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33 events found

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  • "Ready for BioData Management?" Data Stewardship program for the life sciences

    21 February - 31 October 2022

    Oeiras, Portugal

    "Ready for BioData Management?" Data Stewardship program for the life sciences https://tess.elixir-europe.org/events/ready-for-biodata-management-data-stewardship-program-for-the-life-sciences BioData.pt | ELIXIR Portugal, in collaboration with several other organizations has designed a program to train the first generation of Data Stewards for the life sciences, to support the implementation of data management, open science and FAIR data principles in Portuguese R&I organizations. It will unfold from February to October 2022, allowing trainees get some practice and consolidate the acquired knowledge. It will comprise an introductory module covering the basic concepts of Data Stewardship followed by two assignments and end with a hands-on course for knowledge consolidation. 2022-02-21 09:00:00 UTC 2022-10-31 17:00:00 UTC BioData.pt | ELIXIR Portugal Online and F2F (See details in training documentation), Oeiras, Portugal Online and F2F (See details in training documentation) Oeiras Portugal FAIR data Data submission, annotation, and curation Bioinformatics Data management Biodata.pt - Elixir's portuguese node of the european projec info@biodata.pt ELIXIR Life Science Researchers 24 workshops_and_courses registration_of_interest data managementData management plandata stewardshipdata annotationlife sciencestraining
  • Introduction to Glycoinformatics - lectures and practicals - streamed

    30 - 31 May 2022

    Streamed from Geneva, Switzerland

    Elixir node event
    Introduction to Glycoinformatics - lectures and practicals - streamed https://tess.elixir-europe.org/events/introduction-to-glycoinformatics-lectures-and-practicals-streamed This course will be streamed only for registered participants. Overview The word glycoprotein is often used yet the “glyco” part is hardly ever described. 2022-05-30 09:00:00 UTC 2022-05-31 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to Glycoinformatics - lectures - streamed

    30 - 31 May 2022

    Streamed from Geneva, Switzerland

    Elixir node event
    Introduction to Glycoinformatics - lectures - streamed https://tess.elixir-europe.org/events/introduction-to-glycoinformatics-lectures-streamed-60ee2d1f-f02a-41e5-b067-0d7381880e71 This course will be streamed only for registered participants. Overview The word glycoprotein is often used yet the “glyco” part is hardly ever described. 2022-05-30 09:00:00 UTC 2022-05-31 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Intermediate Python

    3 June 2022

    Bern, Switzerland

    Elixir node event
    Intermediate Python https://tess.elixir-europe.org/events/intermediate-python-c512cb9a-2e2c-45b7-a7a0-77bda8569003 Overview Python is an open-source and general-purpose scripting language which runs on all major operating systems. It was designed to be easily read and written with comparatively simple syntax. 2022-06-03 09:00:00 UTC 2022-06-03 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Bacterial Genome Assembly

    14 - 16 June 2022

    Elixir node event
    Bacterial Genome Assembly https://tess.elixir-europe.org/events/bacterial-genome-assembly Bacterial Genome Assembly - Tuesday 14 & Thursday 16 June 2022 With the advent and improvement of long read sequencing technologies, bacterial genome assembly and annotation is easier and more effective than ever. At the end of this course you will be able to perform genome assembly and polishing of PacBio sequencing followed by annotation with prokka. Additionally you will be able to assess the quality of the genome with contiguity measures from QUAST and genome completeness estimation with BUSCO. Places are restricted to UK-based researchers and only 20 places are available so please only register if you intend on attending. The workshop will be held over two days on Tuesday 14 and Thursday 16 June 2022, 10am-4pm, with registration opening 9.30am on Tuesday. The deadline to register is Monday 30th June. You will hear later that week whether you have been invited and will need to confirm your attendance. Register to NEOF mailing list to hear first about future NEOF free bioinformatics courses: https://neof.org.uk/news/ 2022-06-14 09:00:00 UTC 2022-06-16 17:00:00 UTC NEOF [] [] [] [] [] []
  • Introduction to R for Biologists (ONLINE LIVE TRAINING)

    15 - 23 June 2022

    Cambridge, United Kingdom

    Elixir node event
    Introduction to R for Biologists (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/introduction-to-r-for-biologists-online-live-training-c59887f9-3eb5-49fd-a124-dee8194ac81a R is one of the leading programming languages in Data Science. It is widely used to perform statistics, machine learning, visualisations and data analyses. It is an open source programming language so all the software we will use in the course is free. This course is an introduction to R designed for participants with no programming experience. We will start from scratch by introducing how to start programming in R and progress our way and learn how to read and write to files, manipulate data and visualise it by creating different plots - all the fundamental tasks you need to get you started analysing your data. During the course we will be working with one of the most popular packages in R; tidyverse that will allow you to manipulate your data effectively and visualise it to a publication level standard. Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=4178900&course-title=Introduction%20to%20R%20for%20Biologists).'' 2022-06-15 08:30:00 UTC 2022-06-23 12:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Introduction to Machine Learning with Python

    16 - 17 June 2022

    Lausanne or streamed, Switzerland

    Elixir node event
    Introduction to Machine Learning with Python https://tess.elixir-europe.org/events/introduction-to-machine-learning-with-python-c778fea7-fbc6-4a51-8aae-276118a6ce62 Overview With the rise of new technologies, the volume of omics data in the fields of biology and medicine has grown exponentially in recent times and a major issue is to mine useful predictive knowledge from these data. 2022-06-16 09:00:00 UTC 2022-06-17 00:00:00 UTC SIB, Lausanne or streamed, Switzerland SIB Lausanne or streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Analysis of single cell RNA-seq data (ONLINE LIVE TRAINING)

    17 June - 1 July 2022

    Cambridge, United Kingdom

    Elixir node event
    Analysis of single cell RNA-seq data (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/analysis-of-single-cell-rna-seq-data-online-live-training-b8ef1f2a-776d-42f4-a490-f018700ae7ba Recent technological advances have made it possible to obtain genome-wide transcriptome data from single cells using high-throughput sequencing (scRNA-seq). Even though scRNA-seq makes it possible to address problems that are intractable with bulk RNA-seq data, analysing scRNA-seq is also more challenging. In this course we will be surveying the existing problems as well as the available computational and statistical frameworks available for the analysis of scRNA-seq. Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=4306409&&course-title=Analysis%20of%20single%20cell%20RNA-seq%20data).'' 2022-06-17 08:30:00 UTC 2022-07-01 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Transcriptomics Functional genomics Data visualisation Data mining Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • EMBL-EBI: Network Analysis with Cytoscape (Online)

    20 - 21 June 2022

    Cambridge, United Kingdom

    Elixir node event
    EMBL-EBI: Network Analysis with Cytoscape (Online) https://tess.elixir-europe.org/events/embl-ebi-network-analysis-with-cytoscape-online-b82c9960-d4ec-4b28-bd6c-c6e413c587cf This course provides an introduction to the basic theory and concepts of network analysis. Attendees will learn how to construct protein-protein interaction networks and subsequently use these to overlay large-scale data such as that obtained through RNA-Seq or mass-spec proteomics. The course will focus on giving attendees hands-on experience in the use of one of the most commonly used open source Network Visualisation Platforms, [Cytoscape](https://cytoscape.org/what_is_cytoscape.html). The course will also access and analyse the data through Cytoscape apps, including IntAct app. Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=4306738&course-title=EMBL-EBI:%20Network%20Analysis%20with%20Cytoscape).'' 2022-06-20 08:30:00 UTC 2022-06-21 12:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] This workshop is aimed at researchers interested in proteinsnetwork analysisprotein-protein interactions and related areasBiologists and bioinformaticiansGraduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Reproducible Research with R (ONLINE LIVE TRAINING)

    20 June 2022

    Cambridge, United Kingdom

    Elixir node event
    Reproducible Research with R (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/reproducible-research-with-r-online-live-training-f5c6b5ba-52df-4afd-b3fb-c828d022d030 This course introduces concepts about reproducibility that can be used when you are programming in R. We will explore how to create notebooks - a way to integrate your R analyses into reports using Rmarkdown. The course also introduces the concept of version control. We will learn how to create a repository on GitHub and how to work together on the same project collaboratively without creating conflicting versions of files. Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=4283511&course-title=Reproducible%20Research%20with%20R).'' 2022-06-20 08:30:00 UTC 2022-06-20 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Introduction to statistics with Python

    20 - 21 June 2022

    Basel, Switzerland

    Elixir node event
    Introduction to statistics with Python https://tess.elixir-europe.org/events/introduction-to-statistics-with-python-678b7cea-fec0-446f-8636-22e186bcde23 Overview Statistics are an integral aspect of scientific research, particularly for the life sciences which rely heavily on quantitative methodologies. 2022-06-20 09:00:00 UTC 2022-06-21 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Enrichment Analysis - streamed

    24 June 2022

    Streamed, Switzerland

    Elixir node event
    Enrichment Analysis - streamed https://tess.elixir-europe.org/events/enrichment-analysis-streamed-0241e7fb-7026-4dc8-bde8-e76da5716df0 Overview Experiments designed to quantify gene expression often yield hundreds of genes that show statistically significant differences between two classes (two biological states, two phenotype states, two experimental conditions, etc). 2022-06-24 09:00:00 UTC 2022-06-24 00:00:00 UTC SIB, Streamed, Switzerland SIB Streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to openBIS

    27 June 2022

    Lausanne or streamed, Switzerland

    Elixir node event
    Introduction to openBIS https://tess.elixir-europe.org/events/introduction-to-openbis-e75d4225-486a-4c90-a175-0e470d2a6434 Overview This course provides a general overview of openBIS, followed by a practical training session. openBIS is a combined data management platform, Electronic Laboratory Notebook, and Inventory Management System. 2022-06-27 09:00:00 UTC 2022-06-27 00:00:00 UTC SIB, Lausanne or streamed, Switzerland SIB Lausanne or streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Core Statistics using R (ONLINE LIVE TRAINING)

    29 June - 14 July 2022

    Cambridge, United Kingdom

    Elixir node event
    Core Statistics using R (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/core-statistics-using-r-online-live-training-1bdf4c7a-2283-4160-b3e3-4a8e7385502d This [award winning](https://www.cctl.cam.ac.uk/teaching-prizes/tel-prize/2020) virtually delivered course is intended to provide a strong foundation in practical statistics and data analysis using the R software environment. The underlying philosophy of the course is to treat statistics as a practical skill rather than as a theoretical subject and as such the course focuses on methods for addressing real-life issues in the biological sciences. There are three core goals for this course: # Use R confidently for statistics and data analysis # Be able to analyse datasets using standard statistical techniques # Know which tests are and are not appropriate R is an open source programming language so all of the software we will use in the course is free. In this course, we explore classical statistical analysis techniques starting with simple hypothesis testing and building up to linear models and power analyses. The focus of the course is on practical implementation of these techniques and developing robust statistical analysis skills rather than on the underlying statistical theory. After the course you should feel confident to be able to select and implement common statistical techniques using R and moreover know when, and when not, to apply these techniques. Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=4180988&course-title=Core%20Statistics%20using%20R).'' 2022-06-29 08:30:00 UTC 2022-07-14 12:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individualsThis course is included as part of several DTP and MPhil programmesas well as other departmental training within the University of Cambridge (potentially under a different name) so participants who have attended statistics training elsewhere should check before applying. workshops_and_courses [] HDRUK
  • Summer School on Genetic Epidemiology

    29 June - 2 July 2022

    Davos, Switzerland

    Elixir node event
    Summer School on Genetic Epidemiology https://tess.elixir-europe.org/events/summer-school-on-genetic-epidemiology Overview This summer school aims at providing guidelines on optimal practice in designing, analyzing, and interpreting genetic epidemiological studies, for those who would like to actively analyze DNA sequencing from whole genome sequencing or whole 2022-06-29 09:00:00 UTC 2022-07-02 00:00:00 UTC SIB, Davos, Switzerland SIB Davos Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Building Workflows in Digital Health

    29 June 2022

    Manchester, United Kingdom

    Building Workflows in Digital Health https://tess.elixir-europe.org/events/building-workflows-in-digital-health Orchestration Workflows are widely used in computational data analysis, enabling innovation and decision-making. Often the analysis components are numerous, and written by third parties, without an eye on interoperability. In addition, many competing workflow systems exist, potentially limiting portability of workflows written for any one specific workflow system. This hinders the transfer of workflows between different systems and projects, limiting their re-usability. The Common Workflow Language (CWL) project (https://www.commonwl.org/) was established in order to produce free and open standards for describing command-line tool-based workflows. The CWL language is declarative and provides a focused set of common abstractions enabling the expression of computational workflows constructed from diverse software tools. Explicit declaration of requirements for runtime environments and software containers enables portability and reuse. Workflows written according to the CWL standards are a reusable description of that analysis, runnable on a diverse set of computing environments. 2022-06-29 10:00:00 UTC 2022-06-29 17:00:00 UTC N8CIR University Place, University of Manchester, Manchester, United Kingdom University Place, University of Manchester Manchester United Kingdom M13 9PL Bioinformatics Workflows Data architecture, analysis and design University of Manchester [] [] workshops_and_courses registration_of_interest workflowsdata-analysiscomputational methods
  • Research Data Management and Data Management Plan

    30 June - 1 July 2022

    Bern or Lausanne, Switzerland

    Elixir node event
    Research Data Management and Data Management Plan https://tess.elixir-europe.org/events/research-data-management-and-data-management-plan Overview Recent studies have shown that worldwide, between 51% and 89% of published life sciences research is not reproducible, with consequent losses estimated at around $100 billions/year in biomedical research (Chalmers et al., 2009; Freedman 2022-06-30 09:00:00 UTC 2022-07-01 00:00:00 UTC SIB, Bern or Lausanne, Switzerland SIB Bern or Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Single-cell Transcriptomics

    4 - 6 July 2022

    Bern, Switzerland

    Elixir node event
    Single-cell Transcriptomics https://tess.elixir-europe.org/events/single-cell-transcriptomics-be70d45c-e4dd-4319-866d-d0c192c60ccf Overview In contrast to the Bulk RNA sequencing used to quantify the abundance of gene and transcript expression at a whole population level, single-cell RNA sequencing (scRNAseq) allows researchers to study gene expression profile at a single cell 2022-07-04 09:00:00 UTC 2022-07-06 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Advanced Python for Biologists 2022

    4 - 15 July 2022

    Elixir node event
    Advanced Python for Biologists 2022 https://tess.elixir-europe.org/events/advanced-python-for-biologists-2022 Python is a dynamic, readable language that is a popular platform for all types of bioinformatics work, from simple one-off scripts to large, complex software projects. This workshop is aimed at people who already have a basic knowledge of Python and are interested in using the language to tackle larger problems. In it, we will look in detail at the parts of the language which are particularly useful in scientific programming, and at the tools Python offers for making development faster and easier. The workshop will use examples and exercises drawn from various aspects of bioinformatics work. After completing the workshop, students should be in a position to (1) take advantage of the advanced language features in their own programs and (2) use appropriate tools when developing software programs. This event will be delivered virtually via Zoom & Slack, see more details on the further information tab. Please see here for a detailed syllabus of the course. 2022-07-04 09:00:00 UTC 2022-07-15 17:00:00 UTC Earlham Institute [] [] [] [] [] []
  • Introduction to working with UNIX and bash (ONLINE LIVE TRAINING)

    6 - 7 July 2022

    Cambridge, United Kingdom

    Elixir node event
    Introduction to working with UNIX and bash (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/introduction-to-working-with-unix-and-bash-online-live-training-b013c4ea-fc73-42d1-9ac5-b11435801e1b PLEASE NOTE The Bioinformatics Team are presently teaching many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We continue to monitor advice from the UK government and the University of Cambridge on resuming in-person teaching back in the training room. Using the Linux operating system and the bash command line interface, we will demonstrate the basic structure of the UNIX operating system and how we can interact with it using a basic set of commands. Applying this, we will learn how to navigate the filesystem, manipulate text-based data and structure simple pipelines out of these commands. Building on the techniques learnt so far, we will then construct bash scripts combining the commands and structures already learnt into more complex, reusable tools. We will look at how we can apply these scripts to common problems faced in UNIX environments such as: communicating with remote servers; managing custom software installations and integrating these tools into our simple pipelines. This course is targeted at participants with no prior experience working with UNIX-like systems (OSX, Linux) or command line interfaces. Please note that if you are not eligible for a University of Cambridge Raven account you will need to Book or register Interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=4316938&course-title=Introduction%20to%20working%20with%20Unix%20and%20bash).'' 2022-07-06 13:00:00 UTC 2022-07-07 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • RNA-seq gene expression and pathway analysis

    12 - 14 July 2022

    Elixir node event
    RNA-seq gene expression and pathway analysis https://tess.elixir-europe.org/events/rna-seq-gene-expression-and-pathway-analysis RNA-seq gene expression and pathway analysis - 12&14 July 2022 RNA-Seq (aka whole transcriptomic shotgun sequencing) aims to determine the presence and quantity of RNA in a biological sample at a given moment in time. This allows you to determine the level of expression of these genes and therefore compare these expressions across different sample groups, i.e. Differential Gene Expression (DGE). At the end of this course you will be able to align the transcriptomes of samples to a reference genome to determine gene expression levels. Following this you will be able to carry out Differential Gene Expression analysis to determine which genes are up and down regulated between sample groups. Places are restricted to UK-based researchers and only 20 places are available so please only register if you intend on attending. The workshop will be held over two days on Tuesday 12 and Thursday 14 July 2022, 10am-4pm, with registration opening 9.30am on Tuesday. The deadline to register is Monday 27 June, 2 weeks before the course. You will hear later that week whether you have been invited and will need to confirm your attendance. Register to NEOF mailing list to hear first about future NEOF free bioinformatics courses: https://neof.org.uk/news/ 2022-07-12 09:00:00 UTC 2022-07-14 17:00:00 UTC [] [] [] [] [] []
  • High Performance Computing: An Introduction (ONLINE LIVE TRAINING)

    13 - 14 July 2022

    Cambridge, United Kingdom

    Elixir node event
    High Performance Computing: An Introduction (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/high-performance-computing-an-introduction-online-live-training-2e94ddaf-6071-4664-9d5d-619b49b20888 PLEASE NOTE The Bioinformatics Team are presently teaching many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We continue to monitor advice from the UK government and the University of Cambridge on resuming in-person teaching back in the training room. Have you heard about High Performance Computing, but are not sure what it is or whether it is relevant for your work? Would you like to use a HPC, but are not sure where to start? Are you using your personal computer to run computationally demanding tasks, which take long and slow down your work? Do you need to use software that runs on Linux, but don't have access to a Linux computer? If any of these questions apply to you, then this course might be for you! Knowing how to work on a High Performance Computing system is an essential skill for applications such as bioinformatics, big-data analysis, image processing, machine learning, parallelising tasks, and other high-throughput applications. In this course we will cover the basics of High Performance Computing, what it is and how you can use it in practice. This is a hands-on workshop, which should be accessible to researchers from a range of backgrounds and offering several opportunities to practice the skills we learn along the way. As an optional session for those interested, we will also introduce the (free) HPC facilities available at Cambridge University (the course is not otherwise Cambridge-specific). Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=4316957&course-title=High%20Performance%20Computing:%20An%20Introduction).'' 2022-07-13 13:00:00 UTC 2022-07-14 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] This course is aimed at students and researchers of any background.We assume no prior knowledge of what a HPC is or how to use it.It may be particularly useful for those who have attended other Facility Courses and now need to process their data on a Linux server. It will also benefit those who find themselves using their personal computers to run computationally demanding analysis/simulations and would like to learn how to adapt these to run on a HPC.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Advanced Statistics: Statistical Modelling

    22 - 25 August 2022

    Lausanne, Switzerland

    Elixir node event
    Advanced Statistics: Statistical Modelling https://tess.elixir-europe.org/events/advanced-statistics-statistical-modelling-dc58174b-c34c-468a-a484-1fa4c7ed7957 Overview While the statistical models and tools presented in an introductory statistics course (such as linear regression) can be used to answer a wide range of questions in life sciences, many types of data can not be analyzed using these simple 2022-08-22 09:00:00 UTC 2022-08-25 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Advanced Programming with R

    29 - 31 August 2022

    Lausanne, Switzerland

    Elixir node event
    Advanced Programming with R https://tess.elixir-europe.org/events/advanced-programming-with-r Overview This 3-day advanced course is targeted at life scientists or bioinformaticians using the R statistical software who want to extend their knowledge. Lectures will be conducted in the morning, with practicals in the afternoon. 2022-08-29 09:00:00 UTC 2022-08-31 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to RNA-Seq: From quality control to pathway analysis

    1 - 2 September 2022

    Basel, Switzerland

    Elixir node event
    Introduction to RNA-Seq: From quality control to pathway analysis https://tess.elixir-europe.org/events/introduction-to-rna-seq-from-quality-control-to-pathway-analysis-d8c6ae2e-37f6-44fe-826e-a3348db94bd4 Overview This two-day course will present the theory and bioinformatics tools required to analyze RNA-seq gene expression data, The course will present the theory and bioinformatics tools required to analyse RNA-seq gene expression data, from the 2022-09-01 09:00:00 UTC 2022-09-02 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Comparative Genomics

    12 - 14 September 2022

    Streamed or Lausanne, Switzerland

    Elixir node event
    Comparative Genomics https://tess.elixir-europe.org/events/comparative-genomics-d3e772d0-ca37-4239-8d74-2ac20f260036 Overview The aims of this course are to (i) explore key evolutionary concepts, (ii) examine different methodological approaches, and (iii) gain hands-on experience in eukaryotic comparative genomic analyses. 2022-09-12 09:00:00 UTC 2022-09-14 00:00:00 UTC SIB, Streamed or Lausanne, Switzerland SIB Streamed or Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to high-performance computing (sciCORE cluster)

    14 September 2022

    Streamed from Basel, Switzerland

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-73ca4b1c-7185-4a0a-9ea7-17be4fe5f45b This course is susceptible to be streamed to the registered participants, depending on the evolution of the sanitary situation Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and 2022-09-14 09:00:00 UTC 2022-09-14 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Good practice in high-throughput experiments

    21 - 22 September 2022

    Zurich or streamed, Switzerland

    Elixir node event
    Good practice in high-throughput experiments https://tess.elixir-europe.org/events/good-practice-in-high-throughput-experiments-b5752b6c-f7ee-4865-8875-ff2ee12485eb Overview This course offers an overview of good practice in high-throughput experiments (e.g. next-generation sequencing or compound screening). Particularly we focus on pitfalls in the design of projects (e.g. 2022-09-21 09:00:00 UTC 2022-09-22 00:00:00 UTC SIB, Zurich or streamed, Switzerland SIB Zurich or streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps with UNIX for Life Scientists

    26 September 2022

    Zurich, Switzerland

    Elixir node event
    First Steps with UNIX for Life Scientists https://tess.elixir-europe.org/events/first-steps-with-unix-for-life-scientists Overview With a constant evolution of technologies, life scientists (such as laboratory biologists) are faced with an increasing need for bioinformatics skills to deal with high-throughput data storage, retrieval and analysis. 2022-09-26 09:00:00 UTC 2022-09-26 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps with Python in Life Sciences

    28 - 30 September 2022

    Lausanne, Switzerland

    Elixir node event
    First Steps with Python in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-python-in-life-sciences-05751ded-3ccd-4325-a3bf-7fd378452f09 Overview Have you ever been stuck with a file format that doesn't precisely conform to your needs, found yourself doing annoyingly repetitive data manipulations, or struggled to efficiently manage and explore your data? Python to the rescue! 2022-09-28 09:00:00 UTC 2022-09-30 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

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