim of this course is to familiarize the participants with the primary analysis of RNA-seq data. This course starts with a brief introduction to RNA-seq and discusses quality control issues. Next, we will present the alignment step, quantification of expression and differential expression analysis. For downstream analysis we will focus on tools available through the Bioconductor project for manipulating and analysing bulk RNA-seq. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3748780&course-title=Analysis%20of%20bulk%20RNA-seq%20data).'' 2021-03-22 09:30:00 UTC 2021-03-24 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR RNA-Seq Data mining Transcriptomics Data visualisation Functional genomics Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Introduction to Command Line Linux (Online)

    25 March 2021

    Cambridge, United Kingdom

    Elixir node event
    Introduction to Command Line Linux (Online) https://tess.elixir-europe.org/events/introduction-to-command-line-linux-online PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. This short (0.5 day) intensive course serves to introduce you to the command-line interface in Linux. It is based upon elements of the Software Carpentries Shell(novice) and Shell(extras) courses. It is recommended for those CI personnel planning on attending the CI High Performance Computing facilities (Cluster) course. This course is run by the [CRUK CI Bioinformatics and IT core](https://www.cruk.cam.ac.uk/core-facilities/bioinformatics-core/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3800791&course-title=Introduction%20to%20Command%20Line%20Linux).'' 2021-03-25 13:00:00 UTC 2021-03-25 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] The course is recommended for all staff and students who use Linux in their research or plan on attending the CI High Performance Computing facilities (Cluster) course.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • An Introduction to Solving Biological Problems with Python (ONLINE LIVE TRAINING)

    29 - 30 March 2021

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with Python (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-python-online-live-training-5128e676-3e0b-4560-8588-82a32afadf29 PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. This course provides a practical introduction to the writing of Python programs for the complete novice. Participants are lead through the core aspects of Python illustrated by a series of example programs. Upon completion of the course, attentive participants will be able to write simple Python programs and customize more complex code to fit their needs. Course materials are available [here](http://pycam.github.io/). Please note that the content of this course has recently been updated. This course now mostly focuses on core concepts including Python syntax, data structures and reading/writing files. Concepts and strategies for working more effectively with Python are now the focus of a new 2-days course, [Data Science in Python](http://training.csx.cam.ac.uk/bioinformatics/course/bioinfo-dspyt/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3732841&course-title=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20Python).'' 2021-03-29 08:30:00 UTC 2021-03-30 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Introduction to R Shiny

    29 March 2021

    Bern, Switzerland

    Elixir node event
    Introduction to R Shiny https://tess.elixir-europe.org/events/introduction-to-r-shiny-7c523dd5-326e-4c63-8885-097e76e33af5 Overview Shiny is an open-source R package that allows building interactive web applications from R, and without knowledge of web-development, enabling data scientists to make their data or analysis interactively explorable and accessible to 2021-03-29 09:00:00 UTC 2021-03-29 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to R Shiny - streamed

    29 March 2021

    Streamed from Lausanne, Switzerland

    Elixir node event
    Introduction to R Shiny - streamed https://tess.elixir-europe.org/events/introduction-to-r-shiny-91e31089-6657-47e5-abc3-190c0e66ffa2 This course is oversubscribed with a long waiting list. 2021-03-29 09:00:00 UTC 2021-03-29 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • NGS - Genome variant analysis - streamed

    30 - 31 March 2021

    Streamed from Bern, Switzerland

    Elixir node event
    NGS - Genome variant analysis - streamed https://tess.elixir-europe.org/events/ngs-genome-variant-analysis-65d385b7-2a1d-4b26-a539-5f7e71eacf04 This course is now full with a waiting list. This course will be streamed only for the registered participants. Registered participants will receive specific information directly from the respective course’s organizers. 2021-03-30 09:00:00 UTC 2021-03-31 00:00:00 UTC SIB, Streamed from Bern, Switzerland SIB Streamed from Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to Scientific Figure Design (ONLINE LIVE TRAINING)

    1 April 2021

    Cambridge, United Kingdom

    Elixir node event
    Introduction to Scientific Figure Design (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/introduction-to-scientific-figure-design-online-live-training-40c3cb6f-2b31-47af-a93c-5841e69e7d95 PLEASE NOTE that until further notice, due to the evolving situation with Coronavirus no courses will be offered as classroom based at the Training Facility. The Bioinformatics Team will be teaching the course live online in conjunction with the presenters. This course provides a practical guide to producing figures for use in reports and publications. It is a wide ranging course which looks at how to design figures to clearly and fairly represent your data, the practical aspects of graph creation, the allowable manipulation of bitmap images and compositing and editing of final figures. The course will use a number of different open source software packages and is illustrated with a number of example figures adapted from common analysis tools. Further information and access to the course materials is [here](http://www.bioinformatics.babraham.ac.uk/training.html#figuredesign). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3748804&course-title=Introduction%20to%20Scientific%20Figure%20Design).'' 2021-04-01 08:30:00 UTC 2021-04-01 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Data visualisation Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Data Science in Python (ONLINE LIVE TRAINING)

    8 - 9 April 2021

    Cambridge, United Kingdom

    Elixir node event
    Data Science in Python (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/data-science-in-python-online-live-training-9dcba601-4c55-44a0-88bc-7d06811329f3 PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. This course covers concepts and strategies for working more effectively with Python with the aim of writing reusable code, using function and libraries. Participants will acquire a working knowledge of key concepts which are prerequisites for advanced programming in Python e.g. writing modules and classes. Note: this course is the continuation of the [Introduction to Solving Biological Problems with Python](http://training.csx.cam.ac.uk/bioinformatics/course/bioinfo-python/); participants are expected to have attended the introductory Python course and/or have acquired some working knowledge of Python. This course is also open to Python beginners who are already fluent in other programming languages as this will help them to quickly get started in Python. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3748813&course-title=Data%20Science%20in%20Python).'' 2021-04-08 08:30:00 UTC 2021-04-09 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Biology Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Protein sequence databases and sequence annotation at UniProtKB - streamed

    12 April 2021

    Streamed from Geneva, Switzerland

    Elixir node event
    Protein sequence databases and sequence annotation at UniProtKB - streamed https://tess.elixir-europe.org/events/protein-sequence-databases-and-sequence-annotation-at-uniprotkb-streamed This course will be streamed only for registered participants. Registered participants will receive information from the course organizer in due time. 2021-04-12 09:00:00 UTC 2021-04-12 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Protein sequence databases and sequence annotation at UniProtKB - streamed

    12 April 2021

    Streamed from Geneva, Switzerland

    Elixir node event
    Protein sequence databases and sequence annotation at UniProtKB - streamed https://tess.elixir-europe.org/events/protein-sequence-databases-and-sequence-annotation-at-uniprotkb-streamed-b2c66668-6301-46f4-b90d-8661aaeba3b5 This course will be streamed only for registered participants. Registered participants will receive information from the course organizer in due time. 2021-04-12 09:00:00 UTC 2021-04-12 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Core Statistics (ONLINE LIVE TRAINING)

    13 - 27 April 2021

    Cambridge, United Kingdom

    Elixir node event
    Core Statistics (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/core-statistics-online-live-training-372cc372-3912-4b4b-841e-95abaa36090a PLEASE NOTE that this course will be taught live online, with tutors available to help you throughout if have any questions. All resources and lectures will be recorded and uploaded to the course VLE page so that you will be able to access that information even if technical or time zone restrictions means that you aren't able to join us for all of the live sessions. This [award winning](https://www.cambridge.org/core/cambridge-technology-enabled-learning-prize-2020) virtually delivered course is intended to provide a strong foundation in practical statistics and data analysis using the R or Python software environments. The underlying philosophy of the course is to treat statistics as a practical skill rather than as a theoretical subject and as such the course focuses on methods for addressing real-life issues in the biological sciences. There are three core goals for this course: # Use R or Python confidently for statistics and data analysis # Be able to analyse datasets using standard statistical techniques # Know which tests are and are not appropriate Both R and Python are free software environments that are suitable for statistical and data analysis. In this course, we explore classical statistical analysis techniques starting with simple hypothesis testing and building up to linear models and power analyses. The focus of the course is on practical implementation of these techniques and developing robust statistical analysis skills rather than on the underlying statistical theory. After the course you should feel confident to be able to select and implement common statistical techniques using R or Python and moreover know when, and when not, to apply these techniques. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3816286&course-title=Core%20Statistics).'' 2021-04-13 08:30:00 UTC 2021-04-27 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individualsThis course is included as part of several DTP and MPhil programmesas well as other departmental training within the University of Cambridge (potentially under a different name) so participants who have attended statistics training elsewhere should check before applying. workshops_and_courses [] HDRUK
  • Docker and Singularity for reproducible research: getting started with containers

    13 April 2021

    Streamed from Bern, Switzerland

    Elixir node event
    Docker and Singularity for reproducible research: getting started with containers https://tess.elixir-europe.org/events/docker-and-singularity-for-reproducible-research-getting-started-with-containers This course is now full with a waiting list. Overview Reproducible analysis in bioinformatics goes beyond good documentation and sharing code. Often, analyses depend on an entire environment with many different programs, libraries and settings. 2021-04-13 09:00:00 UTC 2021-04-13 00:00:00 UTC SIB, Streamed from Bern, Switzerland SIB Streamed from Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First steps with R in Life Sciences - streamed

    15 - 16 April 2021

    Streamed from Lausanne, Switzerland

    Elixir node event
    First steps with R in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-r-in-life-sciences-207ad345-2097-436a-b1ad-35f807673310 Overview R is a complete, flexible and open source system for statistical analysis and graphics, which has become a tool of choice for biologists and biomedical scientists who need to analyse and visualise large amounts of data. 2021-04-15 09:00:00 UTC 2021-04-16 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First steps with R in Life Sciences - streamed

    15 - 16 April 2021

    Streamed from Lausanne and Basel, Switzerland

    Elixir node event
    First steps with R in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-r-in-life-sciences-streamed This course is now full with a long waiting list. 2021-04-15 09:00:00 UTC 2021-04-16 00:00:00 UTC SIB, Streamed from Lausanne and Basel, Switzerland SIB Streamed from Lausanne and Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Intermediate statistics: data analysis in practice - streamed

    21 - 22 April 2021

    Streamed from Lausanne, Switzerland

    Elixir node event
    Intermediate statistics: data analysis in practice - streamed https://tess.elixir-europe.org/events/intermediate-statistics-data-analysis-in-practice This course will be streamed only for the registered participants. Registered participants will receive specific information directly from the respective course’s organizers. 2021-04-21 09:00:00 UTC 2021-04-22 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps with UNIX in Life Sciences - streamed

    27 April 2021

    Streamed from Lausanne, Switzerland

    Elixir node event
    First Steps with UNIX in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-unix-in-life-sciences-c676cc79-09c9-4114-903f-4747ab562e6e This course will be streamed only for the registered participants. Registered participants will receive specific information directly from the respective course’s organizers. 2021-04-27 09:00:00 UTC 2021-04-27 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Snakemake workshop (ONLINE LIVE TRAINING)

    28 April 2021

    Cambridge, United Kingdom

    Elixir node event
    Snakemake workshop (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/snakemake-workshop-online-live-training PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. Data analyses usually entail the application of many command line tools or scripts to transform, filter, aggregate or plot data and results. With ever increasing amounts of data being collected in science, reproducible and scalable automatic workflow management becomes increasingly important. The [Snakemake](https://snakemake.readthedocs.io/en/stable/) workflow management system is a tool to create reproducible and scalable data analyses. Workflows are described via a human readable, Python based language. They can be seamlessly scaled to server, cluster, grid and cloud environments, without the need to modify the workflow definition. Finally, Snakemake workflows can entail a description of required software, which will be automatically deployed to any execution environment. With over 200k downloads on Bioconda, and on average 6 new citations per week, Snakemake is a widely used and accepted standard for reproducible data science that has powered numerous high impact publications. This 1-day workshop will teach how to use Snakemake for reproducible data analysis. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3824574&course-title=Snakemake%20workshop).'' 2021-04-28 08:30:00 UTC 2021-04-28 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Galaxy introduction for life scientists

    28 - 29 April 2021

    Lausanne, Switzerland

    Galaxy introduction for life scientists https://tess.elixir-europe.org/events/galaxy-introduction-for-life-scientists-f44d2ef2-64d6-4aef-829c-749f6474e5db This course will take place in Lausanne with rules complying to COVID situation (distances and hygiene). 2021-04-28 09:00:00 UTC 2021-04-29 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] Lucille Delisle, Hans-Rudolf Hotz [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

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