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35 events found

Node: Norway  or Sweden 

  • Antibody based technologies

    25 March 2019

    Elixir node event
    Antibody based technologies https://tess.elixir-europe.org/events/antibody-based-technologies 2019-03-25 09:00:00 UTC 2019-03-25 17:00:00 UTC [] [] [] workshops_and_courses [] []
  • Cryo-EM Course on Tomography

    26 - 28 March 2019

    Elixir node event
    Cryo-EM Course on Tomography https://tess.elixir-europe.org/events/cryo-em-course-on-tomography 2019-03-26 09:00:00 UTC 2019-03-28 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Software carpentry workshop

    1 - 3 April 2019

    Bergen, Norway

    Software carpentry workshop https://tess.elixir-europe.org/events/software-carpentry-workshop-3acee97f-5c7d-48a0-b87d-a6523f239ce9 Software Carpentry aims to help researchers get their work done in less time and with less pain by teaching them basic research computing skills. This hands-on workshop will cover basic concepts and tools, including program design, version control, data management, and task automation. Participants will be encouraged to help one another and to apply what they have learned to their own research problems. The WS is over three days. The first day will concentrate on Unix shell and Git, and day two and day three on R for Reproducible Scientific Analysis. 2019-04-01 09:00:00 UTC 2019-04-03 17:00:00 UTC Bergen, Bergen, Norway Bergen Bergen Hordaland Norway 5008 University of BergenElixir Norway David Grellscheid <d.grellscheid@gmail.com> [] Graduate StudentsResearchers workshops_and_courses first_come_first_served Software Carpentry R-programmingUNIXShellReproducible Science
  • Carpentries Instructor Training course/event (Elixir)

    3 - 5 April 2019

    Elixir node event
    Carpentries Instructor Training course/event (Elixir) https://tess.elixir-europe.org/events/carpentries-instructor-training-course-event-elixir Room Air/Fire Web page Carpentries Instructor Training Course: https://carpentries.github.io/instructor-training/ 2019-04-03 09:00:00 UTC 2019-04-05 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Carpentry Instructor Training supported by ELIXIR Sweden - Improve your teaching/pedagogical skills.

    3 - 5 April 2019

    Elixir node event
    Carpentry Instructor Training supported by ELIXIR Sweden - Improve your teaching/pedagogical skills. https://tess.elixir-europe.org/events/carpentry-instructor-training-supported-by-elixir-sweden-improve-your-teaching-pedagogical-skills #training Course dates: 2019-04-03 – 2019-04-04 (9:30 – 17:30) Course location: Air. SciLifeLab, Tomtebodavägen 23A, 171 65 Solna Course website: https://malvikasharan.github.io/2019-04-03-ttt-stockholm/  Description: This Elixir Train-the –Trainer and Carpentries Instructor training course in collaboration with NBIS is a course open for PhD students, postdocs, researchers and other employees wanting to professionally develop their training/teaching skills, to become a better teacher.  Important dates Application opens: February 2019  Link to registration: https://goo.gl/forms/sAI5mF6P4sJUaJNh2 Application closes: 2019-03-13 Confirmation to accepted students: one week after application closes Responsible teachers: Allegra Via, Malvika Sharan Helpers: Jessica Lindvall, Pascal Kahlem If you do not receive information according to the above dates please contact: NBIS Training coordinator Jessica Lindvall, education@nbis.se Course fee: --- The course includes lunches and coffee and we will also have a course dinner (sign up for the dinner in the registration form) Course content: https://malvikasharan.github.io/2019-04-03-ttt-stockholm/ The course is aimed at everyone who is interested in becoming a better teacher. In particular, this training is aimed at those who want to become Software Carpentry and Data Carpentry instructors, run workshops and contribute to the Carpentry training materials. You don't currently have to be an instructor or a teacher to attend this workshop, but you do need to be willing and committed to becoming one and to improving your teaching techniques. Software Carpentry and Data Carpentry's mission is to help scientists and engineers get more research done in less time and with less pain by teaching them basic lab skills for scientific computing. This hands-on two-day workshop covers the basics of educational psychology and instructional design, and looks at how to use these ideas in both intensive workshops and regular classes. The workshop is a mix of lectures and hands-on lessons where you practice giving a short lesson using approaches learned and implement some of the teaching techniques which we will discuss. This is training for teaching, not technical training; you do not need any particular technical background, and we will not be teaching that. This workshop is based on the constantly revised and updated curriculum. Requirements: When possible, participants should bring a laptop that can be connected to Internet to follow teaching materials and developing shared note. &lt;/br&gt; A device for recording audio and video (mobile phones and laptops are OK) will also be useful as throughout the two days, we are going to record one another teaching in pairs or threes. It does not have to be high-quality, but it should be good enough that you can understand what someone is saying. Please note that after this course is over, you will be asked to do three short follow-up exercises online in order to finish qualifying as an instructor: the details are available at https://carpentries.github.io/instructor-training/checkout/. If you have any questions about the workshop, the reading material, or anything else, please get in touch. All participants are required to abide by The Carpentries' Code of Conduct. Accessibility: We are committed to making this workshop accessible to everybody. Please contact the workshop organisers to let them know if need any assistance to make your participation at the workshop more comfortable. Materials will be provided in advance of the workshop and large-print handouts are available if needed by notifying the organizers in advance. If we can help making learning easier for you (e.g. requirements related to mobility, dietary etc.) please please get in touch (using contact details below) and we will attempt to provide them. Preparation: Please read the following before the workshop begins: 1. The Science of Learning Please also read through one of the episodes below carefully, so that you can do some exercises based on it on the first day of the class. 2019-04-03 09:00:00 UTC 2019-04-05 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Carpentry Instructor Training supported by ELIXIR Sweden – Improve your teaching/pedagogical skills

    3 - 4 April 2019

    Elixir node event
    Carpentry Instructor Training supported by ELIXIR Sweden – Improve your teaching/pedagogical skills https://tess.elixir-europe.org/events/carpentry-instructor-training-supported-by-elixir-sweden-improve-your-teaching-pedagogical-skills-e0613d2a-9906-4323-bc40-9070ebac8382 2019-04-03 09:00:00 UTC 2019-04-04 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • NeLS hands-on workshop

    26 April 2019

    Oslo, Norway

    Elixir node event
    NeLS hands-on workshop https://tess.elixir-europe.org/events/nels-hands-on-workshop The sixth in a series of hands-on bioinformatics workshops organized in Oslo by ELIXIR. The topic is on how you can use the Norwegian e-Infrastructure for Life Sciences (NeLS) (nels.bioinfo.no) to store and share data, and to run analyses via customizable genomics pipelines (Galaxy). Together, we will go through a complete RNA sequencing analysis pipeline. 2019-04-26 10:00:00 UTC 2019-04-26 14:00:00 UTC ELIXIR UiO node Ole-Johan Dahls hus, 23B, Gaustadalléen, Oslo, Norway Ole-Johan Dahls hus, 23B, Gaustadalléen Oslo Oslo kommune Norway 0373 Data management Bioinformatics RNA-Seq university of Oslo [] PhD studentspost-docs 25 workshops_and_courses first_come_first_served []
  • Course: RNAseq

    13 - 16 May 2019

    Elixir node event
    Course: RNAseq https://tess.elixir-europe.org/events/course-rnaseq More information will follow 2019-05-13 09:00:00 UTC 2019-05-16 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • RNA-seq data analysis

    13 - 15 May 2019

    Elixir node event
    RNA-seq data analysis https://tess.elixir-europe.org/events/rna-seq-data-analysis-bb102c9c-3745-416b-b0d4-290da7968660 2019-05-13 09:00:00 UTC 2019-05-15 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Tools for reproducible research

    14 - 15 May 2019

    Elixir node event
    Tools for reproducible research https://tess.elixir-europe.org/events/tools-for-reproducible-research-8ec06134-42d9-4f18-8a5d-3fb3ab414e3a 2019-05-14 09:00:00 UTC 2019-05-15 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Course: Genome Annotation

    15 - 18 May 2019

    Elixir node event
    Course: Genome Annotation https://tess.elixir-europe.org/events/course-genome-annotation More information will follow 2019-05-15 09:00:00 UTC 2019-05-18 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Introduction to Genome Annotation

    15 - 17 May 2019

    Elixir node event
    Introduction to Genome Annotation https://tess.elixir-europe.org/events/introduction-to-genome-annotation-2ce3da98-b5dc-490b-82e2-deb14d40b2f3 2019-05-15 09:00:00 UTC 2019-05-17 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Course: Quick and clean - advanced python for data science in Biology

    20 - 25 May 2019

    Elixir node event
    Course: Quick and clean - advanced python for data science in Biology https://tess.elixir-europe.org/events/course-quick-and-clean-advanced-python-for-data-science-in-biology More information will follow 2019-05-20 09:00:00 UTC 2019-05-25 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Course: Introduction to Bioinformatics using NGS data

    20 - 25 May 2019

    Elixir node event
    Course: Introduction to Bioinformatics using NGS data https://tess.elixir-europe.org/events/course-introduction-to-bioinformatics-using-ngs-data-72016a5b-d1c8-4b38-a688-c929f5df2b39 More information will follow 2019-05-20 09:00:00 UTC 2019-05-25 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Quick and clean: advanced Python for data science in biology

    20 - 24 May 2019

    Elixir node event
    Quick and clean: advanced Python for data science in biology https://tess.elixir-europe.org/events/quick-and-clean-advanced-python-for-data-science-in-biology-39dd812c-9151-4485-946a-3326f9818d37 2019-05-20 09:00:00 UTC 2019-05-24 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Introduction to Bioinformatics using NGS data, Gothenburg

    20 - 24 May 2019

    Elixir node event
    Introduction to Bioinformatics using NGS data, Gothenburg https://tess.elixir-europe.org/events/introduction-to-bioinformatics-using-ngs-data-gothenburg 2019-05-20 09:00:00 UTC 2019-05-24 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Course: Biostatistics Essentials: a blackboard approach

    21 - 24 May 2019

    Elixir node event
    Course: Biostatistics Essentials: a blackboard approach https://tess.elixir-europe.org/events/course-biostatistics-essentials-a-blackboard-approach Course name: Biostatistics Essentials: a blackboard approach Course dates: 2019-05-21 and 2019-05-23 Course location: SciLifeLab, Uppsala University, BMC, Husargatan 3 Please apply here: https://goo.gl/forms/6aIQ4BFIrGDJ9cL92 ------------------------------------------------ National course open for PhD students, postdocs, researchers and other employees in need of biostatistical skills within all Swedish universities. The course is geared towards life scientists wanting to be able to understand and use basic statistical methods. It would also suit those already applying biostatistical methods but have never got a chance to reflect on and truly grasp the basic statistical concepts, such as the commonly misinterpreted p-value! Important date Application opens: now Application closes: 2019-03-31 Confirmation to accepted students: 2019-04-16 Responsible teachers: Olga Dethlefsen, Eva Freyhult If you do not receive information according to the above dates please contact olga.dethlefsen@nbis.se, eva.freyhult@nbis.se Course content ● Basic statistical theory and concepts incl. stochastic variables, density and distribution functions, central limit theorem, confidence intervals ● Hypothesis testing ● Resampling ● Linear and logistic regression methods ● Model selection and regularization ● Unsupervised learning, incl. clustering and dimension reduction methods Education In this course we focus on active learning approach. The course participants are expected to do some pre-course reading and exercises, corresponding up to 16h studying. The education consists of teaching blocks alternating between mini-lectures, group discussions, live coding sessions etc. A special focus is put on understanding basic concepts by solving problems with pen and paper. We believe in less-is-more principle, so be ready to say no to digital exhaustion to truly learn something with our modern “blackboard approach”. Literature ● An Introduction to Statistical Learning, Gareth James, Daniela Witten, Trevor Hastie and Robert Tibshirani (.pdf freely available) ● Additional teachers’ choice Entry requirements ● No prior knowledge is assumed ● BYOL (bring your own laptop) with R and RStudio installed ● Prior experience using R and RStudio is welcome; pre-course exercises will be available for those new to R/RStudio Due to limited space the course can accommodate maximum of 25 participants. If we receive more applications, participants will be selected based on several criteria. Selection criteria include correct entry requirements, motivation to attend the course as well as gender and geographical balance. Course fee A course fee* of 1700 SEK will be invoiced to accepted participants. The fee includes lunches, coffee and snacks. *Please note that NBIS cannot invoice individuals 2019-05-21 09:00:00 UTC 2019-05-24 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Biostatistics Essentials: a blackboard approach

    21 - 23 May 2019

    Elixir node event
    Biostatistics Essentials: a blackboard approach https://tess.elixir-europe.org/events/biostatistics-essentials-a-blackboard-approach 2019-05-21 09:00:00 UTC 2019-05-23 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Cryo-EM sample preparation and data collection

    3 - 5 June 2019

    Elixir node event
    Cryo-EM sample preparation and data collection https://tess.elixir-europe.org/events/cryo-em-sample-preparation-and-data-collection-33ca34ed-e93e-4b7b-aac5-c167cf17dcd8 2019-06-03 09:00:00 UTC 2019-06-05 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Course: RaukR

    10 - 21 June 2019

    Elixir node event
    Course: RaukR https://tess.elixir-europe.org/events/course-raukr More information will follow 2019-06-10 09:00:00 UTC 2019-06-21 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • RaukR, Advanced R for Bioinformatics, Summer course

    10 - 20 June 2019

    Elixir node event
    RaukR, Advanced R for Bioinformatics, Summer course https://tess.elixir-europe.org/events/raukr-advanced-r-for-bioinformatics-summer-course 2019-06-10 09:00:00 UTC 2019-06-20 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Genome assembly and annotation course 5

    1 - 5 July 2019

    Milan, Italy

    Elixir node event
    Genome assembly and annotation course 5 https://tess.elixir-europe.org/events/genome-assembly-and-annotation-course-5 A **genome assembly and annotation course** will take place on **July 1-5, 2019** in **Milan, Italy**, hosted by the Italian ELIXIR Node in cooperation with other ELIXIR nodes that are involved in the ELIXIR-EXCELERATE task 10.3 “Capacity Building in Genome Assembly and Annotation”. Some of the most experienced assembly and annotation experts in Europe will be teaching at the course. The course is aimed at researchers interested in learning more about genome assembly and annotation. It will include information useful for both the beginner and the more advanced user. We will start by introducing general concepts and then continue with a step-by-step description of all major components of a genome assembly and annotation workflow, from raw data all the way to a final assembled and annotated genome. There will be a mix of lectures and hands-on practical exercises using Unix/Linux command line. After the course, the participants will have knowledge of commonly used assembly practices and tools. They will be able to run assembly and annotation projects on their own. **Prerequisites:** - **Working knowledge of Unix/Linux command line** - **As part of the course agenda, course participants will prepare a short presentation about their own projects.** Optionally, they may also bring their own data. **Instructions how to register for the course are available on the [ELIXIR-SI eLearning Platform (EELP)](https://elixir.mf.uni-lj.si/course/view.php?id=45).** You will be able to access the course after you register and your registration is approved by the course organizers. 2019-07-01 09:00:00 UTC 2019-07-05 17:00:00 UTC ELIXIR Italy University of Milano-Bicocca, Building U7, Lab 715, Milan, Italy University of Milano-Bicocca, Building U7, Lab 715 Milan Città Metropolitana di Milano Italy Genomics University of Milano-Bicocca, Italy General questions: gianluca.dellavedova@unimib.it Questions about the course agenda: henrik.lantz@nbis.se National Research Council of ItalyINRANBIS - National Bioinformatics Infrastructure SwedenELIXIR EXCELERATE life scientistsResearchersPhD students 24 workshops_and_courses registration_of_interest Genomics AssemblyTrainingeLearningEeLP
  • NBIS course: Epigenomics data analysis

    26 - 31 August 2019

    Elixir node event
    NBIS course: Epigenomics data analysis https://tess.elixir-europe.org/events/nbis-course-prel-chip-seq-data-analysis More information will follow contact: olga.dethlefsen@nbis.se or agata.smialowska@nbis.se contact: education@nbis.se 2019-08-26 09:00:00 UTC 2019-08-31 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Epigenomics data analysis

    26 - 30 August 2019

    Elixir node event
    Epigenomics data analysis https://tess.elixir-europe.org/events/epigenomics-data-analysis 2019-08-26 09:00:00 UTC 2019-08-30 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • NBIS course: Introduction to Bioinformatics using NGS data

    9 - 14 September 2019

    Elixir node event
    NBIS course: Introduction to Bioinformatics using NGS data https://tess.elixir-europe.org/events/nbis-course-introduction-to-bioinformatics-using-ngs-data More information will follow 2019-09-09 09:00:00 UTC 2019-09-14 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • NBIS course: Data integration, Systems Biology

    9 - 14 September 2019

    Elixir node event
    NBIS course: Data integration, Systems Biology https://tess.elixir-europe.org/events/nbis-course-data-integration-systems-biology More information will follow 2019-09-09 09:00:00 UTC 2019-09-14 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Introduction to Bioinformatics using NGS data, Uppsala

    9 - 13 September 2019

    Elixir node event
    Introduction to Bioinformatics using NGS data, Uppsala https://tess.elixir-europe.org/events/introduction-to-bioinformatics-using-ngs-data-uppsala-b997ea28-3232-4b81-86ea-d071bc3516f6 2019-09-09 09:00:00 UTC 2019-09-13 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • NBIS course: Bioinformatics for Principal Investigators

    17 - 19 September 2019

    Elixir node event
    NBIS course: Bioinformatics for Principal Investigators https://tess.elixir-europe.org/events/nbis-course-bioinformatics-for-principal-investigators More information will follow 2019-09-17 09:00:00 UTC 2019-09-19 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • NBIS course (prel.): Python programming with applications to bioinformatics

    23 - 28 September 2019

    Elixir node event
    NBIS course (prel.): Python programming with applications to bioinformatics https://tess.elixir-europe.org/events/nbis-course-prel-python-programming-with-applications-to-bioinformatics More information will follow contact: education@nbis.se 2019-09-23 09:00:00 UTC 2019-09-28 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • NBIS-SIB collaborative course: single-cell transcriptomics

    13 - 19 October 2019

    Elixir node event
    NBIS-SIB collaborative course: single-cell transcriptomics https://tess.elixir-europe.org/events/nbis-sib-collaborative-course-single-cell-transcriptomics More information will follow contact: education@nbis.se 2019-10-13 09:00:00 UTC 2019-10-19 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
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