Bacterial Genomes: Disease Outbreaks and Antimicrobial Resistance
31 August 2020 - 3 January 2021Bacterial Genomes: Disease Outbreaks and Antimicrobial Resistance https://coursesandconferences.wellcomegenomecampus.org/our-events/bacterial-genomes-disease-outbreaks-amr-online-mar20-copy/ https://tess.elixir-europe.org/events/bacterial-genomes-disease-outbreaks-and-antimicrobial-resistance-2aa0df3a-e74c-4f5c-acc3-8c2ee0847f71 # Overview * **Duration**: 3 weeks, 3 hours per week * Free * Certificate of achievement available on satisfactory completion * **CPD Approval**: Royal College of Pathologists (9 credits), Royal College of Nursing (9 credits) * **Start Date**: The course is run ‘live’ for 3 weeks from the start date above. Once this period is over there will be no live monitoring of the forums, but you can still join and complete the course during the remaining period. ### Why join the course? The increase in resistance of harmful bacteria to antibiotics is a major global threat to health. Here we explore bacterial genomes and the use of genome sequencing to identify and track these drug resistant bacteria. Join us to discover how genome research is helping scientists and healthcare professionals track disease outbreaks and prevent the rise of antibiotic resistant ‘superbugs’. ### Who is the course for? This course will be of interest to scientists, healthcare professionals, biomedical researchers and bioinformaticians. The course offers all learners an opportunity to learn about genomes, disease, and antimicrobial resistance. You require no previous knowledge of genome science to complete the course. ### What do people say about this course? "_I would definitely point students to this resource. Text, videos, and figures were all very well done._" Pablo Tsukayama, Assistant Professor of Microbiology "_A highlight of the course was the introduction to whole genome sequencing – new information for me._" Christine Laws, Medical Doctor “_Exchanging genetic information quickly throughout the world is clearly going to revolutionise the ability to combat disease._” Prue van der Hoorn, Artist # Programme and start dates ### Course start dates This course is repeated twice a year. ### What topics will you cover? * Diseases caused by bacteria * What bacterial genomes look like * Genome sequencing technology * Mechanisms of transmission and resistance * Genomic epidemiology – tracking the spread of bacterial pathogens * Antimicrobial resistance ### What will you achieve? By the end of the course, you'll be able to... * Explain why some bacteria are pathogenic * Explore the structure of bacterial genomes * Describe the uses of different genome sequencing technologies * Investigate how genome data are used to track the spread of bacterial disease * Discuss the role of genome sequencing in stopping the spread of antimicrobial resistance # Educators ## **Lead Educators** **[Dr Adam Reid]** I am a senior staff scientist at the Wellcome Sanger Institute near Cambridge in the United Kingdom. I'm interested in using genomics and bioinformatics to better understand infectious diseases. **[Dr Josie Bryant]** I am a Henry Wellcome Postdoctoral Fellow in the University of Cambridge, Department of Medicine. I am working on bacterial genomics and evolution with a focus on within-patient microbial diversity ### Dr Francesca Short I am a scientist at the Wellcome Sanger Institute. I am interested in using functional genomics techniques to understand infections caused by the bacterium _Klebsiella pneumoniae_. ## **Programme Lead Educator** **[Professor Nicholas Thomson]** I am a Group Leader at the Wellcome Sanger Institute. I provide scientific oversight for this course. I am interested in bacterial evolution and the spread of infectious disease. ### The course also features interviews with distinguished scientists, including: * **[Mathew Beale]** - Wellcome Sanger Institute * **[Daryl Domman]** - Wellcome Sanger Institute * **[Gal Horesh]** - Wellcome Sanger Institute * **[Catherine Ludden]** - London School of Hygiene and Tropical Medicine * **[Tapoka Mkandawire]** - Wellcome Sanger Institute * **[Julian Parkhill]** - Wellcome Sanger Institute * **Lindsay Pike** - Wellcome Sanger Institute * **[Michael Quail]** - Wellcome Sanger Institute * **[Susannah J. Salter]** - Wellcome Sanger Institute * **[Estee Torok]** - Addenbrooke’s Hospital and University of Cambridge : http://www.sanger.ac.uk/people/directory/reid-adam-james : https://www.infectiousdisease.cam.ac.uk/directory/josie-bryant : http://www.sanger.ac.uk/people/directory/thomson-nicholas-robert : http://www.sanger.ac.uk/people/directory/beale-mathew : http://www.sanger.ac.uk/people/directory/domman-daryl : http://www.sanger.ac.uk/people/directory/horesh-gal : https://www.lshtm.ac.uk/aboutus/people/ludden.catherine : http://www.sanger.ac.uk/people/directory/mkandawire-tapoka-t : http://www.sanger.ac.uk/people/directory/parkhill-julian : http://www.sanger.ac.uk/people/directory/quail-michael-andrew : http://www.sanger.ac.uk/people/directory/salter-susannah-j : https://firstname.lastname@example.org # What's Included Wellcome Genome Campus Advanced Courses and Scientific Conferences are offering everyone who joins this course a free digital upgrade, so that you can experience the full benefits of studying online for free. This means that you get: * Unlimited access to this course * Includes any articles, videos, peer reviews and quizzes * Tests to validate your learning * A PDF Certificate of Achievement to prove your success when you’re eligible # CDP Approval 2020-08-31 09:00:00 UTC 2021-01-03 23:59:59 UTC Wellcome Genome Campus - Advanced Courses  email@example.com   workshops_and_courses  bacterialgenomesAMRHDRUK
Data Management Planning workshop for Life Science Projects - Trondheim
30 November - 1 December 2020Data Management Planning workshop for Life Science Projects - Trondheim https://www.digitallifenorway.org/events/data-management-planning-workshop-for-life-science-projects-trondheim.html https://tess.elixir-europe.org/events/data-management-planning-workshop-for-life-science-projects-4e39d168-ea35-4850-9710-2a59d6a8548d We are pleased to announce the Data Management planning workshop for Life Scientists organised in Trondheim by [ELIXIR Norway](https://www.elixir-norway.org/), [Digital Life Norway](https://digitallifenorway.org/) and [Research Data@NTNU](https://innsida.ntnu.no/researchdata). The intended audience are researchers (PhD candidates, Post Doctoral Fellows, Researchers, Associate Professors and Professors) that are planning to submit a grant application for a research project. Max. number of participants is 35. How-to generate a data management plan for a Life Science research project that will meet the requirements of the funding organisations? [Ingrid Heggland](https://www.ntnu.edu/employees/ingrid.heggland) (ResearchData@NTNU), [Ane M Gabrielsen](https://www.ntnu.no/ansatte/ane.gabrielsen) (ResearchData@NTNU), [Heine Skipenes](https://www.ntnu.no/ansatte/heine.skipenes) (Research IT NTNU), [Anne Heidi Skogholt](https://www.ntnu.edu/employees/anne.heidi.skogholt) (NTNU/HUNT-Cloud), [Kjersti Rise](https://www.ntnu.edu/employees/anne.heidi.skogholt) (NTNU/ELIXIR-Norway) and [Korbinian Bösl](https://www.uib.no/en/persons/Korbinian.Boesl) (UiB/ELIXIR-Norway/Centre for Digital Life Norway) ## Course content: #### 30.11.2020 ##### 0900 - 0915 Introduction ##### 0915 - 0945 Requirements from institutions & funding bodies NTNU H2020/ERC Research Council Norway ##### 0945 - 1015 Information on national and local storage infrastructures NeLS/StoreBioInfo NIRD NTNU Computing & Storage resources TSD HUNT-Cloud NICE-1 ##### 1015 - 1030 Short break ##### 1030 - 1230 Relevant deposition repositories/ data archives domain specific archives (ELIXIR/EMBL-EBI, NCBI) NIRD archive NTNU Open Research Data/ DataverseNO NSD #### 1.12.2020 ##### 0900 - 1000 GDPR and other legal requirements for research on humans Health Research Act Personal Data Act ##### 1000 - 1015 Short break ##### 1015 - 1045 Licensing of data, biological material and software ##### 1045 - 1300 Hands on training and assistance to generate a data management plan #### Requirements: Join us online and bring your research project if you have one. You will get the opportunity to set up a data management plan for your project with help of the [Data Steward Wizard tool](https://elixir-no.ds-wizard.org/dashboard) using a structured and detailed questionnaire with references to relevant resources. [Register before 25 November 2020](https://skjemaker.app.uib.no/view.php?id=9329496) 2020-11-30 09:00:00 UTC 2020-12-01 13:00:00 UTC ELIXIR Norway, Centre for Digital Life Norway and Research Data@NTNU Data management Data security Data submission, annotation and curation Norwegian University of Science and Technology firstname.lastname@example.org Centre for Digital Life Norway (DLN) PhD studentsPost DocsAll postgraduatesProfessors 35 workshops_and_courses first_come_first_served DMPData management plandata management
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