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3 events found

Keywords: Metabolomics 

  • Metabolomics Data Processing and Data Analysis

    7 June - 2 July 2021

    Elixir node event
    Metabolomics Data Processing and Data Analysis https://tess.elixir-europe.org/events/metabolomics-data-processing-and-data-analysis-600f05c6-102c-4a4d-bece-76bea2435d8d #Content Overview This online course explores the tools and approaches that are used to process and analyse metabolomics data. You will investigate the challenges that are typically encountered in the analysis of metabolomics data, and provide solutions to overcome these problems. #Topics Covered * An introduction to metabolomics * An overview of the untargeted metabolomics workflow * The influence of experimental design and data acquisition on data analysis and data quality * An overview of processing NMR data * Processing direct infusion mass spectrometry data with a hands-on exercise * Processing liquid chromatography-mass spectrometry data with hands-on exercises * Reporting standards and data repositories * Data analysis, detecting outliers and drift, and pre-treatment methods * Univariate data analysis with a hands-on exercise * Multivariate data analysis (including unsupervised and supervised approaches) with hands-on exercises * The importance of statistical validation of results * Computational approaches for metabolite identification and translation of results into biological knowledge with hands-on exercises * What are the future challenges for data processing and analysis in metabolomics #Software used during the course * Galaxy to process direct infusion mass spectrometry data * XCMS online to process liquid chromatography – mass spectrometry data * MetaboAnalyst in the univariate and multivariate data analysis exercises * Metabolite annotation using PUTMEDID_ID operating in the Taverna workflow environment #Level The course would be ideally suited to MSc / PhD students or scientists who are in the early stages of analysing metabolomics data. No previous knowledge of the data processing and statistical analysis approaches is assumed, but a basic understanding of the metabolome, and the analytical techniques applied in the metabolomics field would be beneficial. A pre-course recommended reading list will be provided. 2021-06-07 09:00:00 UTC 2021-07-02 23:59:00 UTC Metabolomics [] [] [] workshops_and_courses [] MetabolomicsData AnalysisData processing
  • Integrative X-omics Analyses Empowering Personalized Healthcare

    5 - 9 July 2021

    Online

    Elixir node event
    Integrative X-omics Analyses Empowering Personalized Healthcare https://tess.elixir-europe.org/events/integrative-x-omics-analyses-empowering-personalized-healthcare-88018152-cce1-4917-bb6d-508412fecf11 The Netherlands X-omics large scale infrastructure will organize an online course again in the Radboud Summer School 2021: Integrative X-omics Analyses Empowering Personalized Healthcare. This course will take place from 5-9 July 2021. The course consists of lectures, demonstrations and hands-on computer practices for analysis and integration of genomics, proteomics and metabolomics data. In group assignments, you will be designing a X-omics approach towards personalized prevention or treatment. The time zone friendly schedule will allow participants from Africa, Asia, America and Europe to join online. 2021-07-05 09:00:00 UTC 2021-07-09 17:00:00 UTC Online, Online Online Online Radboud university Peter-Bram 't Hoen, Alain van Gool X-omics PhD Students or young researchers in molecular biology and/or genetics with little or no background in bioinformatics. 60 workshops_and_courses [] bioinformaticsGenomicstranscriptomicsProteomicsMetabolomics
  • Workflow4Experimenters

    11 - 15 October 2021

    Toulouse, France

    Workflow4Experimenters https://tess.elixir-europe.org/events/workflow4experimenters-b965b444-1a71-4fd0-952a-5c41b68d50bb During this one-week course, participants will learn how to use the W4M infrastructure to analyze their own dataset. Morning sessions will be dedicated to methodology and tools. Afternoon sessions will be devoted to tutoring. 2021-10-11 12:00:00 UTC 2021-10-15 12:00:00 UTC Workflow4Metabolomics - IFB/ELIXIR-FR and MetaboHUB 180 chemin de Tournefeuille, Toulouse, France 180 chemin de Tournefeuille Toulouse Haute-Garonne France 31000 Metabolomics INRA contact@workflow4metabolomics.org ELIXIR-FR/IFBMetaboHUBRFMFGenotoul BiologistsChemists 20 workshops_and_courses registration_of_interest GalaxyMetabolomics

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